| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3027469 | 44 (0.850) | 4 (0.080) | 4/244 | NT | 8.9% | coding (834/1491 nt) | PP_2642 | GntR family transcriptional regulator |
| ? | NC_002947 | = 3027531 | 41 (0.850) | coding (896/1491 nt) | PP_2642 | GntR family transcriptional regulator | |||||
CCCCCTGCCTGGGAGATCTTCCGTCAGCTGGGTGCCCGCCTGGTGACCGTGGAGCTGGACCATGAGGGTTGCCGGGTCGACCAGCTCGATGCCCTGTGCCGGCAGCACAAGGTGCGGATGATGTACATAACGCCCCATCACCAGTTCCCGACCACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3027314‑3027469‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaccacgCAAAAGGCATGCTGGCGCGCCAGCTCCAGCAGCTGTTGCCTGCGCCCGGCTGGCAGGCTGACCGTGGTCGGGAACTGGTGATGGGGCGTTATGTACATCATCCGCACCTTGTGCTGCCGGCACAGGGCATCGAGCTGGTCGACCCGG < NC_002947/3027531‑3027385 CCCCCTGCCTGGGAGATCTTCCGTCAGCTGGGTGCCCGCCTGGTGACCGTGGAGCTGGACCATGAGGGTTGCCGGGTCGACCAGCTCGATGCCCTGTGCCGGCAGCACAAGGTGCGGATGATGTACATAACGCCCCATCACCAGTTCCC > 3:122146/1‑149CCCCCTGCCTGGGAGATCTTCCGTCAGCTGGGTGCCCGCCTGGTGACCGTGGAGCTGGACCATGAGGGTTGCCGGGTCGACCAGCTCGATGCCCTGTGCCGGCAGCACAAGGTGCGGATGATGTACATAACGCCCCATCACCAGTTCCC < 3:20642/149‑1 CCCTGCCTGGGAGATCTTCCGTCAGCTGGGTGCCCGCCTGGTGACCGTGGAGCTGGACCATGAGGGTTGCCGGGTCGACCAGCTCGATGCCCTGTGCCGGCAGCACAAGGTGCGGATGATGTACATAACGCCCCATCACCAGTTCCCGA > 2:151258/1‑149 CCTGGGAGATCTTCCGTCAGCTGGGTGCCCGCCTGGTGACCGTGGAGCTGGACCATGAGGGTTGCCGGGTCGACCAGCTCGATGCCCTGTGCCGGCAGCACAAGGTGCGGATGATGTACATAACGCCCCATCACCAGTTCCCGACCACG > 3:112376/1‑149 CGTGGAGCTGGACCATGAGGGTTGCCGGGTCGACCAGCTCGATGCCCTGTGCCGGCAGCACAAGGTGCGGATGATGTACATAACGCCCCATCACCAGTTCCCGACCACGCAAAAGGCATGCTGGCGCGCCAGCTCCAGCAGCTGTTGCC > 3:201529/1‑149 GACCAGCTCGATGCCCTGTGCCGGCAGCACAAGGTGCGGATGATGTACATAACGCCCCATCACCAGTTCCCGACCACGCAAAAGGCATGCTGGCGCGCCAGCTCCAGCAGCTGTTGCCTGCGCCCGGCTGGCAGGCTGACCGTGGTCGG < 4:201529/149‑1 ACCAGCTCGATGCCCTGTGCCGGCAGCACAAGGTGCGGATGATGTACATAACGCCCCATCACCAGTTCCCGACCACGCAAAAGGCATGCTGGCGCGCCAGCTCCAGCAGCTGTTGCCTGCGCCCGGCTGGCAGGCTGACCGTGGTCGG > 2:79579/1‑148 CAGCTCGATGCCCTGTGCCGGCAGCACAAGGTGCGGATGATGTACATAACGCCCCATCACCAGTTCCCGACCACGCAAAAGGCATGCTGGCGCGCCAGCTCCAGCAGCTGTTGCCTGCGCCCGGCTGGCAGGCTGACCGTGGTCGGGAA < 1:79579/149‑1 ACCACGCAAAAGGCATGCTGGCGCGCCAGCTCCAGCAGCTGTTGCCTGCGCCCGGCTGGCAGGCTGACCGTGGTCGGGAACTGGTGATGGGGCGTTATGTACATCATCCGCACCTTGTGCTGCCGGCACAGGGCATCGAGCTGGTCGAC > 1:151258/1‑149 CACGCAAAAGGCATGCTGGCGCGCCAGCTCCAGCAGCTGTTGCCTGCGCCCGGCTGGCAGGCTGACCGTGGTCGGGAACTGGTGATGGGGCGTTATGTACATCATCCGCACCTTGTGCTGCCGGCACAGGGCATCGAGCTGGTCGACCC > 2:328368/1‑149 GCAAAAGGCATGCTGGCGCGCCAGCTCCAGCAGCTGTTGCCTGCGCCCGGCTGGCAGGCTGACCGTGGTCGGGAACTGGTGATGGGGCGTTATGTACATCATCCGCACCTTGTGCTGCCGGCACAGGGCATCGAGCTGGTCGACCCGG > 2:177367/1‑148 GCAAAAGGCATGCTGGCGCGCCAGCTCCAGCAGCTGTTGCCTGCGCCCGGCTGGCAGGCTGACCGTGGTCGGGAACTGGTGATGGGGCGTTATGTACATCATCCGCACCTTGTGCTGCCGGCACAGGGCATCGAGCTGGTCGACCCGG > 6:40638/1‑148 CCCCCTGCCTGGGAGATCTTCCGTCAGCTGGGTGCCCGCCTGGTGACCGTGGAGCTGGACCATGAGGGTTGCCGGGTCGACCAGCTCGATGCCCTGTGCCGGCAGCACAAGGTGCGGATGATGTACATAACGCCCCATCACCAGTTCCCGACCACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3027314‑3027469‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaccacgCAAAAGGCATGCTGGCGCGCCAGCTCCAGCAGCTGTTGCCTGCGCCCGGCTGGCAGGCTGACCGTGGTCGGGAACTGGTGATGGGGCGTTATGTACATCATCCGCACCTTGTGCTGCCGGCACAGGGCATCGAGCTGGTCGACCCGG < NC_002947/3027531‑3027385 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |