New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2047257 | 52 (1.010) | 3 (0.060) | 3/250 | NT | 5.5% | coding (764/1197 nt) | PP_1820 | benzoate transport protein |
? | NC_002947 | = 2047296 | 53 (1.070) | coding (725/1197 nt) | PP_1820 | benzoate transport protein |
ACCACACCGCCGCGGTGTAGCGTTTGGCCGGGTCTTCATGGGCATGCGGCCCGGTGCAGATCGCCGCGCTGATCGCCGCCAGGTTGACCCCATGCGAGCCGAACGGCGCCAGCAGCAGCGAGGCAAAGCCGGTGGCCGAAATCAGCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2047108‑2047257 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgTGGCCGTCCTGCGTGCCGACGGCTACCAGGTACCGGCCTCGCCGCTGATTTCGGCCACCGGCTTTGCCTCGCTGCTGCTGGCGCCGTTCGGCTCGCATGGGGTCAACCTGGCGGCGATCAGCGCGGCGATCTGCACCGGGCCGCATGC < NC_002947/2047296‑2047149 ACCACACCGCCGCGGTGTAGCGTTTGGCCGGGTCTTCATGGGCATGCGGCCCGGTGCAGATCGCCGCGCTGATCGCCGCCAGGTTGACCCCATGCGAGCCGAACGGCGCCAGCAGCAGCGAGGCAAAGCCGGTGGCCGAAATCAGCGGC < 3:42098/149‑1 ACCACACCGCCGCGGTGTAGCGTTTGGCCGGGTCTTCATGGGCATGCGGCCCGGTGCAGATCGCCGCGCTGATCGCCGCCAGGTTGACCCCATGCGAGCCGAACGGCGCCAGCAGCAGCGAGGCAAAGCCGGTGGCCGAAATCAGCGGC < 7:93833/149‑1 TGCGGCCCGGTGCAGATCGCCGCGCTGATCGCCGCCAGGTTGACCCCATGCGAGCCGAACGGCGCCAGCAGCAGCGAGGCAAAGCCGGTGGCCGAAATCAGCGGCGTGGCCGTCCTGCGTGCCGACGGCTACCAGGTACCGGCCTCGCC < 2:263849/149‑1 CCCCATGCGAGCCGAACGGCGCCAGCAGCAGCGAGGCAAAGCCGGTGGCCGAAATCAGCGGCGTGGCCGTCCTGCGTGCCGACGGCTACCAGGTACCGGCC < 1:88851/101‑1 CCCCATGCGAGCCGAACGGCGCCAGCAGCAGCGAGGCAAAGCCGGTGGCCGAAATCAGCGGCGTGGCCGTCCTGCGTGCCGACGGCTACCAGGTACCGGCC > 2:88851/1‑101 GTGGCCGTCCTGCGTGCCGACGGCTACCAGGTACCGGCCTCGCCGCTGATTTCGGCCACCGGCTTTGCCTCGCTGCTGCTGGCGCCGTTCGGCTCGCATGGGGTCAACCTGGCGGCGATCAGCGCGGCGATCTGCACCGGGCCGCATGC < 8:39591/149‑1 ACCACACCGCCGCGGTGTAGCGTTTGGCCGGGTCTTCATGGGCATGCGGCCCGGTGCAGATCGCCGCGCTGATCGCCGCCAGGTTGACCCCATGCGAGCCGAACGGCGCCAGCAGCAGCGAGGCAAAGCCGGTGGCCGAAATCAGCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2047108‑2047257 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgTGGCCGTCCTGCGTGCCGACGGCTACCAGGTACCGGCCTCGCCGCTGATTTCGGCCACCGGCTTTGCCTCGCTGCTGCTGGCGCCGTTCGGCTCGCATGGGGTCAACCTGGCGGCGATCAGCGCGGCGATCTGCACCGGGCCGCATGC < NC_002947/2047296‑2047149 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |