| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3315571 | 49 (0.950) | 4 (0.080) | 4/248 | NT | 7.8% | coding (588/702 nt) | PP_2915 | membrane protein |
| ? | NC_002947 | = 3315596 | 48 (0.970) | coding (563/702 nt) | PP_2915 | membrane protein | |||||
CGAGAAACTGGCACTGCAGCACCCGCGCATCGAATGATCAGCGCGGCATGTAGCCACGCTGCCAGGACCGCGGAATGAACCGCGATATCAGCGCCAGCACGCAGGCCAGCGCACAGCTGCCGGCCAGCGCCTGCAGGCCCAGGTGTTGTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3315420‑3315571‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgttgcTGGGCGCCGCGCTCGGCGCCTGGTTGCAACAACACCTGGGCCTGCAGGCGCTGGCCGGCAGCTGTGCGCTGGCCTGCGTGCTGGCGCTGATATCGCGGTTCATTCCGCGGTCCTGGCAGCGTGGCTACATGCCGCGCTGATCA < NC_002947/3315596‑3315454 CGAGAAACTGGCACTGCAGCACCCGCGCATCGAATGATCAGCGCGGCATGTAGCCACGCTGCCAGGACCGCGGAATGAACCGCGATATCAGCGCCAGCACGCAGGCCAGCGCACAGCTGCCGGCCAGCGCCTGCAGGCCCCGGTGTTGT > 8:96032/1‑149 agaAAACTGGCACTGCAGCACCCGCGCATCGAATGATCAGCGCGGCATGTAGCCACGCTGCCAGGACCGCGGAATGAACCGCGATATCAGCGCCAGCACGCAGGCCAGCGCACAGCTGCCGGCCAGTGCCTGCAGGCCCAGGTGTTGTT < 3:142141/146‑1 GAGAAACTGGCACTGCAGCACCCGCGCATCGAATGATCAGCGCGGCATGTAGCCACGCTGCCAGGACCGCGGAATGAACCGCGATATCAGCGCCAGCACGCAGGCCAGCGCACAGCTGCCGGCCAGCGCCTGCAGGCCCAGGTGTTGTT < 7:257077/149‑1 GAGAAACTGGCACTGCAGCACCCGCGCATCGAATGATCAGCGCGGCATGTAGCCACGCTGCCAGGACCGCGGAATGAACCGCGATATCAGCGCCAGCACGCAGGCCAGCGCACAGCTGCCGGCCAGCGCCTGCAGGCCCAGGTGTTGTT > 8:257077/1‑149 GAAACTGGCACTGCAGCACCCGCGCATCGAATGATCAGCGCGGCATGTAGCCACGCTGCCAGGACCGCGGAATGAACCGCGATATCAGCGCCAGCACGCAGGCCAGCGCACAGCTGCCGGCCAGCGCCTGCAGGCCCAGGTGTTGTTG > 4:100074/1‑148 TCAGCGCGGCATGTAGCCACGCTGCCAGGACCGCGGAATGAACCGCGATATCAGCGCCAGCACGCAGGCCAGCGCACAGCTGCCGGCCAGCGCCTGCAGGCCCAGGTGTTGTTGCTGGGCGCCGCGCTCGGCGCCTGGTTGCAACAACA < 7:36718/149‑1 CGCGGCATGTAGCCACGCTGCCAGGACCGCGGAATGAACCGCGATATCAGCGCCAGCACGCAGGCCAGCGCACAGCTGCCGGCCAGCGCCTGCAGGCCCAGGTGTTGTTGCTGGGCGCCGCGCTCGGCGCCTGGTTGCAACAACACCTG < 7:155050/149‑1 AACCGCGATATCAGCGCCAGCACGCAGGCCAGCGCACAGCTGCCGGCCAGCGCCTGCAGGCCCAGGTGTTGTTGCTGGGCGCCGCGCTCGGCGCCTGGTTGCAAGAACACCT > 5:9566/1‑112 AACCGCGATATCAGCGCCAGCACGCAGGCCAGCGCACAGCTGCCGGCCAGCGCCTGCAGGCCCAGGTGTTGTTGCTGGGCGCCGCGCTCGGCGCCTGGTTGCAACAACACCT < 6:9566/112‑1 TGTTGCTGGGCGCCGCGCTCGGCGCCTGGTTGCAACAACCCCTGGGCCTGCAGGCGCTGGCCGGCAGCTGTGCGCTGGCCTGCGTGCTGGCGCTGATATCGCGGTTCATTCCGCGGTCCTGGCAGCGTGGCTACCTGCCGCGCTGATCA > 5:139025/1‑149 GTTGCTGGGCGCCGCGCTCGGCGCCTGGTTGCAACAACACCTGGGCCTGCAGGCGCTGGCCGGCAGCTGTGCGCTGGCCTGCGTGCTGGCGCTGATATCGCGGTTCATTCCGCGGTC > 5:126837/1‑117 GTTGCTGGGCGCCGCGCTCGGCGCCTGGTTGCAACAACACCTGGGCCTGCAGGCGCTGGCCGGCAGCTGTGCGCTGGCCTGCGTGCTGGCGCTGATATCGCGGTTCATTCCGCGGTC < 6:126837/117‑1 CGAGAAACTGGCACTGCAGCACCCGCGCATCGAATGATCAGCGCGGCATGTAGCCACGCTGCCAGGACCGCGGAATGAACCGCGATATCAGCGCCAGCACGCAGGCCAGCGCACAGCTGCCGGCCAGCGCCTGCAGGCCCAGGTGTTGTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3315420‑3315571‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgttgcTGGGCGCCGCGCTCGGCGCCTGGTTGCAACAACACCTGGGCCTGCAGGCGCTGGCCGGCAGCTGTGCGCTGGCCTGCGTGCTGGCGCTGATATCGCGGTTCATTCCGCGGTCCTGGCAGCGTGGCTACATGCCGCGCTGATCA < NC_002947/3315596‑3315454 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |