| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5923411 | 46 (0.890) | 3 (0.060) | 3/246 | NT | 6.3% | coding (1020/2874 nt) | gcvP‑II | glycine dehydrogenase |
| ? | NC_002947 | = 5923437 | 45 (0.920) | coding (994/2874 nt) | gcvP‑II | glycine dehydrogenase | |||||
TAAGGGTGTCGAAGAAGTGCTGATTGAGGCGTTTGATGCCTTTGGCCTCAAGGCCGGCTGCCAGGATGAAGGTCAACCGGTGCACACGCTGCGCGATGCGTTGCAGGCCTTCCGGGCCGTGGTACACCGCGTAGAAGCCGGCAATGTTGGCCAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5923257‑5923411‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaacTCCAACATCTGCACGGCCCAGGTGCTGTTGGCCAACATTGCCGGCTTCTACGCGGTGTACCACGGCCCGGAAGGCCTGCAACGCATCGCGCAGCGTGTGCACCGGTTGACCTTCATCCTGGCAGCCGGCCTTGAGGCCAAAGGC < NC_002947/5923437‑5923294 TAAGGGTGTCGAAGAAGTGCTGATTGAGGCGTTTGATGCCTTTGGCCTCAAGGCCGGCTGCCAGGATGAAGGTCAACCGGTGCACACGCTGCGCGATGCGTTGCAGGCCTTCCGGGCCGTGGTACACCGCGTAGAAGCCGGCAATGTTG > 4:306607/1‑149TAAGGGTGTCGAAGAAGTGCTGATTGAGGCGTTTGATGCCTTTGGCCTCAAGGCCGGCTGCCAGGATGAAGGTCAACCGGTGCACACGCTGCGCGATGCGTTGCAGGCCTTCCGGGCCGTGGTACACCGCGTAGAAGCCGGCAATGTTG < 7:137280/149‑1 AGGGTGTCGAAGAAGTGCTGATTGAGGCGTTTGATGCCTTTGGCCTCAAGGCCGGCTGCCAGGATGAAGGTCAACCGGTGCACACGCTGCGCGATGCGTTGCAGGCCTTCCGGGCCGTGGTACACCGCGTAGAAGCCGGCAATGTTGG < 1:314675/148‑1 TGGCCTCAAGGCCGGCTGCCAGGATGAAGGTCAACCGGTGCACACGCTGCGCGATGCGTTGCAGGCCTTCCGGGCCGTGGTACACCGCGTAGAAGCCGGCAATGTTGGCCAACTCCAACATCTGCACGGCCCAGGTGCTGTTGGCCAA < 3:16058/148‑1 CCTCAAGGCCGGCTGCCAGGATGAAGGTCAACCGGTGCACACGCTGCGCGATGCGTTGCAGGCCTTCCGGGCCGTGGTACACCGCGTAGAAGCCGGCAATGTTGGCCAACTCCAACATCTGCACGGCCCAGGTGCTGTTGGCCAACATT > 5:230906/1‑149 CAAGGCCGGCTGCCAGGATGAAGGTCAACCGGTGCACACGCTGCGCGATGCGTTGCAGGCCTTCCGGGCCGTGGTACACCGCGTAGAAGCCGGCAATGTTGGCCAACTCCAACATCTGCACGGCCCAGGTGCTGTTGGCCAACATTGCC < 6:230906/149‑1 CCAACTCCAACATCTGCACGGCCCAGGTGCTGTTGGCCAACATTGCCGGCTTCTACGCGGTGTACCACGGCCCGGAAGGCCTGCAACGCATCGCGCAGCGTGTGCACCGGTTGACCTTCATCCTGGCAGCCGGCCTTGAGGCCAAAGGC < 4:258127/149‑1 CCAACTCCAACATCTGCACGGCCCAGGTGCTGTTGGCCAACATTGCCGGCTTCTACGCGGTGTACCACGGCCCGGAAGGCCTGCAACGCATCGCGCAGCGTGTGCACCGGTTGACCTTCATCCTGGCAGCCGGCCTTGAGGCCAAAGGC < 8:261847/149‑1 TAAGGGTGTCGAAGAAGTGCTGATTGAGGCGTTTGATGCCTTTGGCCTCAAGGCCGGCTGCCAGGATGAAGGTCAACCGGTGCACACGCTGCGCGATGCGTTGCAGGCCTTCCGGGCCGTGGTACACCGCGTAGAAGCCGGCAATGTTGGCCAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5923257‑5923411‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaacTCCAACATCTGCACGGCCCAGGTGCTGTTGGCCAACATTGCCGGCTTCTACGCGGTGTACCACGGCCCGGAAGGCCTGCAACGCATCGCGCAGCGTGTGCACCGGTTGACCTTCATCCTGGCAGCCGGCCTTGAGGCCAAAGGC < NC_002947/5923437‑5923294 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |