| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2944810 = | 60 (1.160) | 4 (0.080) | 3/244 | NT | 6.3% | coding (1239/1641 nt) | PP_2577 | paraquat‑inducible protein B |
| ? | NC_002947 | 2944851 = | 63 (1.300) | coding (1280/1641 nt) | PP_2577 | paraquat‑inducible protein B | |||||
GCTGGCGCGCAGCTCACGCAAGCTACCGTCCAGGTTACCGGCGATGCTTTCCAGCGGCAGCTTGGCAATGCGCTCCATCACCCGCTGCAGCTGTTCCTGCAACTGCTCAAGGCTGCCGGGCAGCGTCGGGATCATGATGGGGTCGGCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2944960‑2944810‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcagccTTGAGCAGTTGCAGGAACAGCTGCAGCGGGTGATGGAGCGCATTGCCAAGCTGCCGCTGGAAAGCATCGCCGGTAACCTGGACGGTAGCTTGCGTGAGCTGCGCGCCAGCCTCAGGCAGTTCAATGGCCAGACGCTGCCGGAGGTG > NC_002947/2944851‑2944996 GCTGGCGCGCAGCTCTCGCAAGCTACCGTCCAGGTTACCGGCGATGCTTTCCAGCGGCAGCTTGGCAATGCGCTCCATCACCCGCTGCAGCTGTTCCTGCAACTGCTCAAGGCTGCCGGGCAGCGTCGGGATCATGATGGGTTCGGCAG < 5:233379/149‑1 TGGCGCGCAGCTCACGCAAGCTACCGTCCAGGTTACCGGCGATGCTTTCCAGCGGCAGCTTGGCAATGCGCTCCATCACCCGCTGCAGCTGTTCCTGCAACTGCTCAAGGCTGCCGGGCAGCGTCGGGATCATGATGGGGTCGGCAGC > 2:36241/1‑148 TCCTGCAACTGCTCAAGGCTGCCGGGCAGCGTCGGGATCATGATGGGGTCGGCAGCC > 1:94222/1‑57 TCCTGCAACTGCTCAAGGCTGCCGGGCAGCGTCGGGATCATGATGGGGTCGGCAGCC < 2:94222/57‑1 AGGCTGCCGGGCAGCGTCGGGATCATGATGGGGTCGGCAGCCTTGAGCAGTTGCAGGAACAGCTGCAGCGGGTGATGGAGCGCATTGCCAAGCTGCCGCTGGAAAGCATCGCCGGTAACCTGGACGGTAGCTTGCGTGA > 5:180308/1‑139 AGGCTGCCGGGCAGCGTCGGGATCATGATGGGGTCGGCAGCCTTGAGCAGTTGCAGGAACAGCTGCAGCGGGTGATGGAGCGCATTGCCAAGCTGCCGCTGGAAAGCATCGCCGGTAACCTGGACGGTAGCTTGCGTGA < 6:180308/139‑1 GGCTGCCGGGCAGCGTCGGGATCATGATGGGGTCGGCAGCCTTGCGCAGTTGCAGGAACAGCTGCAGCGGGTGATGGCGCGGATTGCCAAGCTGCCGCTGGAAAGCATCGCCGGTAACCTGGACGGTAGCTTGCGTGAGCTGCGCGC > 8:219402/1‑147 GGCTGCCGGGCAGCGTCGGGATCATGATGGGGTCGGCAGCCTTGAGCAGTTGCAGGAACAGCTGCAGCGGGTGATGGAGCGCATTGCCAAGCTGCCGCTGGAAAGCATCGCCGGTAACCTGGACGGTAGCTTGCGTGAGCTGCGCGC > 3:88509/1‑147 CGGCAGCCTTGAGCAGTTGCAGGAACAGCTGCAGCGGGTGATGGAGCGCATTGCCAAGCTGCCGCTGGAAAGCATCGCCGGTAACCTGGACGGTAGCTTGCGTGAGCTGCGCGCCAGCCTCAGGCAGTTCAATGGCCAGACGCTGCCGG < 3:161331/149‑1 AGCCTTGAGCAGTTGCAGGAACAGCTGCAGCGGGTGATGGAGCGCATTGCCAAGCTGCCGCTGGAAAGCATCGCCGGTAACCTGGACGGTAGCTTGCGTGAGCTGCGCGCCAGCCTCAGGCAGTTCAATGGCCAGACGCTGCCGGAGGT > 6:225780/1‑149 GCCTTGAGCAGTTGCAGGAACAGCTGCAGCGGGTGATGGAGCGCATTGCCAAGCTGCCGCTGGAAAGCATCGCCGGTAACCTGGACGGTAGCTTGCGTGAGCTGCGCGCCAGCCTCAGGCAGTTCAATGGCCAGACGCTGCCGGAGGTG < 6:1842/149‑1 CCTTGAGTAGTTGCAGGAACAGCTGCAGCGGGTGATGGAGCGCATTGCCAAGCTGCCGCTGGAAAGCATCGCCGGTAACCTGGACGGTAGCTTGCGTGAGCTGCGCGCCAGCCTCAGGCAGTTCAATGGCCAGACGCTGCCGGAGGTG > 8:143980/1‑148 GCTGGCGCGCAGCTCACGCAAGCTACCGTCCAGGTTACCGGCGATGCTTTCCAGCGGCAGCTTGGCAATGCGCTCCATCACCCGCTGCAGCTGTTCCTGCAACTGCTCAAGGCTGCCGGGCAGCGTCGGGATCATGATGGGGTCGGCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2944960‑2944810‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcagccTTGAGCAGTTGCAGGAACAGCTGCAGCGGGTGATGGAGCGCATTGCCAAGCTGCCGCTGGAAAGCATCGCCGGTAACCTGGACGGTAGCTTGCGTGAGCTGCGCGCCAGCCTCAGGCAGTTCAATGGCCAGACGCTGCCGGAGGTG > NC_002947/2944851‑2944996 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |