New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5925467 | 46 (0.890) | 3 (0.060) | 3/250 | NT | 5.8% | coding (678/1083 nt) | gcvT‑II | aminomethyltransferase |
? | NC_002947 | = 5925506 | 54 (1.090) | coding (639/1083 nt) | gcvT‑II | aminomethyltransferase |
CGCCGTGCTCGATTTCCGCAAGCAGGCCGACACGGCCGATGAAGTTGCGCTCGGCCGGTTCCCAGGCGATGCTCCAGCCCAGGTTGGAGGTGAGCGGGGTGTGGTTTTCGTCGATGTCCTGGCCGTACAGGTTCATGCCGGCTTCCAGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5925316‑5925467 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcCGGTATCGCCCCAAGCGGCCTGGGCGCCCGCGATACCCTGCGCCTG < NC_002947/5925506‑5925461 CGCCGTGCTCGATTTCCGCAAGCAGGCCGACACGGCCGATGAAGTTGCGCTCGGCCGGTTCCCAGGCGATGCTCCAGCCCAGGTTGGAGGTGAGCGGGGTGTGGTTTTCGTCGATGTCCTGGCCGTACAGGTTCATGCCGGCTTCCAGG > 3:132391/1‑149 GTTGCGCTCGGGCGGTTCCCAGGCGATGCTCCAGCCCAGGTTGGAGGTGAGCGGGGTGTGGTTTTCGTCGATGTCCTGGCCGTACAGGTTCATGCCGGCTTCCAGG < 5:46694/106‑1 GTTGCGCTCGGCCGGTTCCCAGGCGATGCTCCAGCCCAGGTTGGAGGTGAGCGCGGTGTGGTTTTCGTCGATGTCCTGGCCGTACAGGTTCATGCCGGCTTCCAGG > 6:46694/1‑106 CGCTCGGCCGGTTCCCAGGCGATGCTCCAGCCCAGGTTGGAGGTGAGCGGGGTGTGGTTTTCGTCGATGTCCTGGCCGTGCAGGTTCATGCCGGCTTCCAGGCGCCGGTATCGCCCCAAGCGGCCTGGGCGCCCGCGATACCCTGCGC < 3:78718/148‑1 CAGGCGATGCTCCAGCCCAGGTTGGAGGTGAGCGGGGTGTGGTTTTCGTCGATGTCCTGGCCGTACAGGTTCATGCCGGCTTCCAGGCGCCGGTATCGCCCCAAGCGGCCTGGGCGCCCGCGATACCCTGCGCCTG < 7:181196/136‑1 CAGGCGATGCTCCAGCCCAGGTTGGAGGTGAGCGGGGTGTGGTTTTCGTCGATGTCCTGGCCGTACAGGTTCATGCCGGCTTCCAGGCGCCGGTATCGCCCCAAGCGGCCTGGGCGCCCGCGATACCCTGCGCCTG > 8:181196/1‑136 CGCCGTGCTCGATTTCCGCAAGCAGGCCGACACGGCCGATGAAGTTGCGCTCGGCCGGTTCCCAGGCGATGCTCCAGCCCAGGTTGGAGGTGAGCGGGGTGTGGTTTTCGTCGATGTCCTGGCCGTACAGGTTCATGCCGGCTTCCAGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5925316‑5925467 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcCGGTATCGCCCCAAGCGGCCTGGGCGCCCGCGATACCCTGCGCCTG < NC_002947/5925506‑5925461 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |