New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 476559352 (1.010)3 (0.060) 3/248 NT 5.9% coding (246/2439 nt) fpvA TonB‑dependent outer membrane ferripyoverdine receptor FpvA
?NC_002947 = 4765635 46 (0.930)coding (288/2439 nt) fpvA TonB‑dependent outer membrane ferripyoverdine receptor FpvA

AACGTGCCGGCCCAGCCGCTGGCCAGCGCCTTGTTGGCCTTCGGCTCGCAATCGAACCTGCAGGTGCTCTATAGCCCACAGGACGTGGAAGGCAAGCGCAGCAGCGCACTGACCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4765477‑4765593
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accggtACCCTGCAGCAGCCGCGACAGGGCCGCGGCGGGCTCCATTGCACCGGTCAGTGCGCTGCTGCGCTTGCCTTCCACGTCCTGTGGGCTATAGAGCACCTGCAGGTTCGATTGCGAGCCGAAGGCCAACAAGGCGCTGGCCAGCGGCTGG  <  NC_002947/4765635‑4765488
                                                                                                                                                                                                                                                                         
AACGTGCCGGCCCAGCCGCTGGCCAGCGCCTTGTTGGCCTTCGGCTCGCAATCGAACCTGCAGGTGCTCTATAGCCCACAGGACGTGGAAGGCAAGCGCAGCAGCGCACTGACCGGTACCCTGCAGCAGCCGCGACAGGGCCGCGGCGG                                                                                                                      >  2:83632/1‑149
                  CTGGCCAGCGCCTTGTTGGCCTTCGGCTCGCAATCGAACCTGCAGGTGCTCTATAGCCCACAGGACGTGGAAGGCAAGCGCAGCAGCGCACTGACCGGTACCCTGCAGCAGCCGCGACAGGGCCGCGGCGGGCTCCATTGCACCGGTCA                                                                                                    <  1:83632/149‑1
                       CAGCGCCTTGTTGGCCTTCGGCTCGCAATCGAACCTGCAGGTGCTCTATAGCCCACAGGACGTGGAAGGCAAGCGCAGCAGCGCACTGACCGGTACCCTGCAGCAGCCGCGACAGGGCCGCGGCGGGCTCCATTGCACCGGTCAGTGC                                                                                                >  3:145648/1‑148
                                                                                                                    TACCCTGCAGCAGCCGCGACAGGGCCGCGGCGGGCTCCATTGCACCGGTCAGTGCGCTGCTGCGCTTGCCTTCCACGTCCTGTGGGCTATAGAGCACCTGCAGGTTCGATTGCGAGCCGAAGGCCAACAAGGCGCTGGCCAGCGGCTGG  <  4:5049/149‑1
                                                                                                                                                                                                                                                                         
AACGTGCCGGCCCAGCCGCTGGCCAGCGCCTTGTTGGCCTTCGGCTCGCAATCGAACCTGCAGGTGCTCTATAGCCCACAGGACGTGGAAGGCAAGCGCAGCAGCGCACTGACCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4765477‑4765593
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accggtACCCTGCAGCAGCCGCGACAGGGCCGCGGCGGGCTCCATTGCACCGGTCAGTGCGCTGCTGCGCTTGCCTTCCACGTCCTGTGGGCTATAGAGCACCTGCAGGTTCGATTGCGAGCCGAAGGCCAACAAGGCGCTGGCCAGCGGCTGG  <  NC_002947/4765635‑4765488

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.