New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3513489 | 32 (0.620) | 3 (0.060) | 3/250 | NT | 8.5% | coding (2157/4158 nt) | PP_3108 | rhs family protein |
? | NC_002947 | = 3513524 | 34 (0.680) | coding (2192/4158 nt) | PP_3108 | rhs family protein |
CACCACGCTGGCGCGCAAGCCCGACGGCGAAGTGCTGCGCATCAGCCACCCGGACGGCACCACGGAAAGCTTCACCTACAACGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3513339‑3513489 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgcTGGCCCTTGGCATCCTGGCGGCTGCTCGGCAGGCCGCGGGCCGTGC < NC_002947/3513524‑3513479 CACCACGCTGGCGCGCAAGCCCGACGGCGAAGTGCTGCGCATCAGCCCCCCGGACGGCACCACGGAAAGCTTCACCTACAACGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCC > 7:95100/1‑149 CTGCGCATCAGCCACCCGGACGGCACCACGGAAAGCTTCACCTACAACGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCTGGCCCTTGGCATCCTGGCGGCTGCTCGGCAG < 6:28907/149‑1 CACGGAAAGCTTCACCTACAACGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCTGGCCCTTGGCATCCTGGCGGCTGCTCGGCAGGCCGCGGGCCGTGC < 1:248472/137‑1 CACGGAAAGCTTCACCTACAACGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCTGGCCCTTGGCATCCTGGCGGCTGCTCGGCAGGCCGCGGGCCGTGC > 2:248472/1‑137 CACCACGCTGGCGCGCAAGCCCGACGGCGAAGTGCTGCGCATCAGCCACCCGGACGGCACCACGGAAAGCTTCACCTACAACGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3513339‑3513489 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgcTGGCCCTTGGCATCCTGGCGGCTGCTCGGCAGGCCGCGGGCCGTGC < NC_002947/3513524‑3513479 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |