| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4876426 = | 52 (1.010) | 3 (0.060) | 3/242 | NT | 5.9% | intergenic (+264/+173) | PP_4284/pucM | transporter/5‑hydroxyisourate hydrolase |
| ? | NC_002947 | 4876502 = | 47 (0.980) | intergenic (+340/+97) | PP_4284/pucM | transporter/5‑hydroxyisourate hydrolase | |||||
TCTTCGTAGGTCCTTTGGCCCGCTCTCACACTGGCGGGCTTTTTTTCGTCTGCTGTTTTTTGCGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACGACGGGCTGTGTCCAACTGTCCACCCCGTGGTAGGAGCGGGTTTACCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4876582‑4876426‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acccgcgaaGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGACCTACGAAGATTCTTCTAGCGACCAACTAGCTTCCACGATAGGTCGAATAGCTGTACGGCGAAATCAGCA > NC_002947/4876502‑4876642 TCTTCGTAGGTCCTTTGGCCCGCTCTCACACTGGCGGGCTTTTTTTCGTCTGCTGTTTTTTGCGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACGACGGGCTGTGTCCAACTGTCCACCCCGTGGTAGGAGCGGGTTTA > 3:106871/1‑149TCTTCGTAGGTCCTTTGGCCCGCTCTCACACTGGCGGGCTTTTTTTCGTCTGCTGTTTTTTGCGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACGACGGGCTGTGTCCAACTGTCAACCCCGTGGTAGGAGCGGGTTTA > 7:126489/1‑149 CGTAGGTCCTTTGGCCCGCTCTCACACTGGCGGGCTTTTTTTCGTCTGCTGTTTTTTGCGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACGACGGGCTGTGTCCAACTGTCCACCCCGTGGTAGGAGCGGGTTTAC < 1:102091/146‑1 GTAGGTCCTTTGGCCCGCTCTCACACTGGCGGGCTTTTTTTCGTCTGCTGTTTTTTGCGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACGACGGGCTGTGTCCAACTGTCCACCCCGTGGTAGGAGCGGGTTTACCCGC > 5:104984/1‑149 AGGTCCTTTGGCCCGCTCTCACACTGGCGGGCTTTTTTTCGTCTGCTGTTTTTTGCGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACGACGGGCTGTGTCCAACTGTCCACCCCGTGGTAGGAGCCGGTTTACCAGCG > 3:161248/1‑148 CCCGCTCCTACGACGGGCTGTGTCCAACTGTCCACCCCGTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGACCTACGAAGATTCT > 1:297940/1‑149 TCCTACGACGGGCTGTGTCCAACTGTCCACCCCGTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAA > 5:12261/1‑127 TCCTACGACGGGCTGTGTCCAACTGTCCACCCCGTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAA < 6:12261/127‑1 CCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGACCTACGAAGATTCTTCTAGCGACCAACTAGCTTCCACGATAGGTCGAATAGCTGTACGGCGAAATCAGCA < 2:297940/149‑1 CCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGACCTACGAAGATTCTTCTAGCGACCAACTAGCTTCCACGATAGGTCGAATAGCTGTACGGCGAAATCAGCA < 6:190060/149‑1 CCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGACCTACGAAGATTCTTCTAGCGACCAACTAGCTTCCA > 3:53778/1‑115 CCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGACCTACGAAGATTCTTCTAGCGACCAACTAGCTTCCA < 4:53778/115‑1 CCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGACCTACGAAGATTCTTCTAGCGACCAACTAGCTTCCACGATAGGTCGAATAGCTGTACGGCGAAATCA < 5:225698/145‑1 CCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGACCTACGAAGATTCTTCTAGCGACCAACTAGCTTCCACGATAGGTCGAATAGCTGTACGGCGAAATCA > 6:225698/1‑145 TCTTCGTAGGTCCTTTGGCCCGCTCTCACACTGGCGGGCTTTTTTTCGTCTGCTGTTTTTTGCGTTGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACGACGGGCTGTGTCCAACTGTCCACCCCGTGGTAGGAGCGGGTTTACCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4876582‑4876426‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acccgcgaaGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAGGACCTACGAAGATTCTTCTAGCGACCAACTAGCTTCCACGATAGGTCGAATAGCTGTACGGCGAAATCAGCA > NC_002947/4876502‑4876642 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |