New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4828483 | 42 (0.810) | 3 (0.060) | 3/246 | NT | 6.2% | coding (2707/12954 nt) | pvdL | non‑ribosomal peptide synthetase |
? | NC_002947 | = 4828510 | 51 (1.040) | coding (2680/12954 nt) | pvdL | non‑ribosomal peptide synthetase |
ATGCCTTGGGTTTCCAGGCGCGGGCGGTTGGCGTTGGGCACGCCGACGCGGATATCGGCCTGGCCACTGTAGCGCTGCAGCAGCGCCTGCCAACCGGCCAGCAGGACCATGAACAGGCTGGCCTGCTGCTGGTGGGCAAGGCCCTTGAGCGCTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4828329‑4828483 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcttcAGCCTCAAGGTGCCAGTCAGGCTTGGCGAAGCGCTCAAGGGCCTTGCCCACCAGCAGCAGGCCAGCCTGTTCATGGTCCTGCTGGCCGGTTGGCAGGCGCTGCTGCAGCGCTACAGTGGCCAGGCCGATATCCGCGTCGGCGTG < NC_002947/4828510‑4828367 ATGCCTTGGGTTTCCAGGCGCGGGCGGTTGGCGTTGGGCACGCCGACGCGGATATCGGCCTGGCCACTGTAGCGCTGCAGCAGCGCCTGCCAACCGGCCAGCAGGACCATGAACAGGCTGGCCTGCTGCTGGTGGGCAAGGCCCTTGAG < 7:185359/149‑1 CTTGGGTTTCCAGGCGCGGGCGGTTGGCGTTGGGCACGCCGACGCGGATATCGGCCTGGCCACTGTAGCGCTGCAGCAGCGCCTGCCAACCGGCCAGCAGGACCATGAACAGGCTGGCCTGCTGCTGGTGGGCAAGGCCCTTGAGCGCT > 2:20725/1‑149 TTGGGTTTCCAGGCGCGGGCGGTTGGCGTTGGGCACGCCGACGCGGATATCGGCCTGGCCACTGTAGCGCTGCAGCAGCGCCTGCCAACCGGCCAGCAGGACCATGAACAGGCTGGCCTGCTGCTGGTGGGCAAGGCCCTTGAGCGCTT > 6:106784/1‑149 GGGTTTCCAGGCGCGGGCGGTTGGCGTTGGGCACGCCGACGCGGATATCGGCCTGGCCACTGTAGCGCTGCAGCAGCGCCTGCCAACCGGCCAGCAGGACCATGAACAGGCTGGCCTGCTGCTGGTGGGCAAGGCCCTTGAGCGCTTC < 1:15842/148‑1 GGGTTTCCAGGCGCGGGCGGTTGGCGTTGGGCACGCCGACGCGGATATCGGCCTGGCCACTGTAGCGCTGCAGCAGCGCCTGCCAACCGGCCAGCAGGACCATGAACAGGCTGGCCTGCTGCTGGTGGGCAAGGCCCTTGAGCGCTTC < 1:182117/148‑1 GGCACGCCGACGCGGATATCGGCCTTGCCACTGTAGCGCTGCAGCAGCGCCTGCCAACCGGCCAGCAGGACCATGAACAGGCTGGCCTGCTGCTGGTGGGCAAGGCCCTTGAGCGCTTCAGCCTCAAGGTGCCAGTCAGGCTTGGCGAA < 7:200502/149‑1 GCGGATATCGGCCTGGCCACTGTAGCGCTGCAGCAGCGCCTGCCAACCGGCCAGCAGGACCATGAACAGGCTGGCCTGCTGCTGGTGGGCAAGGCCCTTGAGCGCTTCAGCCTCAAGGTGCCAGTCAGGCTTGGCGAAGCGC > 7:126906/1‑142 GCGGATATCGGCCTGGCCACTGTAGCGCTGCAGCAGCGCCTGCCAACCGGCCAGCAGGACCATGAACAGGCTGGCCTGCTGCTGGTGGGCAAGGCCCTTGAGCGCTTCAGCCTCAAGGTGCCAGTCAGGCTTGGCGAAGCGC < 8:126906/142‑1 GCTTCAGCCTCAAGGTGCCAGTCAGGCTTGGCGAAGCGCTCAAGGGCCTTGCCCACCAGCAGCAGGCCAGCCTGTTCATGGTCCTGCTGGCCGGTTGGCAGGCGCTGCTGCAGCGCTACAGTGGCCAGGCCGATATCCGCGTCGGCGTG > 1:240616/1‑149 GCTTCAGCCTCAAGGTGCCAGTCAGGCTTGGCGAAGCGCTCAAGGGCCTTGCCCACCAGCAGCAGGCCAGCCTGTTCATGGTCCTGCTGGCCGGTTGGCAGGCGCTGCTGCAGCGCTACAGTGGCCAGGCCGATATCCGCGTCGGCGTG > 7:195560/1‑149 ATGCCTTGGGTTTCCAGGCGCGGGCGGTTGGCGTTGGGCACGCCGACGCGGATATCGGCCTGGCCACTGTAGCGCTGCAGCAGCGCCTGCCAACCGGCCAGCAGGACCATGAACAGGCTGGCCTGCTGCTGGTGGGCAAGGCCCTTGAGCGCTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4828329‑4828483 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcttcAGCCTCAAGGTGCCAGTCAGGCTTGGCGAAGCGCTCAAGGGCCTTGCCCACCAGCAGCAGGCCAGCCTGTTCATGGTCCTGCTGGCCGGTTGGCAGGCGCTGCTGCAGCGCTACAGTGGCCAGGCCGATATCCGCGTCGGCGTG < NC_002947/4828510‑4828367 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |