| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3912312 = | 48 (0.930) | 5 (0.100) | 5/252 | NT | 9.3% | coding (658/1092 nt) | PP_3452 | GGDEF domain‑containing protein |
| ? | NC_002947 | 3912352 = | 51 (1.020) | coding (698/1092 nt) | PP_3452 | GGDEF domain‑containing protein | |||||
ATGCTTGTCTTGATATGCAGGGCCACGCGCTTGAGCACTTCGTCGCCCACGTCATGGCCGAAACGGTCATTGACCCGCTTGAAATTGTCGATATCGATCATGGCCAGGTACTGCCCGGACGTCGCCATCCGCAGCTGGCGGTCGGCCTGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3912463‑3912312‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcAGTACCTGGCCATGATCGATATCGACAATTTCAAGCGGGTCAATGACCGTTTCGGCCATGACGTGGGCGACGAAGTGCTCAAGCGCGTGGCCCTGCATATCAAGACAAGCATGGCCGATCAGGCGTTTGCCCGGCTGGGAGGTGAA > NC_002947/3912352‑3912497 ATGCTTGTCTTGATATGCAGGGCCACGCGCTTGAGCACTTCGTCGCCCACGTCATGGCCGAAACGGTCATTGACCCGCTTGAAATTGTCGATATCGATCATGGCCAGGTACTGCCCGGACGTCGCCATCCGCAGCTGGCGGTCGGCCTG < 6:58544/149‑1 GCTTGTCTTGATATGCAGGGCCACGCGCTTGAGCACTTCGTCGCCCACGTCATGGCCGAAACGGTCATTGACCCGCTTGAAATTGTCGATATCGATCATGGCCAGGTACTGCCCGGACGTCGCCATCCGCAGCTGGCGGTCGGCCTGGG > 7:159589/1‑149 CTTGTCTTGATATGCAGGGCCACGCGCTTGAGCACTTCGTCGCCCACGTCATGGCCGAAACGGTCATTGACCCGCTTGAAATTGTCGATATCGATCATGGCCAGGTACTGCCCGGACGTCGCCATCCGCAGCTGGCGGTCGGCCTGGGC > 8:251936/1‑149 CTTGTCTTGATATGCAGGGCCACGCGCTTGAGCACTTCGTCGCCCACGTCATGGCCGAAACGGTCATTGACCCGCTTGAAATTGTCGATATCGATCATGGCCAGGTACTGCCCGGACGTCGCCATCCGCAGCTGGCGGTCGGCCTGGGC > 8:294902/1‑149 GTACTGCCCGGACGTCGCCATCCGCAGCTGGCGGTCGGCCTGGGCAGTACCTGGCCATGATCGATATCGACAATTTCAAGCGGGTCAATGACCGTTTCGGCCATGACGTGGGCGACGAAGTGCTCAAGCGCGTGGCCCTGCATATC > 1:57105/1‑146 TACTGCCCGGACGTCGCCATCCGCAGCTGGCGGTCGGCCTGGGCAGTACCTGGCCATGATCGATATCGACAATTTCAAGCGGGTCAATGACCGTTTCGGCCATGACGTGGGCGACGAAGTGCTCAAGCGCGTGGCCCTGCATATCAAGA < 2:57105/149‑1 TACTGCCCGGACGTCGCCATCCGCAGCTGGCGGTCGGCCTGGGCAGTACCTGGCCATGATCGATATCGACAATTTCAAGCGGGTCAATGACCGTTTCGGCCATGACGTGGGCGACGAAGTGCTCAAGCGCGTGGCCCTGCATATCAAG > 8:121949/1‑148 TGCCCGGACGTCGCCATCCGCAGCTGGCGGTCGGCCTGGGCAGTACCTGGCCATGATCGATATCGACAATTTCAAGCGGGTCAATGACCGTTTCGGCCATGACGTGGGCGACGAAGTGCTCAAGCGCGTGGCCCT < 5:191654/135‑1 TGCCCGGACGTCGCCATCCGCAGCTGGCGGTCGGCCTGGGCAGTACCTGGCCATGATCGATATCGACAATTTCAAGCGGGTCAATGACCGTTTCGGCCATGACGTGGGCGACGAAGTGCTCAAGCGCGTGGCCCT > 6:191654/1‑135 GGCAGTACCTGGCCATGATCGATATCGACACTTTCAAGCGGGTCAAAGACCGTTTCGGCCATGACGTGGTCGACGAACTGCTCAAGCGCGTGGCCCTGCATATCAAGACAAGCATGGCCGATCAGGCGTTTGCCCGGCTGGGAGGTGAA < 6:174572/149‑1 ATGCTTGTCTTGATATGCAGGGCCACGCGCTTGAGCACTTCGTCGCCCACGTCATGGCCGAAACGGTCATTGACCCGCTTGAAATTGTCGATATCGATCATGGCCAGGTACTGCCCGGACGTCGCCATCCGCAGCTGGCGGTCGGCCTGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3912463‑3912312‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcAGTACCTGGCCATGATCGATATCGACAATTTCAAGCGGGTCAATGACCGTTTCGGCCATGACGTGGGCGACGAAGTGCTCAAGCGCGTGGCCCTGCATATCAAGACAAGCATGGCCGATCAGGCGTTTGCCCGGCTGGGAGGTGAA > NC_002947/3912352‑3912497 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |