| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4765593 | 52 (1.010) | 3 (0.060) | 3/248 | NT | 5.9% | coding (246/2439 nt) | fpvA | TonB‑dependent outer membrane ferripyoverdine receptor FpvA |
| ? | NC_002947 | = 4765635 | 46 (0.930) | coding (288/2439 nt) | fpvA | TonB‑dependent outer membrane ferripyoverdine receptor FpvA | |||||
AACGTGCCGGCCCAGCCGCTGGCCAGCGCCTTGTTGGCCTTCGGCTCGCAATCGAACCTGCAGGTGCTCTATAGCCCACAGGACGTGGAAGGCAAGCGCAGCAGCGCACTGACCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4765477‑4765593‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accggtACCCTGCAGCAGCCGCGACAGGGCCGCGGCGGGCTCCATTGCACCGGTCAGTGCGCTGCTGCGCTTGCCTTCCACGTCCTGTGGGCTATAGAGCACCTGCAGGTTCGATTGCGAGCCGAAGGCCAACAAGGCGCTGGCCAGCGGCTGG < NC_002947/4765635‑4765488 AACGTGCCGGCCCAGCCGCTGGCCAGCGCCTTGTTGGCCTTCGGCTCGCAATCGAACCTGCAGGTGCTCTATAGCCCACAGGACGTGGAAGGCAAGCGCAGCAGCGCACTGACCGGTACCCTGCAGCAGCCGCGACAGGGCCGCGGCGG > 2:83632/1‑149 CTGGCCAGCGCCTTGTTGGCCTTCGGCTCGCAATCGAACCTGCAGGTGCTCTATAGCCCACAGGACGTGGAAGGCAAGCGCAGCAGCGCACTGACCGGTACCCTGCAGCAGCCGCGACAGGGCCGCGGCGGGCTCCATTGCACCGGTCA < 1:83632/149‑1 CAGCGCCTTGTTGGCCTTCGGCTCGCAATCGAACCTGCAGGTGCTCTATAGCCCACAGGACGTGGAAGGCAAGCGCAGCAGCGCACTGACCGGTACCCTGCAGCAGCCGCGACAGGGCCGCGGCGGGCTCCATTGCACCGGTCAGTGC > 3:145648/1‑148 TACCCTGCAGCAGCCGCGACAGGGCCGCGGCGGGCTCCATTGCACCGGTCAGTGCGCTGCTGCGCTTGCCTTCCACGTCCTGTGGGCTATAGAGCACCTGCAGGTTCGATTGCGAGCCGAAGGCCAACAAGGCGCTGGCCAGCGGCTGG < 4:5049/149‑1 AACGTGCCGGCCCAGCCGCTGGCCAGCGCCTTGTTGGCCTTCGGCTCGCAATCGAACCTGCAGGTGCTCTATAGCCCACAGGACGTGGAAGGCAAGCGCAGCAGCGCACTGACCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4765477‑4765593‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accggtACCCTGCAGCAGCCGCGACAGGGCCGCGGCGGGCTCCATTGCACCGGTCAGTGCGCTGCTGCGCTTGCCTTCCACGTCCTGTGGGCTATAGAGCACCTGCAGGTTCGATTGCGAGCCGAAGGCCAACAAGGCGCTGGCCAGCGGCTGG < NC_002947/4765635‑4765488 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |