| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4759856 = | 60 (1.160) | 4 (0.080) | 4/238 | NT | 7.4% | intergenic (‑73/‑83) | pvdP/pvdM | pyoverdine biosynthesis‑like protein/dipeptidase |
| ? | NC_002947 | 4759907 = | 45 (0.950) | intergenic (‑124/‑32) | pvdP/pvdM | pyoverdine biosynthesis‑like protein/dipeptidase | |||||
GGCTTTTTTCCAGCGTGCTGTCGTCATTTCGGTCTCAGTAGGTTCACCGCAGAGGTTCGGGCCTGGGGCCATTGCTACCTGGAGGGAACGAGTGCACGCGGCAGAAATTTAACCGGCCCTCCAGTCACGGGCGCGCCGTCAGGACGGTTAAATTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4760010‑4759856‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggttaaatttCTGCCGCGTGCACTCGTTCCCTCCAGGTAGCAATGGCCCCAGGCCCGAACCTCTGCGGTGAACCTACTGAGACCGAAATGACGACAGCACGCTGGAAAAAAGCCTTGTATATCAGCCTGGCCGCCACCTTGACCGTCGGTGCCGGG > NC_002947/4759907‑4760052 GGCTTTTTTCCAGCGTGCTGTCGTCATTTCGGTCTCAGTAGGTTCACCGCAGAGGTTCGGGCCTGGGGCCATTGCTACCTGGAGGGAACGAGTGCACGCGGCAGAAATTTAACCGGCCCTCCAGTCACGGGCGCGCCGTCAGGACGGTT < 5:220675/149‑1GGCTTTTTTCCAGCGTGCTGTCGTCATTTCGGTCTCAGTAGGTTCACCGCAGAGGTTCGGGCCTGGGGCCATTGCTACCTGGAGGGAACGAGTGCACGCGGCAGAAATTTAACCGGCCCTCCAGTCACGGGCGCGCCGTCAGGACGGT > 7:194125/1‑148 AGAAATTTAACCGGCCCTCCAGTCACGGGCGCGCCGTCAGGACGGTTAAATTTCTGCCGCGTGCACTCGTTCCCTCCAGGTAGCAATGGCCCCAGGCCCGAACCTCTGCGGTGAACCTACTGAGACCGAAATGACGA < 3:205836/137‑1 AGAAATTTAACCGGCCCTCCAGTCACGGGCGCGCCGTCAGGACGGTTAAATTTCTGCCGCGTGCACTCGTTCCCTCCAGGTAGCAATGGCCCCAGGCCCGAACCTCTGCGGTGAACCTACTGAGACCGAAATGACGA > 4:205836/1‑137 CCCTCCAGTCACGGGCGCGCCGTCAGGACGGTTAAATTTCTGCCGCGTGCACTCGTTCCCTCCAGGTAGCAATGGCCCCAGGCCCGAACCTCTGCGGTGAACCTACTGAGACCGAAATGACGACAGCACGCTG > 3:30130/1‑133 CCCTCCAGTCACGGGCGCGCCGTCAGGACGGTTAAATTTCTGCCGCGTGCACTCGTTCCCTCCAGGTAGCAATGGCCCCAGGCCCGAACCTCTGCGGTGAACCTACTGAGACCGAAATGACGACAGCACGCTG < 4:30130/133‑1 CGGTTAAATTTCTGCCGCGTGCACTCGTTCCCTCCAGGTAGCAATGGCCCCAGGCCCGAACCTCTGCGGTGAACCTACTGAGACCGAAATGACGACAGCACGCTGGAAAAAAGCCTTGTATATCAGCCTGGCCGCCACCTTGACCGTCG > 7:293949/1‑149 ATTTCTGCCGCGTGCACTCGTTCCCTCCAGGTAGCAATGGCCCCAGGCCCGAACCTCTGCGGTGAACCTACTGAGACCGAAATGACGACAGCACGCTGGAAAAAAGCCTTGTATATCAGCCTGGCCGCCACCTTGACCGTCG > 7:64179/1‑142 ATTTCTGCCGCGTGCACTCGTTCCCTCCAGGTAGCAATGGCCCCAGGCCCGAACCTCTGCGGTGAACCTACTGAGACCGAAATGACGACAGCACGCTGGAAAAAAGCCTTGTATATCAGCCTGGCCGCCACCTTGACCGTCG < 8:64179/142‑1 TTTCTGCCGCGTGCACTCGTTCCCTCCAGGTAGCAATGGCCCCAGGCCCGAACCTCTTCGGTGAACCTACTGAGACCGAAATGACCAAAGCACGCTGGAAAAAAGCCTTGTATAACAGCCTGGCCGCCACCTTGACCGTCGGTGCCGGG > 7:231148/1‑149 GGCTTTTTTCCAGCGTGCTGTCGTCATTTCGGTCTCAGTAGGTTCACCGCAGAGGTTCGGGCCTGGGGCCATTGCTACCTGGAGGGAACGAGTGCACGCGGCAGAAATTTAACCGGCCCTCCAGTCACGGGCGCGCCGTCAGGACGGTTAAATTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4760010‑4759856‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggttaaatttCTGCCGCGTGCACTCGTTCCCTCCAGGTAGCAATGGCCCCAGGCCCGAACCTCTGCGGTGAACCTACTGAGACCGAAATGACGACAGCACGCTGGAAAAAAGCCTTGTATATCAGCCTGGCCGCCACCTTGACCGTCGGTGCCGGG > NC_002947/4759907‑4760052 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |