| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4699089 | 61 (1.180) | 4 (0.080) | 4/246 | NT | 6.4% | coding (1599/2655 nt) | kdpD | sensor protein |
| ? | NC_002947 | = 4699105 | 59 (1.210) | coding (1583/2655 nt) | kdpD | sensor protein | |||||
CTGCCCATGCTGCCAGGCCCAATCGGCAGCCGCCCGTTCGGTGTCGCTGAAGGTGCAGGCTTCCCCGCTGGCCACTTGCAACTGGCCTTCGGCGTTGCGCTCCAGCAAGCACACCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4698972‑4699089‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacctggACGGGTGGCAGGACGCCCAGGTGTGCTTGCTGGAGCGCAACGCCGAAGGCCAGTTGCAAGTGGCCAGCGGGGAAGCCTGCACCTTCAGCGACACCGAACGGGCGGCTGCCGATTGGGCCTGGCAGCATGGGCAGGCCGCCGGTCACG < NC_002947/4699105‑4698959 CTGCCCATGCTGCCAGGCCCAATCGGCAGCCGCCCGTTCGGTGTCGCTGAAGGTGCAGGCTTCCCCGCTGGCCACTTGCAACTGGCCTTCGGCGTTGCGCTCCAGCAAGCACACCTGGACGGGTGGCAGGACGCCCAGGTGTGCTTGCT > 4:271484/1‑149 CCATGCTGCCAGGCCCAATCGGCAGCCGCCCGTTCGGTGTCGCTGAAGGTGCAGGCTTCCCCGCTGGCCACTTGCAACTGGCCTTCGGCGTTGCGCTCCAGCAAGCACACCTGGACGGGTGGCAGGACGCCCAGGTGTGCTTGCTGGAG < 3:271484/149‑1 CGCCCGTTCGGTGTCGCTGAAGGTGCAGGCTTCCCCGCTGGCCACTTGCAACTGGCCTTCGGCGTTGCGCTCCAGCAAGCACACCTGGACGGGTGGCAGGACGCCCAGGTGTGCTTGCTG > 5:283665/1‑120 CGCCCGTTCGGTGTCGCTGAAGGTGCAGGCTTCCCCGCTGGCCACTTGCAACTGGCCTTCGGCGTTGCGCTCCAGCAAGCACACCTGGACGGGTGGCAGGACGCCCAGGTGTGCTTGCTG < 6:283665/120‑1 CCTGGACGGGTGGCAGGACGCCCAGGTGTGCTTGCTGGAGCGCAACGCCGAAGGCCAGTTGCAAGTGGCCAGCGGGGAAGCCTGCACCTTCAGCGACACCGAACGGG > 5:13686/1‑107 CCTGGACGGGTGGCAGGACGCCCAGGTGTGCTTGCTGGAGCGCAACGCCGAAGGCCAGTTGCAAGTGGCCAGCGGGGAAGCCTGCACCTTCAGCGACACCGAACGGG < 6:13686/107‑1 GACGGGTGGCAGGACGCCCAGGTGTGCTTGCTGGAGCGCAACGCCGAAGGCCAGTTGCAAGTGGCCAGCGGGGAAGCCTGCACCTTCAGCGACACCGAACGGGCGGCTGCCGATTGGGCCTGGCAGCATGGGCAGGCCGCCGGTCACG < 1:217404/148‑1 CTGCCCATGCTGCCAGGCCCAATCGGCAGCCGCCCGTTCGGTGTCGCTGAAGGTGCAGGCTTCCCCGCTGGCCACTTGCAACTGGCCTTCGGCGTTGCGCTCCAGCAAGCACACCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4698972‑4699089‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacctggACGGGTGGCAGGACGCCCAGGTGTGCTTGCTGGAGCGCAACGCCGAAGGCCAGTTGCAAGTGGCCAGCGGGGAAGCCTGCACCTTCAGCGACACCGAACGGGCGGCTGCCGATTGGGCCTGGCAGCATGGGCAGGCCGCCGGTCACG < NC_002947/4699105‑4698959 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |