New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4088741	25 (0.480)	4 (0.080)	4/250	NT	14.0%	intergenic (+155/‑193)	PP_3598/kdgD	peptidase C26/5‑dehydro‑4‑deoxyglucarate dehydratase
	?	NC_002947	= 4088761	25 (0.500)					intergenic (+175/‑173)	PP_3598/kdgD	peptidase C26/5‑dehydro‑4‑deoxyglucarate dehydratase

CGCAAGGCCGCCCCCGCTTCCCCGGTCACCCTCTGCTGGTCCCAGAACTCTTCCCGTGGAATCGGGCGGCGGGCTTGTGCCTGTCTCCGCGATCGTTTTTTCCTTTCCCTTAAGAGATACGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4088620‑4088741 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tacgaCGACAAACACATAGCAGTCATCGTATCTCTTAAGGGAAAGGAAAAAACGATCGCGGAGACAGGCACAAGCCCGCCGCCCGATTCCACGGGAAGAGTTCTGGGACCAGCAGAGGGTGACCGGGGAAGCGGGGGCGGCCTTGCGCCGCCC  <  NC_002947/4088761‑4088614                                                                                                                                                                                                                                                                                CGCAAGGCCGCCCCCGCTTCCCCGGTCACCCTCTGCTGGTCCCAGAACTCTTCCCGTGGAATCGGGCGGCGGGCTTGTGCCTGTCTCCGCGATCGTTTTTTCCTTTCCCTTAAGAGATACGACGACAAACACATAGCAGTCATCGTATC                                                                                                                           >  8:34384/1‑149        CCGCCCCCGCTTCCCCGGTCACCCTCTGCTGGTCCCAGAACTCTTCCCGTGGAATCGGGCGGCGGGCTTGTGCCTGTCTCCGCGATCGTTTTTTCCTTTCCCTTAAGAGATACGACGACAAACACATAGCAGTCATCGTATCTCTTAAG                                                                                                                    <  7:34384/149‑1                              CCTCTGCTGGTCCCAGAACTCTTCCCGTGGAATCGGGCGGCGGGCTTGTGCCTGTCTCCGCGATCGTTTTTTCCTTTCCCTTAAGAGATACGACGACAAACACATAGCAGTCATCGTATCTCT                                                                                                                        >  3:211618/1‑123                              CCTCTGCTGGTCCCAGAACTCTTCCCGTGGAATCGGGCGGCGGGCTTGTGCCTGTCTCCGCGATCGTTTTTTCCTTTCCCTTAAGAGATACGACGACAAACACATAGCAGTCATCGTATCTCT                                                                                                                        <  4:211618/123‑1                                                                                                                          ACGACAAACACATAGCAGTCATCGTATCTCTTAAGGGAAAGGAAAAAACGATCGCGGAGACAGGCACAAGCCCGCCGCCCGATTCCACGGGAAGAGTTCTGGGACCAGCAGAGGGTGACCGGGGAAGCGGGGGCGGCCTTGCGCCGCCC  >  7:240100/1‑149                                                                                                                          ACGACAAACACATAGCAGTCATCGTATCTCTTAAGGGAAAGGAAAAAACGATCGCGGAGACAGGCACAAGCCCGCCGCCCGATTCCAC                                                               >  3:129436/1‑88                                                                                                                          ACGACAAACACATAGCAGTCATCGTATCTCTTAAGGGAAAGGAAAAAACGATCGCGGAGACAGGCACAAGCCCGCCGCCCGATTCCAC                                                               <  4:129436/88‑1                                                                                                                                                                                                                                                                                CGCAAGGCCGCCCCCGCTTCCCCGGTCACCCTCTGCTGGTCCCAGAACTCTTCCCGTGGAATCGGGCGGCGGGCTTGTGCCTGTCTCCGCGATCGTTTTTTCCTTTCCCTTAAGAGATACGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4088620‑4088741 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tacgaCGACAAACACATAGCAGTCATCGTATCTCTTAAGGGAAAGGAAAAAACGATCGCGGAGACAGGCACAAGCCCGCCGCCCGATTCCACGGGAAGAGTTCTGGGACCAGCAGAGGGTGACCGGGGAAGCGGGGGCGGCCTTGCGCCGCCC  <  NC_002947/4088761‑4088614

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.