New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 592546746 (0.890)3 (0.060) 3/250 NT 5.8% coding (678/1083 nt) gcvT‑II aminomethyltransferase
?NC_002947 = 5925506 54 (1.090)coding (639/1083 nt) gcvT‑II aminomethyltransferase

CGCCGTGCTCGATTTCCGCAAGCAGGCCGACACGGCCGATGAAGTTGCGCTCGGCCGGTTCCCAGGCGATGCTCCAGCCCAGGTTGGAGGTGAGCGGGGTGTGGTTTTCGTCGATGTCCTGGCCGTACAGGTTCATGCCGGCTTCCAGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5925316‑5925467
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcCGGTATCGCCCCAAGCGGCCTGGGCGCCCGCGATACCCTGCGCCTG  <  NC_002947/5925506‑5925461
                                                                                                                                                                                                      
CGCCGTGCTCGATTTCCGCAAGCAGGCCGACACGGCCGATGAAGTTGCGCTCGGCCGGTTCCCAGGCGATGCTCCAGCCCAGGTTGGAGGTGAGCGGGGTGTGGTTTTCGTCGATGTCCTGGCCGTACAGGTTCATGCCGGCTTCCAGG                                                   >  3:132391/1‑149
                                           GTTGCGCTCGGGCGGTTCCCAGGCGATGCTCCAGCCCAGGTTGGAGGTGAGCGGGGTGTGGTTTTCGTCGATGTCCTGGCCGTACAGGTTCATGCCGGCTTCCAGG                                                   <  5:46694/106‑1
                                           GTTGCGCTCGGCCGGTTCCCAGGCGATGCTCCAGCCCAGGTTGGAGGTGAGCGCGGTGTGGTTTTCGTCGATGTCCTGGCCGTACAGGTTCATGCCGGCTTCCAGG                                                   >  6:46694/1‑106
                                               CGCTCGGCCGGTTCCCAGGCGATGCTCCAGCCCAGGTTGGAGGTGAGCGGGGTGTGGTTTTCGTCGATGTCCTGGCCGTGCAGGTTCATGCCGGCTTCCAGGCGCCGGTATCGCCCCAAGCGGCCTGGGCGCCCGCGATACCCTGCGC     <  3:78718/148‑1
                                                              CAGGCGATGCTCCAGCCCAGGTTGGAGGTGAGCGGGGTGTGGTTTTCGTCGATGTCCTGGCCGTACAGGTTCATGCCGGCTTCCAGGCGCCGGTATCGCCCCAAGCGGCCTGGGCGCCCGCGATACCCTGCGCCTG  <  7:181196/136‑1
                                                              CAGGCGATGCTCCAGCCCAGGTTGGAGGTGAGCGGGGTGTGGTTTTCGTCGATGTCCTGGCCGTACAGGTTCATGCCGGCTTCCAGGCGCCGGTATCGCCCCAAGCGGCCTGGGCGCCCGCGATACCCTGCGCCTG  >  8:181196/1‑136
                                                                                                                                                                                                      
CGCCGTGCTCGATTTCCGCAAGCAGGCCGACACGGCCGATGAAGTTGCGCTCGGCCGGTTCCCAGGCGATGCTCCAGCCCAGGTTGGAGGTGAGCGGGGTGTGGTTTTCGTCGATGTCCTGGCCGTACAGGTTCATGCCGGCTTCCAGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5925316‑5925467
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcCGGTATCGCCCCAAGCGGCCTGGGCGCCCGCGATACCCTGCGCCTG  <  NC_002947/5925506‑5925461

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.