New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4712124 = | 51 (0.990) | 4 (0.080) | 4/248 | NT | 8.1% | coding (356/2115 nt) | PP_4171 | hypothetical protein |
? | NC_002947 | 4712160 = | 42 (0.850) | coding (392/2115 nt) | PP_4171 | hypothetical protein |
CCATGGCTGTCGGCGGGTTTGCGGGTGAGGATGTTGACCACCGCCATCAGCGCGTTGGCGCCATAGCTGACGGTATTCGGGCCACGAAACACCTCGATGCGCTCGATATCCTCCATGGCCAAGGGGATGTCGCTCCAGTCCACCGTGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4712274‑4712124 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccaTGGAGGATATCGAGCGCATCGAGGTGTTTCGTGGCCCGAATACCGTCAGCTATGGCGCCAACGCGCTGATGGCGGTGGTCAACATCCTCACCCGCAAACCCGCCGACAGCCATGGTACGCGGCTGAAAGTGACACGCGGCCAG > NC_002947/4712160‑4712302 CCATGGCTGTCGGCGGGTTTGCGGGTGAGGATGTTGACCACCGCCATCAGCGCGTTGGCGCCATAGCTGACGGTATTCGGGCCACGAAACACCTCGATGCGCTCGATATCCTCCATGGCCAAGGGGATGTCGCTCCAGTCCACCGTGGC < 1:203901/149‑1 CATGGCTGTCGGCGGGTTTGCGGGTGAGGATGTTGACCACCGCCATCAGCGCGTTGGCGCCATAGCTGACGGTATTCGGGCCACGAAACACCTCGATGCGCTCGATATCCTCCATGGCCAAGGGGATGTCGCTCCAGTCCACCGTGGC > 4:125154/1‑148 CATGGCTGTCGGCGGGTTTGCGGGTGAGGATGTTGACCACCGCCATCAGAGCGTTGGCGCCATAGCTGACGGTATTCGGGCCACGATACACCTCGATCCGCTCGATATCATCCATGGCCAAGGGGATGTCGCTGCAGTCACCCGTGGC > 8:94496/1‑148 CTCGATATCCTCCATGGCCAAGGGGATGTCGCTCCAGTCCACCGTGGCCATGGAGGATATCGAGCGCATCGAGGTGTTTCGTGGCCCGAATACCGTCAGCTATGGCGCCAACGCGCTGATGGCGGTGGTCAACATCCTCACCCGCAAAC > 8:182822/1‑149 CCTCCATGGCCAAGGGGATGTCGCTCCAGTCCACCGTGGCCATGGAGGATATCGAGCGCATCGAGGTGTTTCGTGGCCCGAATACCGTCAGCTATGGCGCCAACGCGCTGATGGCGGTGGTCAACATCCTCACCCGCAAACCCGCCGA > 2:306908/1‑148 TCCATGGCCAAGGGGATGTCGCTCCAGTCCACCGTGGCCATGGAGGATATCGAGCGCATCGAGGTGTTTCGTGGCCGGAATACCGTCAGCTATGGCGCCAACGCGCTCATGGCGGTGGTCAAGAGCCTCACCCGCAAACCCGCCGCCAG > 3:242823/1‑149 CTCCAGTCCACCGTGGCCATGGAGGATATCGAGCGCATCGAGGTGTTTCGTGGCCCGAATACCGTCAGCTATGGCGCCAACGCGCTGATGGCGGTGGTCAACATCCTCACCCGCAAACCCGCCGACAGCCATGGTACGCGGCTGAAAGT < 7:182822/149‑1 GGCCATGGAGGATATCGAGCGCATCGAGGTGTTTCGTGGCCCGAATACCGTCAGCTATGGCGCCAACGCGCTGATGGCGGTGGTCAACATCCTCACCCGCAAACCCGCCGACAGCCATGGTACGCGGCTGAAAGTGACACGCGGCCAG < 5:43318/148‑1 CATGGAGGATATCGAGCGCATCGAGGTGTTTCGTGGCCCGAATACCGTCAGCTATGGCGCCAACGCGCTGATGGCGGTGGTCAACATCCTCACCCGCAAACCCGCCGACAGCCATGGTACGCGGCTGAAAGT > 6:29712/1‑132 CCATGGCTGTCGGCGGGTTTGCGGGTGAGGATGTTGACCACCGCCATCAGCGCGTTGGCGCCATAGCTGACGGTATTCGGGCCACGAAACACCTCGATGCGCTCGATATCCTCCATGGCCAAGGGGATGTCGCTCCAGTCCACCGTGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4712274‑4712124 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccaTGGAGGATATCGAGCGCATCGAGGTGTTTCGTGGCCCGAATACCGTCAGCTATGGCGCCAACGCGCTGATGGCGGTGGTCAACATCCTCACCCGCAAACCCGCCGACAGCCATGGTACGCGGCTGAAAGTGACACGCGGCCAG > NC_002947/4712160‑4712302 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |