| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5258442 | 58 (1.120) | 4 (0.080) | 4/244 | NT | 7.2% | coding (715/1212 nt) | PP_4635 | trans‑2‑enoyl‑CoA reductase |
| ? | NC_002947 | = 5258487 | 49 (1.010) | coding (670/1212 nt) | PP_4635 | trans‑2‑enoyl‑CoA reductase | |||||
ACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5258330‑5258442‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaccgtgGCCTTCAGCTATATCGGCAGCGATATCACCTGGCCGATCTACTGGCACGGTGCACTGGGCCAGGCCAAGCAGGACCTGGACGAAACCGCCCTGCGTCTGAACCAGAAGCTGGCCGGTGAAGTGAAAGGCGGCGCCAATGTGGCG < NC_002947/5258487‑5258344 ACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGGCCTTCAGCTATATCGGCAGCGATATCACCTGGCC > 4:266826/1‑148 ATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGGCCTTCAGCTATATCGGCAGCGATATCACCTGGCCGATCTACTGGCACGGTGCACT < 3:266826/149‑1 ATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGGCCTTCAGCTATATCGGCAGCGATATCACCTGGCCGATCTACTGGCACGGTG > 5:165091/1‑145 ATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGGCCTTCAGCTATATCGGCAGCGATATCACCTGGCCGATCTACTGGCACGGTG < 6:165091/145‑1 CCGTGGCCTTCAGCTATATCGGCAGCGATATCACCTGGCCGATCTACTGGCACGGTGCACTGGGCCAGGCCAAGCAGGACCTGGACGAAACCGCCCTGCGTCTGAACCAGAAGCTGGCCGGTGAAGTGAAAGGCGGCGCCAATGTGGCG < 8:28766/149‑1 TGGCCTTCAGCTATATCGGCAGCGATATCACCTGGCCGATCTACTGGCACGGTGCACTGGGCCAGGCCAAGCAGGACCTGGACGAAACCGCCCTGCGTCTGAACCAGAAGCTGGCCGGTGAAGTGAA < 7:115650/127‑1 TGGCCTTCAGCTATATCGGCAGCGATATCACCTGGCCGATCTACTGGCACGGTGCACTGGGCCAGGCCAAGCAGGACCTGGACGAAACCGCCCTGCGTCTGAACCAGAAGCTGGCCGGTGAAGTGAA > 8:115650/1‑127 ACCGACTTGAGCACCGCCACATTGGCGCCGCCTTTCACTTCACCGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5258330‑5258442‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaccgtgGCCTTCAGCTATATCGGCAGCGATATCACCTGGCCGATCTACTGGCACGGTGCACTGGGCCAGGCCAAGCAGGACCTGGACGAAACCGCCCTGCGTCTGAACCAGAAGCTGGCCGGTGAAGTGAAAGGCGGCGCCAATGTGGCG < NC_002947/5258487‑5258344 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |