New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2764604 | 39 (0.760) | 3 (0.060) | 3/248 | NT | 7.3% | coding (398/1095 nt) | PP_2418 | cobalamin ABC transporter substrate‑binding protein |
? | NC_002947 | = 2764631 | 39 (0.790) | coding (371/1095 nt) | PP_2418 | cobalamin ABC transporter substrate‑binding protein |
GCAGGCGGGTGCCGTCTGCACCGACCAGGTTGTCCTTGCCCTCGCAGTCCGATGGCAGCACGTAGGTGGGGATCTTCAGCTCATCGAACTGCTCGCGGGTGGCGACCACGCCCTGGGCACCGACCATCCATTCGAACTGCGCCGCGACCAGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2764452‑2764604 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagctTCGAGGCGGTGGTCGGCAAGCGCCCGCAGCTGGTCGCGGCGCAGTTCGAATGGATGGTCGGTGCCCAGGGCGTGGTCGCCACCCGCGAGCAGTTCGATGAGCTGAAGATCCCCACCTACGTGCTGCCATCGGACTGCGAGGGCAAGGA < NC_002947/2764631‑2764484 GCAGGCGGGTGCCGTCTGCACCGACCAGGTTGTCCTTGCCCTCGCAGTCCGATGGCAGCACGTAGGTGGGGATCTTCAGCTCATCGAACTGCTCGCGGGTGGCGACCACGCCCTGGGCACCGACCATCCATTCGAACTGCGCCGCGAC > 1:219299/1‑148 GCGGGTGCCGTCTGCACCGACCAGGTTGTCCTTGCCCTCGCAGTCCGATGGCAGCACGTAGGTGGGGATCTTCAGCTCATCGAACTGCTCGCGGGTGGCGACCACGCCCTGGGCACCGATCATCCATTCGAACTGCGCCGCGACCAGCT > 1:155541/1‑149 GCGGGTGCCGTCTGCACCGACCAGGTTGTCCTTGCCCTCGCAGTCCGATGGCAGCACGTAGGTGGGGATCTTCAGCTCATCGAACTGCTCGCGGGTGGCGACCACGCCCTGGGCACCGACCATCCATTCGAACTGCGCCGCGACCAGCT > 6:156797/1‑149 CTCGCAGTCCGATGGCAGCACGTAGGTGGGGATCTTCAGCTCATCGAACTGCTCGCGGGTGGCGACCACGCCCTGGGCACCGACCATCCATTCGAACTGCGCCGCGACCAGCTTCGAGGCGGTGGTCGGCAAGCGCCCGCAGCTGGTCG < 6:107705/149‑1 CGATGGCAGCACGTAGGTGGGGATCTTCAGCTCATCGAACTGCTCGCGGGTGGCGACCACGCCCTGGGCACCGACCATCCATTCGAACTGCGCCGCGACCAGCTTCGAGGCGGTGGTCGGCAAGCGCCCGCAGCTGGT < 3:162944/138‑1 CGATGGCAGCACGTAGGTGGGGATCTTCAGCTCATCGAACTGCTCGCGGGTGGCGACCACGCCCTGGGCACCGACCATCCATTCGAACTGCGCCGCGACCAGCTTCGAGGCGGTGGTCGGCAAGCGCCCGCAGCTGGT > 4:162944/1‑138 CAGCTTCGAGGCGGTGGTCGGCAAGCGCCCGCAGCTGGTCGCGGCGCAGTTCGAATGGATGGTCGGTGCCCAGGGCGTGGTCGCCACCCGCGAGCAGTTCGATGAGCTGAAGATCCCCACCTACGTGCTGCCATCGGACTGCGAGGGC > 2:235901/1‑148 CAGCTTCGAGGCGGTGGTCGGCAAGCGCCCGCAGCTGGTCGCGGCGCAGTTCGAATGGATGGTCGGTGCCCAGGGCGTGGTCGCCACCCGCGAGCAGTTCGATGAGCTGAAGATCCCCACCTACGTGCTGCCATCGGACTGCGAGGGC > 2:236425/1‑148 AGCTTCGAGGCGGTGGTCGGCAAGCGCCCGCAGCTGGTCGCGGCGCAGTTCGAATGGATGGTCGGTGCCCAGGGCGTGGTCGCCACCCGCGAGCAGTTCGATGAGCTGAAGATCCCCACCTACGTGCTGCCATCGGACTGCGAGGGCAA < 7:182141/149‑1 TTCGAGGCGGTGGTCGGCAAGCGCCCGCAGCTGGTCGCGGCGCAGTTCGAATGGATGGTCGGTGCCCAGGGCGTGGTCGCCACCCGCGAGCAGTTCGATGAGCTGAAGATCCCCACCTACGTGCTGCCATCGGACTGCGAGGGCAAGGA > 2:100427/1‑149 TTCGAGGCGGTGGTCGGCAAGCGCCCGCAGCTGGTCGCGGCGCAGTTCGAATGGATGGTCGGTGCCCAGGGCGTGGTCGCCACCCGCGAGCAGTTCGATGAGCTGAAGATCCCCACCTACGTGCTGCCATCGGACTGCGAGGGCAAG < 1:117043/147‑1 TTCGAGGCGGTGGTCGGCAAGCGCCCGCAGCTGGTCGCGGCGCAGTTCGAATGGATGGTCGGTGCCCAGGGCGTGGTCGCCACCCGCGAGCAGTTCGATGAGCTGAAGATCCCCACCTACGTGCTGCCATCGGACTGCGAGGGCAAG > 2:117043/1‑147 GCAGGCGGGTGCCGTCTGCACCGACCAGGTTGTCCTTGCCCTCGCAGTCCGATGGCAGCACGTAGGTGGGGATCTTCAGCTCATCGAACTGCTCGCGGGTGGCGACCACGCCCTGGGCACCGACCATCCATTCGAACTGCGCCGCGACCAGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2764452‑2764604 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagctTCGAGGCGGTGGTCGGCAAGCGCCCGCAGCTGGTCGCGGCGCAGTTCGAATGGATGGTCGGTGCCCAGGGCGTGGTCGCCACCCGCGAGCAGTTCGATGAGCTGAAGATCCCCACCTACGTGCTGCCATCGGACTGCGAGGGCAAGGA < NC_002947/2764631‑2764484 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |