| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5493394 = | 52 (1.010) | 4 (0.080) | 4/248 | NT | 8.0% | coding (622/1698 nt) | cobJ | precorrin‑3B C17‑methyltransferase |
| ? | NC_002947 | 5493483 = | 43 (0.870) | coding (533/1698 nt) | cobJ | precorrin‑3B C17‑methyltransferase | |||||
CTGCAGCTGGCGCAGTTGCCCGCCAGCGAAGCGGCGCAGCGCACCATCCATGTGGGGCATCAGGCGCGCCCGGCCAACCGCGACGAGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5493484‑5493394‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agctgcAGCCACGGGGCGTTACCTTCGATGCGCACAGACTCACCCGCCAGCAAGTCGGATACAAAGCGCTTGCCTTGCTCGATGTCGGCCAATGCATAGCCCTGCGGCGGGTTCAGCAGGCAAGTACCGAAGCGCAGCTCGCCACTGGTGGT > NC_002947/5493483‑5493628 CTGCAGCTGGCGCAGTTGCCCGCCAGCGAAGCGGCGCAGCGCACCATCCATGTGGGGCATCAGGCGCGCCCGGCCAACCGCGACGAGCTGCAGCCACGGGGCGTTACCTTCGATGCGCACAGACTCACCCGCCAGCAAGTCGGATACA > 8:71390/1‑148 TGCAGCTGGCGCAGTTGCCCGCCAGCGAAGCGGCGCAGCGCACCATCCATGTGGGGCATCAGGCGCGCCCGGCCAACCGCGACGAGCTGCAGCCACGGGGCGTTACCTTCGATGCGCACAGACTCACCCGCCAGCAAGTCGGATACA > 7:190920/1‑147 CAGCGAAGCGGCGCAGCGCACCATCCATGTGGGGCATCAGGCGCGCCCGGCCAACCGCGACGAGCTGCAGCCACGGGGCGTTACCTTCGATGCGCACAGACTCACCCGCCAGCAAGTCGGATACAAAGCGCTTGCCTTGCTCGATGTCG < 8:190920/149‑1 GGGCATCAGGCGCGCCCGGCCAACCGCGACGAGCTGCAGCCACGGGGCGTTACCTTCGATGCGCACAGACTCACCCGCCAGCAAGTCGGATACAAAGCGCTTGCCTTGCTCGATGTCGGCCAATGCATAGCCCTGCGGCGGGTTCAGCA < 7:71390/149‑1 AGCTGCAGCCACGGGGCGTTACCTTCGATGCGCACAGACTCACCCGCCAGCAAGTCGGATACAAAGCGCTTGCCTTGCTCGATGTCGGCCAATGCATAGCCCTGCGGCGG > 1:167873/1‑110 AGCTGCAGCCACGGGGCGTTACCTTCGATGCGCACAGACTCACCCGCCAGCAAGTCGGATACAAAGCGCTTGCCTTGCTCGATGTCGGCCAATGCATAGCCCTGCGGCGG < 2:167873/110‑1 GCTGCAGCCACGGGGCGTTACCTTCGATGCGCACAGACTCACCCGCCAGCAAGTCGGATACAAAGCGCTTGCCTTGCTCGATGTCGGCCAATGCATAACCCTGCGGCGGGTTCAGCAGGCAAGTACCGAAGCGCAGCTCGCCACTGGTG < 5:307834/149‑1 CTGCAGCCACGGGGCGTTACCTTCGATGCGCACAGACTCACCCGCCAGCAAGTCGGATACAAAGCGCTTGCCTTGCTCGATGTCGGCCAATGCATAGCCCTGCGGCGGGTTCAGCAGGCAAGTACCGAAGCGCAGCTCGCCACTGGTGG < 6:172830/149‑1 CTGCAGCCACGGGGCGTTACCTTCGATGCGCACAGACTCACCCGCCAGCAAGTCGGATACAAAGCGCTTGCCTTGCTCGATGTCGGCCAATGCATAGCCCTGCGGCGGGTTCAGCAGGCAAGTACCGAAGCGCAGCTCGCCACTGGTGG < 7:243948/149‑1 TGCAGCCACGGGGCGTTACCTTCGATGCGCACAGACTCACCCGCCAGCAAGTCGGATACAAAGCGCTTGCCTTGCTCGATGTCGGCCAATGCATAGCCCTGCGGCGGGTTCAGCAGGCAAGTACCGAAGCGCAGCTCGCCACTGGTGGT > 6:64441/1‑149 CTGCAGCTGGCGCAGTTGCCCGCCAGCGAAGCGGCGCAGCGCACCATCCATGTGGGGCATCAGGCGCGCCCGGCCAACCGCGACGAGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5493484‑5493394‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agctgcAGCCACGGGGCGTTACCTTCGATGCGCACAGACTCACCCGCCAGCAAGTCGGATACAAAGCGCTTGCCTTGCTCGATGTCGGCCAATGCATAGCCCTGCGGCGGGTTCAGCAGGCAAGTACCGAAGCGCAGCTCGCCACTGGTGGT > NC_002947/5493483‑5493628 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |