New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4876426 =	52 (1.010)	3 (0.060)	3/242	NT	5.9%	intergenic (+264/+173)	PP_4284/pucM	transporter/5‑hydroxyisourate hydrolase
	?	NC_002947	4876502 =	47 (0.980)					intergenic (+340/+97)	PP_4284/pucM	transporter/5‑hydroxyisourate hydrolase

CACCGTATTCGCGGGTAAACCCGCTCCTACAACGGTGGTGGACAGTTGGATACAGCCCGCCGTAGGAGCGGGTTCACCCGCGAAGAGG‑‑CCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCG‑CGGGTAAACCCGC‑TCCTACCACGGGG‑T‑‑GGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAG  >  NC_002947/4876284‑4876570                                                                                                                                                 |                                                                                                                                                      ctccGTATTCGCGGTTAAACCCGCTCGTACATCGGTGGTGGACAGTTGGATACAGCCCGCCGTAGGAGCGGGTTCACCCGCGAAGAGG‑‑CCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCG‑Cgg                                                                                                                                                <  4:275515/147‑1 (MQ=255)    tgctgatttcgccgtacagctattcgacctatcgtggaagctagttggtcgctagaagaatcttcgtaggtcctttggcccgctctcacactggcgggctttttttcgtctgctgttttttgcgttgcctgtgccggcctcTTCG‑Cggg                                                                                                                                               <  6:190060‑M1/8‑1 (MQ=255)    tgctgatttcgccgtacagctattcgacctatcgtggaagctagttggtcgctagaagaatcttcgtaggtcctttggcccgctctcacactggcgggctttttttcgtctgctgttttttgcgttgcctgtgccggcctcTTCG‑Cggg                                                                                                                                               <  2:297940‑M1/8‑1 (MQ=255)       tgatttcgccgtacagctattcgacctatcgtggaagctagttggtcgctagaagaatcttcgtaggtcctttggcccgctctcacactggcgggctttttttcgtctgctgttttttgcgttgcctgtgccggcctcTTCG‑Cgg                                                                                                                                                <  5:225698‑M1/7‑1 (MQ=255)       tgatttcgccgtacagctattcgacctatcgtggaagctagttggtcgctagaagaatcttcgtaggtcctttggcccgctctcacactggcgggctttttttcgtctgctgttttttgcgttgcctgtgccggcctcTTCG‑Cgg                                                                                                                                                >  6:225698‑M1/139‑145 (MQ=255)                     ccGCTCCTACAACGGTGGTGGACAGTTGGATACAGCCCGCCGTAGGAGCGGGTTCACCCGCGAAGAGGTACCGGCCATCCTGGCAAAACCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATACG‑CGGGTAAACCCGC‑TCCAACCa                                                                                                                             >  1:267201/1‑149 (MQ=18)                     ccGCTCCTACAACGGTGGTGGACAGTTGGATACAGCCCGCCGTAGGAGCGGGTTCACCCGCGAAGAGG‑‑CCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCG‑CGGGTAAACCCTC‑TCATACCaag                                                                                                                           >  8:68429/1‑147 (MQ=255)                       gcgccTACAACGGTGGTGGACAGGTGCACACAGCCCGCCGTAGGAGCGGGTTCACCCGCGAAGAGG‑‑CCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCG‑CGGGTAAACCCGC‑TCCTACCACggg                                                                                                                         <  7:8335/146‑1 (MQ=255)                          ccTACAACGGTGGTGGACAGTTGGATACAGCCCGCCGTAGGAGCGGGTTCACCCGCGAAGAGG‑‑CCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCG‑CGGGTAAACCCGC‑TCCTACCACGGGG‑T‑‑g                                                                                                                   >  8:209084/1‑149 (MQ=255)                              cAACGGTGGTGGACAGTTGGATACAGCCCGCCGTAGGAGCGGGTTCACCCGCGAAGAGG‑‑CCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCG‑CGGGTAAACCCGC‑TCCTACCACGGGG‑T‑‑GGa                                                                                                                 <  5:149629/147‑1 (MQ=255)                              cAACGGTGGTGGACAGTTGGATACAGCCCGCCGTAGGAGCGGGTTCACCCGCGAAGAGG‑‑CCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCG‑CGGGTAAACCCGC‑TCCTACCACGGGG‑T‑‑GGa                                                                                                                 <  7:209084/147‑1 (MQ=255)                               aaCGGTGGTGGACAGTTGGATAGAGCCCGCCGTAGGAGCGGTTTCACCCGCGAAGAGG‑‑CCGGCCCTGCTGGCCAATCCATACCCGCCGTTCCCCGTTGCCGCCACCACCGCAATCG‑CGGGTAAACCCGC‑TCCTACCACGGGG‑T‑‑GGACAg                                                                                                              >  7:205499/1‑149 (MQ=17)                                    tggcggACAGTTGGATACAGCCCGCCGTAGGAGCGGGTTCACCCGCGAAGAGG‑‑CCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCG‑CGGGTAAACACGC‑TCCTACCACGGGG‑T‑‑TGACAGTTGGa                                                                                                         <  8:205499/149‑1 (MQ=255)                                      tggaagctagttggtcgctagaagaatcttcgtaggtcctttggcccgctctcacactggcgggctttttttcgtctgctgttttttgcgttgcctgtgccggcctcTTCG‑Cggg                                                                                                                                               >  3:53778‑M1/108‑115 (MQ=255)                                      tggaagctagttggtcgctagaagaatcttcgtaggtcctttggcccgctctcacactggcgggctttttttcgtctgctgttttttgcgttgcctgtgccggcctcTTCG‑Cggg                                                                                                                                               <  4:53778‑M1/8‑1 (MQ=255)                                            aGTTGGATACAGCCCGCCGTAGGAGCGGGTTCACCCGCGAAGAGG‑‑CCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCG‑CGGGTAAACCCGC‑TCCTACCACGGGG‑T‑‑GGACAGTTGGACACAGccc                                                                                                 >  2:103068/1‑149 (MQ=255)                                                ggATACAGCCCGCCGTAGGAGCGGGTTCACCCGCGAAGAGG‑‑CCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCCCCGCATTCG‑CGGGTAAACCCGC‑TCCTAACACGGGG‑T‑‑GGACAGTTGGACACAGCCcgtcg                                                                                             >  5:124506/1‑149 (MQ=255)                                                 gATACAGCCCGCCGTAGGAGCGGGTTCACCCGCGAAGAGG‑‑CCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCGCCGGGTAAACCCGC‑TCCTACCACGGGG‑T‑‑GGACAGTTGGACACAGCCcgtc                                                                                              <  1:78164/148‑1 (MQ=255)                                                 gATACAGCCCGCCGTAGGAGCGGGTTCACCCGCGAAGAGG‑‑CCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCG‑CGGGTAAACCCGC‑TCCTACCACGGGG‑T‑‑g                                                                                                                   >  7:272304/1‑126 (MQ=255)                                                 gATACAGCCCGCCGTAGGAGCGGGTTCACCCGCGAAGAGG‑‑CCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCG‑CGGGTAAACCCGC‑TCCTACCACGGGG‑T‑‑g                                                                                                                   <  8:272304/126‑1 (MQ=255)                                                  aTACAGCCCGCCGTAGGAGCTGGTTCACCCGCGAAGAGG‑‑CCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCG‑CGGGTAAACCCGC‑TCCTACCACGGGG‑T‑‑GGACAGTTGGACACAGCCcgtcgt                                                                                            <  3:39670/148‑1 (MQ=255)                                                     cAGCCCGCCGTAGGAGCGGGTTCACCCGCGAAGTGG‑‑CCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCG‑CGGGTAAACCCGC‑TCCTACCACGGGG‑T‑‑GGACAGTTGGACACAGCCCGTCGTAGGa                                                                                        <  3:41669/149‑1 (MQ=255)                                                      aGCCCGCCGTAGGAGCGGGTTCACCCGCGAAGAGG‑‑CCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCG‑CGGGTAAACCCGC‑TCCTACCACGGGG‑T‑‑GGACAGTTGGACACAGCCCGTCGTAGGAg                                                                                       >  6:104984/1‑149 (MQ=255)                                                           gccgTAGGAGCGGGTTCACCCGCGAAGAGG‑‑CCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCG‑CGGGTAAACCCGC‑TCCTACCACGGGG‑T‑‑GGACAGtt                                                                                                            >  5:137120/1‑123 (MQ=255)                                                           gccgTAGGAGCGGGTTCACCCGCGAAGAGG‑‑CCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCG‑CGGGTAAACCCGC‑TCCTACCACGGGG‑T‑‑GGACAGtt                                                                                                            <  6:137120/123‑1 (MQ=255)                                                           gccgTAGGAGCGGGTTCACCCGCGAAGAGG‑‑CCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCG‑CGGGTAAACCCGC‑TCCTACCACGGGG‑T‑‑GGACAGTTGGACACAGCCCGTCGTAGGAGCGGGt                                                                                  >  6:115114/1‑149 (MQ=255)                                                            agaatcttcgtaggtcctttggcccgctctcacactggcgggctttttttcgtctgctgttttttgcgttgcctgtgccggcctcTTCG‑CGGGTAAACCCGC‑TCCTACCACGGGG‑T‑‑GGACAGTTGGACACAGCCCGTCGTAGGAGCggg                                                                                   >  1:297940‑M1/86‑149 (MQ=255)                                                              gTAGGAGCGGGTTCACCCGCGAAGAGG‑‑CCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCG‑CGGGTAAACCCGC‑TCCTACCACGGGG‑T‑‑GGACAGTTGGACACAGCCCGTCGTa                                                                                           <  2:319682/137‑1 (MQ=255)                                                              gTAGGAGCGGGTTCACCCGCGAAGAGG‑‑CCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCG‑CGGGTAAACCCGC‑TCCTACCACGGGG‑T‑‑GGACAGTTGGACACAGCCCGTCGTa                                                                                           >  1:319682/1‑137 (MQ=255)                                                                aGGCGCGGGTTCACCCGCGAAGAGG‑‑CCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCG‑CGGGTAACCCCGC‑TCCTACCCCGGGG‑T‑‑GGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCAcc                                                                             <  7:120300/149‑1 (MQ=255)                                                                  gAGCGGGTTCACCCGCGAAGAGG‑‑CCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCG‑CGGGTAAACCCGC‑TCCTACCACGGGG‑T‑‑g                                                                                                                   >  1:157352/1‑109 (MQ=255)                                                                  gAGCGGGTTCACCCGCGAAGAGG‑‑CCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCG‑CGGGTAAACCCGC‑TCCTACCACGGGG‑T‑‑g                                                                                                                   <  2:157352/109‑1 (MQ=255)                                                                    gCGGGTTCACCCGCGAAGAGG‑‑CCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCG‑CGGGTAAACCCGC‑TCCTACCACGGGG‑T‑‑GGACAGTTGGACACAGCCCGTCGTAGGAGc                                                                                      >  8:191690/1‑136 (MQ=255)                                                                    gCGGGTTCACCCGCGAAGAGG‑‑CCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCG‑CGGGTAAACCCGC‑TCCTACCACGGGG‑T‑‑GGACAGTTGGACACAGCCCGTCGTAGGAGc                                                                                      <  7:191690/136‑1 (MQ=255)                                                                    gCGGGTTCACCCGCGAAGAGG‑‑CCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCG‑CGGGTAAACCCGC‑TCCTACCAAGGGG‑T‑‑GGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCcgc                                                                          >  3:304123/1‑148 (MQ=255)                                                                          gaaCCCGCGAAGAGG‑‑CCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCG‑CGGGTAAACCCGC‑TCCTACCACGGGG‑T‑‑GGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCAcc                                                                             >  6:72632/3‑139 (MQ=255)                                                                          gaaCCCGCGAAGAGG‑‑CCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCG‑CGGGTAAACCCGC‑TCCTACCACGGGG‑T‑‑GGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCAcc                                                                             <  5:72632/137‑1 (MQ=255)                                                                            aCCCGCGAAGAGG‑‑CCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCG‑CGGGTAAACCCGC‑TCCTACCACGGGG‑T‑‑GGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGcc                                                                 >  7:118318/1‑149 (MQ=255)                                                                             tttggcccgctctcacactggcgggctttttttcgtctgctgttttttgcgttgcctgtgccggcctcTTCG‑CGGGTAAACCCGC‑TCCTACCACGGGG‑T‑‑GGACAGTTGGACACAGCCCGTCGTAGGa                                                                                        >  5:12261‑M1/69‑127 (MQ=255)                                                                             tttggcccgctctcacactggcgggctttttttcgtctgctgttttttgcgttgcctgtgccggcctcTTCG‑CGGGTAAACCCGC‑TCCTACCACGGGG‑T‑‑GGACAGTTGGACACAGCCCGTCGTAGGa                                                                                        <  6:12261‑M1/59‑1 (MQ=255)                                                                              ccGCGAAGAGG‑‑CCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCG‑CGGGTAAACCCGC‑TCCTACCACGGGG‑T‑‑GGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCgg                                                               >  1:242729/1‑149 (MQ=255)                                                                              ccGCGAAGAGG‑‑CCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCG‑CGGGTAAACCCGC‑TCCTAACACGGGG‑T‑‑GGACAGTTGGACACACCCCGTCGTAGGAGCGGGTTCACCCGCGAAGACGcccg                                                               >  4:161248/1‑147 (MQ=255)                                                                                gcgAAGAGG‑‑CCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCG‑CGGGTAAACCCGA‑TCCTACCACGGGG‑T‑‑GGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTAACCCGCGAAGAGGCCGGcc                                                             >  3:223852/1‑148 (MQ=255)                                                                                 cgAAGAGG‑‑CCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCG‑CGGGTAAACCCGC‑TCCTACCACggg                                                                                                                         >  7:136639/1‑91 (MQ=255)                                                                                 cgAAGAGG‑‑CCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCG‑CGGGTAAACCCGC‑TCCTACCACggg                                                                                                                         <  8:136639/91‑1 (MQ=255)                                                                                        g‑‑ccggccCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCG‑CGGGTAAACCCGC‑TCATACCACGGGG‑T‑‑GGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTAACCCGCGAAGAGGCCGGCACAGGCAAc                                                     >  5:1852/1‑149 (MQ=255)                                                                                             ggccCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCG‑CGGGTAAACCCGC‑TCCTACCACGGGG‑T‑‑GGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGc                                                   >  2:75075/1‑148 (MQ=255)                                                                                             ggccCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCG‑CGGGTAAACCCGC‑TCCTACCACGGGG‑T‑‑GGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGc                                                   >  5:231584/1‑148 (MQ=255)                                                                                                       gCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCTCATTCG‑CGGGTAAACCCGCTTCCTACCACGGGGCTACCGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAAc                                            <  1:103068/149‑1 (MQ=18)                                                                                                       gCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCG‑CGGGTAAACCCGC‑TCCTACCACGGGG‑T‑‑GGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAAcag                                          >  4:106871/1‑147 (MQ=255)                                                                                                          aaTCCCTACCCGCCTTTCTCAGTTGCCGTGAGCACCGCATTTG‑GGGGTAATCCAGC‑TGATACCTCGGGT‑T‑‑TGACAGTTGGACTCAGTCCTTCGTAGGTGCGGGTTCACCCGCGAAGAGGTGGGCAGAGGCAACGCAAAAAACTGCAGAc                                     <  6:1852/149‑1 (MQ=16)                                                                                                               cTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCG‑CGGGTAAACCCCC‑TACAAACACGGGG‑T‑‑GGACAGTTGGACACAGCCCGTAGTAGGAGCGGGTTCACCCGCGAAGACGCCGGCACAGGCAACGCAAAAAACAACAGACCaaa                                 >  8:126489/1‑148 (MQ=21)                                                                                                                  cccGCCGTTCACCGTTGCCGCCACCACCGCATTCG‑CGGGTAAACCCGC‑TCCTACCACGGGG‑T‑‑GGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGaaaaaaa                             <  2:200926/149‑1 (MQ=255)                                                                                                                  cccGCCGTTCACCGTTGCCGCCACCACCGCATTCG‑CGGGTAAACCCGC‑TCCTACCACGGGG‑T‑‑GGACAGTTGGACACAGCCCGGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGaaaaaaa                             >  8:208641/1‑149 (MQ=255)                                                                                                                  cccGCCGGTCTCCGTTGCCGCCACCACCGCATTCG‑CGGGTAAACCCGC‑TCCTACCACGGGG‑T‑‑GGACATTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGaaaaaaa                             <  6:124506/149‑1 (MQ=255)                                                                                                                      ccgTTCACCGTTGCCGCCACCACCGCATTCG‑CGGGTAAACCCGC‑TCCTACCACGGGG‑T‑‑GGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGccc                         <  6:290876/149‑1 (MQ=255)                                                                                                                      ccgTTCACCGTTGCCGCCACCACCGCATTCG‑CGGGTAAACCCGC‑TCCTACCACGGGG‑T‑‑GGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGccc                         <  4:304123/149‑1 (MQ=255)                                                                                                                         ttCACCGTTGCCGCCACCACCGCATTCG‑CGGGTAAACCCGC‑TCCTACCACGGGG‑T‑‑GGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGc                       >  5:190060/1‑148 (MQ=255)                                                                                                                            aCCGTTGCCGCCACCACCGCATTCG‑CGGGTAAACCCGC‑TCCTACCACGGGG‑T‑‑GGACAGTTGGACACAGCCCGTCGTATGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAgt                   >  6:308683/1‑149 (MQ=255)                                                                                                                              cGTTGCCGCCACCACCGCATTCG‑CGGGTAAACCCGC‑TCCTACCACGGGG‑T‑‑GGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAgtgt                 <  3:3948/149‑1 (MQ=255)                                                                                                                              cGTTGCCGCCACCACCGCATTCG‑CGGGTAAACCCGC‑TCCTACCACGGGG‑T‑‑GGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAgtat                 <  1:75075/149‑3 (MQ=255)                                                                                                                                            ccGCATTCG‑CGGGTAAACCCGC‑TCCTACCACGGGG‑T‑‑GGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCa     >  3:66359/1‑147 (MQ=255)                                                                                                                                             cGCATTCG‑CGGGTAAACCCGC‑TCCTACCACGGGG‑T‑‑GGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAg  >  4:271470/1‑149 (MQ=255)                                                                                                                                                 |                                                                                                                                                      CACCGTATTCGCGGGTAAACCCGCTCCTACAACGGTGGTGGACAGTTGGATACAGCCCGCCGTAGGAGCGGGTTCACCCGCGAAGAGG‑‑CCGGCCCTGCTGGCCAATCCCTACCCGCCGTTCACCGTTGCCGCCACCACCGCATTCG‑CGGGTAAACCCGC‑TCCTACCACGGGG‑T‑‑GGACAGTTGGACACAGCCCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAACGCAAAAAACAGCAGACGAAAAAAAGCCCGCCAGTGTGAGAGCGGGCCAAAG  >  NC_002947/4876284‑4876570

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.