| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5499268 | 49 (0.950) | 5 (0.100) | 4/242 | NT | 11.2% | coding (46/720 nt) | cobK | precorrin‑6x reductase |
| ? | NC_002947 | = 5499329 | 34 (0.710) | coding (107/720 nt) | cobK | precorrin‑6x reductase | |||||
GTGTGTGCCCACGCCCTGGCCTTCGCCCGTAGCGTCGTGCCGGCGCAGGTGCACGTGGAAGTGTTCGCCATCGACCGCCAAGGCGGCATCGTCGGCCAGGCGGGTGTGCAATGACTGCGCGCATCCTGTTGCTGGGAGGGGTCACTGAAGCCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5499113‑5499268‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagccctggGGCACGCGGCCGATACCGGCCAGGCTGTAGACATGTCGAGGCCCGAGTTGGCGGGCCATCGCCAGGGCTTCAGTGACCCCTCCCAGCAACAGGATGCGCGCAGTCATTGCACACCCGCCTGGCCGACGATGCCGCCTTGGCGGTCGAT < NC_002947/5499329‑5499182 GTGTGTGCCCACGCCCTGGCCTTCGCCCGTAGCGTCGTGCCGGCGCAGGTGCACGTGGAAGTGTTCGCCATCGACCGCCAAGGCGGCATCGTCGGCCAGGCGGGTGTGCAATGACTGCGCGCATCCTGTTGCTGGGAGGGGTCACTGAA < 1:74605/149‑1 GTGCCCACGCCCTGGCCTTCGCCCGTAGCGTCGTGCCGGCGCAGGTGCACGTGGAAGTGTTCGCCATCGACCGCCAAGGCGGCATCGTCGGCCAGGCGGGTGTGCAATGACTGCGCGCATCCTGTTGCTGGGAGGGGTCACTGAAGCCC < 4:178925/149‑1 TTCGCCCGTAGCGTCGTGCCGGCGCAGGTGCACGTGGAAGTGTTCGCCATCGACCGCCAAGGCGGCATCGTCGGCCAGGCGGGTGTGCAATGACTGCGCGCATCCTGTTGCTGGGAGGGGTCACTGAAGCCCTGGGGCACGCGGCCGA > 8:258809/1‑148 GCGCAGGTGCACGTGGAAGTGTTCGCCATCGACCGCCAAGGCGGCATCGTCGGCCAGGCGGGTGTGCAATGACTGCGCGCATCCTGTTGCTGGGAGGGGTCACTGAAGCCCTGGGGCACGCGGCCGATACCGGCCAGGCTGTAGACATG > 2:262066/1‑149 CGCCAAGGCGGCATCGTCGGCCAGGCGGGTGTGCAATGACTGCGCGCATCCTGTTGCTGGGAGGGGTCACTGAAGCCCTGGGGCACGCGGCCGATACCGGCCAGGCTGTAGACATGTCGAGGCCCGAGTTGGCGGGCCATCGCCAGGGC < 1:262066/149‑1 AAGGCGGCATCGTCGGCCAGGCGGGTGTGCAATGACTGCGCGCATCCTGTTGCTGGGAGGGGTCACTGAAGCCCTGGGGCACGCGGCCGATATCGGCCAGGCTGTAGACATGTCGAGGCCCGAGTTGGCGGGCCATCGCCAGGGCTTCA < 7:258809/149‑1 AAGGCGGCATCGTCGGCCAGGCGGGTGTGCAATGACTGCGCGCATCCTGTTGCTGGGAGGGGTCACTGAAGCCCTGGGGCACGCGGCCGATACCGGCCAGGCTGTAGACATGTCGAGGCCCGAGTTGGCGGGCCATCGCCAGGGCTTCA < 2:183972/149‑1 CCTGGGGCACGCGGCCGATACCGGCCAGGCTGTAGACATGTCGAGGCCCGAGTTGGCGGGCCATCGCCAGGGCTTCAGTGACCCCTCCCAGCAACAGGATGCGCGCAGTCATTGCACACCCGCCTGGCCGACGATGCCGCCTTGGCGGT > 4:178048/1‑149 CCTGGGGCACGCGGCCGATACCGGCCAGGCTGTAGACATGTCGAGGCCCGAGTTGGCGGGCCATCGCCAGGGCTTCAGTGACCCCTCCCAGCAACAGGATGCGCGCAGTCATTGCACACCCGCCTGGCCGACGATGCCGCCTTGGCGGT > 7:278309/1‑149 CTGGGGCACGCGGCCGATACCGGCCAGGCTGTAGACATGTCGAGGCCCGAGTTGGCGGGCCATCGCCAGGGCTTCAGTGACCCCTCCCAGCAACAGGATGCGCGCAGTCATTGCACACCCGCCTGGCCGACGATGCCGCCTTGGCGGTC < 8:245482/149‑1 GGGCACGCGGCCGATACCGGCCAGGCTGTAGACATGTCGAGGCCCGAGTTGGCGGGCCATCGCCAGGGCTTCAGTGACCCCTCCCAGCAACAGGATGCGCGCAGTCATTGCACACCCGCCTGGCCGACGATGCCGCCTTGGCGGTCGAT < 1:87550/149‑1 GTGTGTGCCCACGCCCTGGCCTTCGCCCGTAGCGTCGTGCCGGCGCAGGTGCACGTGGAAGTGTTCGCCATCGACCGCCAAGGCGGCATCGTCGGCCAGGCGGGTGTGCAATGACTGCGCGCATCCTGTTGCTGGGAGGGGTCACTGAAGCCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5499113‑5499268‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagccctggGGCACGCGGCCGATACCGGCCAGGCTGTAGACATGTCGAGGCCCGAGTTGGCGGGCCATCGCCAGGGCTTCAGTGACCCCTCCCAGCAACAGGATGCGCGCAGTCATTGCACACCCGCCTGGCCGACGATGCCGCCTTGGCGGTCGAT < NC_002947/5499329‑5499182 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |