New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3027469	44 (0.850)	4 (0.080)	4/244	NT	8.9%	coding (834/1491 nt)	PP_2642	GntR family transcriptional regulator
	?	NC_002947	= 3027531	41 (0.850)					coding (896/1491 nt)	PP_2642	GntR family transcriptional regulator

CCGGGTCGACCAGCTCGATGCCCTGTGCCGGCAGCACAAGGTGCGGATGATGTACATAACGCCCCATCACCAGTTCCCGACCACGGTCAGCCTGCCAGCCGGGCGCAGGCAACAGCTGCTGGAGCTGGCGCGCCAGCATGCCTTTTGCGTGGTCGAAGAGGATTACGACTACGAATACCACTTTGCCGGGCGGCCCTATCTGCCTTTGGCCAGCGACCGCCAGCAGCGGCACGTGATTTACATTGGCTCACTGTCCAAGCCTTTGGGCAGCACGTTTCGTTGCAGCTA  >  NC_002947/3027385‑3027672                                                                                                                                                   |                                                                                                                                              ccGGGTCGACCAGCTCGATGCCCTGTGCCGGCAGCACAAGGTGCGGATGATGTACATAACGCCCCATCACCAGTTCCCGACCACGGTCAGCCTGCCAGCCGGGCGCAGGCAACAGCTGCTGGAGCTGGCGCGCCAGCATGCCTTTTGc                                                                                                                                              >  6:40638‑M2/1‑147 (MQ=255) ccGGGTCGACCAGCTCGATGCCCTGTGCCGGCAGCACAAGGTGCGGATGATGTACATAACGCCCCATCACCAGTTCCCGACCACGGTCAGCCTGCCAGCCGGGCGCAGGCAACAGCTGCTGGAGCTGGCGCGCCAGCATGCCTTTTGc                                                                                                                                              >  2:177367‑M2/1‑147 (MQ=255)   gggTCGACCAGCTCGATGCCCTGTGCCGGCAGCACAAGGTGCGGATGATGTACATAACGCCCCATCACCAGTTCCCGACCACGGTCAGCCTGCCAGCCGGGCGCAGGCAACAGCTGCTGGAGCTGGCGCGCCAGCATGCCTTTTGcgtg                                                                                                                                           >  2:328368‑M2/1‑145 (MQ=255)     gTCGACCAGCTCGATGCCCTGTGCCGGCAGCACAAGGTGCGGATGATGTACATAACGCCCCATCACCAGTTCCCGACCACGGTCAGCCTGCCAGCCGGGCGCAGGCAACAGCTGCTGGAGCTGGCGCGCCAGCATGCCTTTTGcgtggt                                                                                                                                         >  1:151258‑M2/1‑143 (MQ=255)                 gATGCCCTGTGCCGGCAGCACAAGGTGCGGATGATGTACATAACGCCCCATCACCAGTTCCCGACCACGGTCAGCCTGCCAGCCGGGCGCAGGCAACAGCTGCTGGAGCTGGCGCGCCAGCATGCCTTTTGCGTGGTCGAAGAGGATTa                                                                                                                             >  4:17448/1‑149 (MQ=255)                     cccTGTGCCGGCAGCACAAGGTGCGGATGATGTACATAACGCCCCATCACCAGTTCCCGACCACGGTCAGCCTGCCAGCCGGGCGCAGGCAACAGCTGCTGGAGCTGGCGCGCCAGCATGCCTTTTGCGTGGTCGAAGAGGATTACGAc                                                                                                                         <  6:128026/149‑1 (MQ=255)                          tgCCGGCAGCACAAGGTGCTGATGATGTACTTAACGCCCCATCATCAGTTCCCGACCACGGTCAGCCTGCCAGCCGGGCGCAGGCAACAGCTGCTGGAGCTGGCGCGCCAGCATGCCTTTTGCGTGGTCGAAGAGGATTACGACTAc                                                                                                                      <  5:254477/147‑1 (MQ=255)                          tgCCGGCAGCACAAGGTGCGGATGATGTACATAACGCCCCATCACCAGTTCCCGACCACGGTCAGCCTGCCAGCCGGGCGCAGGCAACAGCTGCTGGAGCTGGCGCGCCAGCATGCCTTTTGCGTGGTCGAAGAGGATTACGACTAc                                                                                                                      <  1:227370/147‑1 (MQ=255)                                  gcaCAAGGTGCGGATGATGTACATAACGCCCCATCACCAGTTCCCGACCACGGTCAGCCTGCCAGCCGGGCGCAGGCAACAGCTGCTGGAGCTGGCGCGCCAGCATGCCTTTTGCGTGGTCGAAGAGGATTACGACTACGAATACCACt                                                                                                            >  5:65070/1‑149 (MQ=255)                                   cacaAGGTGCGGATGATGTACATAACGCCCCATCACCAGTTCCCGACCACGGTCAGCCTGCCAGCCGGGCGCAGGCAACAGCTGCTGGAGCTGGCGCGCCAGCATGCCTTTTGCGTGGTCGAAGAGGATTACGACTACGAATACCACtt                                                                                                           >  1:14466/1‑149 (MQ=255)                                    acaAGGTGCGGATGATGTACATAACGCCCCATCACCAGTTCCCGACCACGGTCAGCCTGCCAGCCGGGCGCAGGCAACAGCTGCTGGAGCTGGCGCGCCAGCATGCCTTTTGCGTGGTCGAAGAGGATTACGACTACGAATACCACttt                                                                                                          >  7:55010/1‑149 (MQ=255)                                    acaAGGTGCGGATGATGTACATAACGCCCCATCACCAGTTCCCGACCACGGTCAGCCTGCCAGCCGGGCGCAGGCAACAGCTGCTGGAGCTGGCGCGCCAGCATGCCTTTTGCGTGGTCGAAGAGGATTACGACTACGAATACCACttt                                                                                                          <  6:317726/149‑1 (MQ=255)                                         gTGCGGATGATGTACATAACGCCCCATCACCAGTTCCCGACCACGGTCAGCCTGCCAGCCGGGCGCAGGCAACAGCTGCTGGAGCTGGCGCGCCAGCATGCCTTTTGCGTGGTCGAAGAGGATTACGACTACGAATACCACTTTGCCgg                                                                                                     >  3:58111/1‑149 (MQ=255)                                            cGGATGATGTACATAACGCCCCATCACCAGTTCCCGACCACGGTCAGCCTGCCAGCCGGGCGCAGGCAACAGCTGCTGGAGCTGGCGCGCCAGCATGCCTTTTGCGTGGTCGAAGAGGATTACGACTACGAATACCACTTTGCCGggcg                                                                                                  >  4:311402/1‑149 (MQ=255)                                            cGGATGATGTACATAACGCCCCATCACCAGTTCCCGACCACGGTCAGCCTGCCAGCCGGGCGCAGGCAACAGCTGCTGGAGCTGGCGCGCCAGCATGCCTTTTGCGTGGTCGAAGAGGATTACGACTACGAATACCACTTTGCCGggcg                                                                                                  <  8:55010/149‑1 (MQ=255)                                              gatgatGTACATAACGCCCCATCACCAGTTCCCGACCACGGTCAGCCTGCCAGCCGGGCGCAGGCAACAGCTGCTGGAGCTGGCGCGCCAGCATGCCTTTTGCGTGGTCGAAGAGGATTACGACTACGAATACCACTTTGCCGggcggc                                                                                                >  6:2534/1‑149 (MQ=255)                                                         tAACGCCCCATCACCAGTTCCCGACCACGGTCAGCCTGCCAGCCGGGCGCAGGCAACAGCTGCTGGAGCTGGCGCGCCAGCATGCCTTTTGCGTGGTCGAAGAGGATTACGACTACGAATACCACTTTGCCGGGCGGCCCTATCTGCCt                                                                                     <  4:313963/149‑1 (MQ=255)                                                          aaCGCCCCATCACCAGTTCCCGACCACGGTCAGCCTGCCAGCCGGGCGCAGGCAACAGCTGCTGGAGCTGGCGCGCCAGCATGCCTTTTGCGTGGTCGAAGAGGATTACGACTACGAATACCACTTTGCCGGGCGGCCCTATc                                                                                          <  7:238565/143‑1 (MQ=255)                                                          aaCGCCCCATCACCAGTTCCCGACCACGGTCAGCCTGCCAGCCGGGCGCAGGCAACAGCTGCTGGAGCTGGCGCGCCAGCATGCCTTTTGCGTGGTCGAAGAGGATTACGACTACGAATACCACTTTGCCGGGCGGCCCTATc                                                                                          >  8:238565/1‑143 (MQ=255)                                                            cGCCCCATCACCAGTTCCCGACCACGGTCAGCCTGCCAGCCGGGCGCAGGCAACAGCTGCTGGAGCTGGCGCGCCAGCATGCCTTTTGCGTGGTCGAAGAGGATTACGACTACGAATACCACTTTGCCGGGCGGCCCTATCTGCCTTTg                                                                                  <  4:114927/149‑1 (MQ=255)                                                                  aTCACCAGTTCCCGACCACGGTCAGCCTGCCAGCCGGGCGCAGGCAACAGCTGCTGGAGCTGGCGCGCCAGCATGCCTTTTGCGTGGTCGAAGAGGATTACGACTACGAATACCACTTTGCCGGGCGGCCCTATCTGCCTTTGGACAGc                                                                            >  7:90196/1‑149 (MQ=255)                                                                        aGTTCCCGACCACGGTCAGCCTGCCAGCCGGGCGCAGGCAACAGCTGCTGGAGCTGGCGCGCCAGCATGCCTTTTGCGTGGTCGAAGAGGATTACGACTACGAATACCACTTTGCCGGGCGGCCCTATCTGCCTTTGGCCAGCGACCGc                                                                      >  7:223505/1‑149 (MQ=255)                                                                          ttCCCGACCACGGTCAGCCTGCCAGCCGGGCGCAGGCAACAGCTGCTGGAGCTGGCGCGCCAGCATGCCTTTTGcgtggtcgggaactggtgatggggcgttatgtacatcatccgcaccttgtgctgccggcacagggcatcgagctg                                                                    <  1:79579‑M2/149‑76 (MQ=255)                                                                          ttCCCGACCACGGTCAGCCTGCCAGCCGGGCGCAGGCAACAGCTGCTGGAGCTGGCGCGCCAGCATGCCTTTTGCGTGGTCGAAGAGGATTACGACTACGAATACCACTTTGCCGGGCGGCCCTATCTGCCTTTGGCCAGCGACCGCca                                                                    <  4:58111/149‑1 (MQ=255)                                                                             ccGACCACGGTCAGCCTGCCAGCCGGGCGCAGGCAACAGCTGCTGGAGCTGGCGCGCCAGCATGCCTTTTGcgtggtcgggaactggtgatggggcgttatgtacatcatccgcaccttgtgctgccggcacagggcatcgagctggtc                                                                 <  4:201529‑M2/149‑79 (MQ=255)                                                                             ccGACCACGGTCAGCCTGCCAGCCGGGCGCAGGCAACAGCTGCTGGAGCTGGCGCGCCAGCATGCCTTTTGcgtggtcgggaactggtgatggggcgttatgtacatcatccgcaccttgtgctgccggcacagggcatcgagctggt                                                                  >  2:79579‑M2/1‑71 (MQ=255)                                                                             ccGACCACGGTCAGCCTGCCAGCCGGGCGCAGGCAACAGCTGCTGGAGCTGGCGCGCCAGCATGCCTTTTGCGTGGTCGAAGAGGATTACGACTACGAATACCACTTTGCCGGGCGGCCCTATCTGCCTTTGGCCAGCGACCGCcag                                                                   >  5:104995/1‑147 (MQ=255)                                                                             ccGACCACGGTCAGCCTGCCAGCCGGGCGCAGGCAACAGCTGCTGGAGCTGGCGCGCCAGCATGCCTTTTGCGTGGTCGAAGAGGATTACGACTACGAATACCACTTTGCCGGGCGGCCCTATCTGCCTTTGGCCAGCGACCGCcag                                                                   >  6:299666/1‑147 (MQ=255)                                                                             ccGACCACGGTCAGCCTGCCAGCCGGGCGCAGGCAACAGCTGCTGGAGCTGGCGCGCCAGCATGCCTTTTGCGTGGTCGAAGAGGATTACGACTACGAATACCACTTTGCCGGGCGGCCCTATCTGCCTTTGGCCAGCGACCGCcag                                                                   >  6:294604/1‑147 (MQ=255)                                                                                          gCCTGCCAGCCGGGCGCAGGCAACAGCTGCTGGAGCTGGCGCGCCAGCATGCCTTTTGCGTGGTCGAAGAGGATTACGACTACGAATACCACTTTGCCGGGCGGCCCTATCTGCCTTTGGCCAGCGACCGCCAGCAGCGGCACGTGAtt                                                    <  2:14466/149‑1 (MQ=255)                                                                                           ccTGCCAGCCGGGCGCAGGCAACAGCTGCTGGAGCTGGCGCGCCAGCATGCCTTTTGCGTGGTCGAAGAGGATTACGACTACGAATACCACTTTGCCGGGCGGCCCTATCTGCCTTTGGCCAGCGACCGCCAGCAGCGGCACGTGAtt                                                    >  1:104817/1‑148 (MQ=255)                                                                                                       gcgcAGGCAACAGCTGCTGGAGCTGGCGCGCCAGCATGCCTTTTGCGTGGTCGAAGAGGATTACGACTACGAATACCACTTTGCCGGGCGGCCCTATCTGCCTTTGGCCAGCGACCGCCAGCAGCGGCACGTGATTTACATTGGCTCAc                                       >  7:35632/1‑149 (MQ=255)                                                                                                         gcAGGCAACAGCTGCTGGAGCTGGCGCGCCAGCATGCCTTTTGCGTGGTCGAAGAGGATTACGACTACGAATACCACTTTGCCGGGCGGCCCTATCTGCCTTTGGCCAGCGACCGCCAGCAGCGGCACGTGATTTACATTGGCTCACTg                                     >  5:142993/1‑149 (MQ=255)                                                                                                           aGGCAACAGCTGCTGGAGCTGGCGCGCCAGCATGCCTTTTGCGTGGTCGAAGAGGATTACGACTACGAATACCACTTTGCCGGGCGGCCCTATCTGCCTTTGGCCAGCGACCGCCAGCAGCGGCACGTGATTTACATTGGCTCACTGTc                                   <  6:104995/149‑1 (MQ=255)                                                                                                           aGGCAACAGCTGCTGGAGCTGGCGCGCCAGCATGCCTTTTGCGTGGTCGAAGAGGATTACGACTACGAATACCACTTTGCCGGGCGGCCCTATCTGCCTTTGGCCAGCGACCGCCAGCAGCGGCACGTGATTTACATTGGCTCACTGTc                                   >  2:142335/1‑149 (MQ=255)                                                                                                            ggCAACAGCTGCTGGAGCTGGCGCGCCAGCATGCCTTTTGcgtggtcgggaactggtgatggggcgttatgtacatcatccgcaccttgtgctgccggcacagggcatcgagctggtcgacccggcaaccctcatggtccagctccacg                                  >  3:201529‑M2/1‑40 (MQ=255)                                                                                                                    ctgctgGAGCTGGCGCGCCAGCATGCCTTTTGCGTGGTCGAAGAGGATTACGACTACGAATACCACTTTGCCGGGCGGCCCTATCTGCCTTTGGCCAGCGACCGCCAGCAGCGGCACGTGATTTACATTGGCTCACTGTCCAAGCCttt                          <  6:142993/149‑1 (MQ=255)                                                                                                                       ctgGAGCTGGCGCGCCAGCATGCCTTTTGCGTGGTCGAAGAGGATTACGACTACGAATACCACTTTGCCGGGCGGCCCTATCTGCCTTTGGCCAGCGACCGCCAGCAGCGGCACGTGATTTACATTGGCTCACTGTCCAAGCCTTTg                         <  3:311402/147‑1 (MQ=255)                                                                                                                            gCTGGCGCGCCAGCATGCCTTTTGCGTGGTCGAAGAGGATTACGACTACGAATACCACTTTGCCGGGCGGCCCTATCTGCCGTTGGCCAGCGACCGCCAGCAGCGGCACGTGATTTACATTGGCTCCCTGTCCAAGCCTTTGGgccgga                  >  8:296843/1‑145 (MQ=255)                                                                                                                             cTGGCGCGCCAGCATGCCTTTTGCGTGGTCGAAGAGGATTACGACTACGAATACCACTTTGCCGGGCGGCCCTATCTGCCTTTGGCCAGCGACCGCCAGCAGCGGCACGTGATTTACATTGGCTCACTGTCCAAGCCTTTGGGCAGCAc                 >  5:288739/1‑149 (MQ=255)                                                                                                                                gcgcgcCAGCATGCCTTTTGCGTGGTCGAAGAGGATTACGACTACGAATACCACTTTGCCGGGCGGCCCTATCTGCCTTTGGCCAGCGACCGCCAGCAGCGGCACGTGATTTACATTGGCTCACTGTCCAAGCCTTTGGGCAGCACGtt              <  5:2534/149‑1 (MQ=255)                                                                                                                                     ccAGCTTGCCTTTAGCGTGGTCGAAGATCATTCCTACTACCAAGACCACTTTGCCGCGCGGCAATATCTGCCTTTGGCCAGCGACCGACAGGAGCTGCACGTGATTTAAATTGGCTCACTTGCCAAGCCTTTGGGCAGCACGTTTCGtt         <  6:320247/149‑1 (MQ=255)                                                                                                                                     ccAGCATGCCTTTTGCGTGGTCGAAGAGGATTACGACTACGAATACCACTTTGCCGGGCGGCCCTATCTGCCTTTGGCCAGCGACCGCCAGCAGCGGCACGTGATTTACATTGGCTCACTGTCCAAGCCTTTGGGCAGCACGTTTCGtt         >  5:25595/1‑149 (MQ=255)                                                                                                                                        gCATGCCTTTTGCGTGGTCGAAGAGGATTACGACTACGAATACCACTTTGCCGGGCGGCCCTATCTGCCTTTGGCCAGCGACCGCCAGCAGCGGCACGTGATTTACATTGGCTCACTGTCCAAGCCTTTGGGCAGCACGTTTCGTTGCa      <  8:90196/149‑1 (MQ=255)                                                                                                                                         cATGCCTTTTGCGTGGTCGAAGAGGATTACGACTACGAATACCACTTTGCCGGGCGGCCCTATCTGCCTTTGGCCAGCGACCGCCAGCAGCGGCACGTGATTTACATTGGCTCACTGTCCAAGCCTTTGGGCAGCACGTTTCGTTGCAg     <  7:296843/149‑1 (MQ=255)                                                                                                                                         cATGCCTTTTGCGTGGTCGAAGAGGATTACGACTACGAATACCACTTTGCCGGGCGGCCCTATCTGCCTTTGGCCAGCGACCGCCAGCAGCGGCACGTGATTTACATTGGCTCACTGTCCAAGCCTTTGGGCAGCACGTTTCGTTGCAg     <  1:142335/149‑1 (MQ=255)                                                                                                                                            gCCTTTTGCGTGGTCGAAGAGGATTACGACTACGAATACCACTTTGCCGGGCGGCCCTATCTGCCTTTGGTCAGCGACCGCCAGCAGCGGCACGTGATTTACATTGGCTCACTGTCCAAGCCTTTGGGCAGCACGTTTCGTTGCAGCta  >  5:222701/1‑149 (MQ=255)                                                                                                                                            gCCTTTTGCGTGGTCGAAGAGGATTACGACTACGAATACCACTTTGCCGGGCGGCCCTATCTGCCTTTGGCCAGCGACCGCCAGCAGCGGCACGTGATTTACATTGGCTCACTGTCCAAGCCTTTgg                        >  8:222471/1‑127 (MQ=255)                                                                                                                                            gCCTTTTGCGTGGTCGAAGAGGATTACGACTACGAATACCACTTTGCCGGGCGGCCCTATCTGCCTTTGGCCAGCGACCGCCAGCAGCGGCACGTGATTTACATTGGCTCACTGTCCAAGCCTTTgg                        <  7:222471/127‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                              CCGGGTCGACCAGCTCGATGCCCTGTGCCGGCAGCACAAGGTGCGGATGATGTACATAACGCCCCATCACCAGTTCCCGACCACGGTCAGCCTGCCAGCCGGGCGCAGGCAACAGCTGCTGGAGCTGGCGCGCCAGCATGCCTTTTGCGTGGTCGAAGAGGATTACGACTACGAATACCACTTTGCCGGGCGGCCCTATCTGCCTTTGGCCAGCGACCGCCAGCAGCGGCACGTGATTTACATTGGCTCACTGTCCAAGCCTTTGGGCAGCACGTTTCGTTGCAGCTA  >  NC_002947/3027385‑3027672

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.