New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	80983 =	48 (0.930)	4 (0.080)	4/240	NT	8.7%	intergenic (+40/‑94)	tsaC/PP_5425	threonylcarbamoyl‑AMP synthase/hypothetical protein
	?	NC_002947	81062 =	40 (0.840)					intergenic (+119/‑15)	tsaC/PP_5425	threonylcarbamoyl‑AMP synthase/hypothetical protein

GTACTTCCATGGCCAGTTGGACCTGGTGCTTGGCGGGGCGCTGGGCGGGCGGAAGAACCCGAGTGTGATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATG  >  NC_002947/80835‑81119                                                                                                                                                     |                                                                                                                                         gTACTTCCATGGCCAGTTGGACCTGGTGCTTGGCGGGGCGCTGGGCGGGCGGAAGAACCCGAGTGTGATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCtgtg                                                                                                                                          >  1:70523/1‑149 (MQ=255)  tACTTCCATGGCCAGTTGGACCTGGTGCTTGGCGGGGCGCTGGGCGGGCGGAAGAACCCGAGTGTGATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTgg                                                                                                                                         >  8:117860/1‑149 (MQ=255)    tatcccctttcgggatgatggaatagagctctgccttgggcttgcgggccgtcagttcaaaaatcgcctcatcgaagacctcgttaccatagccatcatcgcgaccaaacgtgctgcgaagggcagtcatgtgcgtgacactttcGGGa                                                                                                                                       <  3:307706‑M1/4‑1 (MQ=255)     ttCCATGGCCAGTTGGACCTGGTGCTTGGCGGGGCGCTGGGCGGGCGGAAGAACCCGAGTGTGATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAg                                                                                                                                      >  1:221911/1‑149 (MQ=255)     ttCCATGGCCAGTTGGACCTGGTGCTTGGCGGGGCGCTGGGCGGGCGGAAGAACCCGAGTGTGATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAg                                                                                                                                      >  7:261237/1‑149 (MQ=255)     atcccctttcgggatgatggaatagagctctgccttgggcttgcgggccgtcagttcaaaaatcgcctcatcgaagacctcgttaccatagccatcatcgcgaccaaacgtgctgcgaagggcagtcatgtgcgtgacactttcGGGAg                                                                                                                                      <  1:71106‑M1/5‑1 (MQ=255)      tcccctttcgtgatgatggaatagagctctgccttgggcttgcgggccgtcagttcaaaaatcgcctcatcgaagacctcgttaccatagccatcatcgcgaccaaacgtgctgcgaagggcagtcatgtgcgtgacactttcGGGa                                                                                                                                       >  1:299633‑M1/144‑147 (MQ=255)      tcccctttcgggatgatggaatagagctctgccttgggcttgcgggccgtcagttcaaaaatcgcctcatcgaagacctcgttaccatagccatcatcgcgaccaaacgtgctgcgaagggcagtcatgtgcgtgacactttcGGGa                                                                                                                                       <  2:299633‑M1/4‑1 (MQ=255)       ccATGGCCAGTTGGACCTGGTGCTTGGCGGGGCGCTGGGCGGGCGGAAGAACCCGAGTGTGATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGc                                                                                                                                     <  7:19801/148‑1 (MQ=255)        ccctttcgggatgatggaatagagctctgccttgggcttgcgggccgtcagttcaaaaatcgcctcatcgaagacctcgttaccatagccatcatcgcgaccaaacgtgctgcgaagggcagtcatgtgcgtgacactttcGGGAGCgg                                                                                                                                   <  4:37171‑M1/8‑1 (MQ=255)        cATGGCCAGTTGGACCTGGTGCTTGGCGGGGCGCTGGGCGGGCGGAAGAACCCGAGTGTGATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCg                                                                                                                                    <  8:38154/148‑1 (MQ=255)         cctttcgggatgatggaatagagctctgccttgggcttgcgggccgtcagttcaaaaatcgcctcatcgaagacctcgttaccatagccatcatcgcgaccaaacgtgctgcgaagggcagtcatgtgcgtgacactttcGGGAGCggg                                                                                                                                  >  2:21184‑M1/141‑149 (MQ=255)                     aCCTGGTGCTTGGCGGGGCGCTGGGCGGGCGGAAGAACCCGAGTGTGATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCgaa                                                                                                                      <  2:159021/149‑1 (MQ=255)                             cTTGGCGGGGCGCTGGGCGGGCGGAAGAACCCGAGTGTGATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACaa                                                                                                              >  1:118516/1‑149 (MQ=255)                                   ggggCGCTGGGCGGGCGGAAGAACCCGAGTGTGATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGt                                                                                                        >  2:283053/1‑149 (MQ=255)                                    gggCGCTGGGCGGGCGGAAGAACCCGAGTGTGATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTg                                                                                                       <  2:108752/149‑1 (MQ=255)                                         cTGGGCGGGCGGAAGAACCCGAGTGTGATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAgg                                                                                                  >  8:286056/1‑149 (MQ=255)                                               gggcggAAGAACCCGAGTGTGATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACggg                                                                                            <  2:70523/149‑1 (MQ=255)                                                             gAGTGTGATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTc                                                                              <  7:286056/149‑1 (MQ=255)                                                                  tgATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCGAGGGTTGATACCAATCCACAGGCCTTTCTCGGGACTCGGGCTCCTGTTGGAGCGTGCGCTCCCGCGAAGAATACAACTCGTTGCCAGGCACGGGGTTCGGCCGTGTTcgctg                                                                          <  2:211766/148‑3 (MQ=255)                                                                  tgATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCgg                                                                          <  2:221911/148‑1 (MQ=255)                                                                  tgATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCgg                                                                          <  5:278027/148‑1 (MQ=255)                                                                    aTTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCa                                                                       >  6:17978/1‑149 (MQ=255)                                                                     ttCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGcct                                                                      >  8:158387/1‑147 (MQ=255)                                                                     ttCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCAt                                                                      >  5:113397/1‑149 (MQ=255)                                                                        tcatcgaagacctcgttaccatagccatcatcgcgaccaaacgtgctgcgaagggcagtcatgtgcgtgacactttcGGGAGCgg                                                                                                                                   <  3:61712‑M1/8‑1 (MQ=255)                                                                        tcatcgaagacctcgttaccatagccatcatcgcgaccaaacgtgctgcgaagggcagtcatgtgcgtgacactttcGGGAGCgg                                                                                                                                   >  4:61712‑M1/78‑85 (MQ=255)                                                                        gcgACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGc                                                                    <  2:118516/148‑1 (MQ=255)                                                                            ccTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCACGCt                                                               >  3:37171/1‑149 (MQ=255)                                                                                   ctcgttaccatagccatcatcgcgaccaaacgtgctgcgaagggcagtcatgtgcgtgacactttcGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATg                                                                     <  2:310561‑M1/70‑1 (MQ=255)                                                                                   ctcgttaccatagccatcatcgcgaccaaacgtgctgcgaagggcagtcatgtgcgtgacactttcGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATg                                                                     >  1:310561‑M1/67‑136 (MQ=255)                                                                                   aCCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGaaa                                                        <  6:113397/149‑1 (MQ=255)                                                                                   aCCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGaaa                                                        <  3:111709/149‑1 (MQ=255)                                                                                      ggCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAgtg                                                     >  2:71106/1‑149 (MQ=255)                                                                                       gCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAgtgt                                                    >  6:74290/1‑149 (MQ=255)                                                                                        cGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTc                                                   <  5:74290/149‑1 (MQ=255)                                                                                         gAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCa                                                  >  2:187371/1‑149 (MQ=255)                                                                                         gAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCa                                                  >  5:630/1‑149 (MQ=255)                                                                                           catagccatcatcgcgaccaaacgtgctgcgaagggcagtcatgtgcgtgacactttcGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGc                                                                        <  8:53124‑M1/67‑1 (MQ=255)                                                                                           catagccatcatcgcgaccaaacgtgctgcgaagggcagtcatgtgcgtgacactttcGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGc                                                                        >  7:53124‑M1/59‑125 (MQ=255)                                                                                             tCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGca                                              <  7:117860/149‑1 (MQ=255)                                                                                                   gCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCgt                                                                                  <  7:240874/107‑1 (MQ=255)                                                                                                   gCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCgt                                                                                  >  8:240874/1‑107 (MQ=255)                                                                                                    cccGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACt                                       >  5:116382/1‑149 (MQ=255)                                                                                                     ccGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCCGTGCCACGCACCGGCTTCGCCCGTCTTCGCGGGCATGCCCGCTACCCAAAGTGGCACGCCCATGAcag                                      >  3:8583/1‑147 (MQ=38)                                                                                                         gTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCt                                  >  1:202560/1‑149 (MQ=255)                                                                                                          ttGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCGCGAAAGTGTCACGCACATGACTGCCCtt                                 <  1:187371/149‑1 (MQ=255)                                                                                                             aTACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCg                               <  5:61169/148‑1 (MQ=255)                                                                                                               aCCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACg                                                                                              <  6:172087/83‑1 (MQ=255)                                                                                                               aCCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACg                                                                                              >  5:172087/1‑83 (MQ=255)                                                                                                               aCCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCgcag                            >  1:311586/1‑149 (MQ=255)                                                                                                                 cAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCgcagca                          <  2:311586/149‑1 (MQ=255)                                                                                                                 cAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCgcagca                          >  1:148933/1‑149 (MQ=255)                                                                                                                  aaTCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCAc                         <  6:116382/149‑1 (MQ=255)                                                                                                                            ccTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCg                               <  8:255679/133‑1 (MQ=255)                                                                                                                            ccTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTcgc               <  2:202560/149‑1 (MQ=255)                                                                                                                              tGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACg                                                <  5:196304/114‑1 (MQ=255)                                                                                                                              tGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACg                                                >  6:196304/1‑114 (MQ=255)                                                                                                                                  tCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCGTCGCCCGTGTTCGCGGGCATGCCCGCTGCCGAAAGTGTCCCGCACAGGACTGCCCTTCGCCGCCCGTTTGGTCGCgatgag         >  8:63946/1‑148 (MQ=37)                                                                                                                                    gggACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATgg       <  5:17978/149‑1 (MQ=255)                                                                                                                                    gggACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATgg       <  4:231383/149‑1 (MQ=255)                                                                                                                                    gggACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATgg       <  2:218246/149‑1 (MQ=255)                                                                                                                                      gACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGc      >  1:65395/1‑148 (MQ=255)                                                                                                                                         tCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATg  >  3:291457/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                         GTACTTCCATGGCCAGTTGGACCTGGTGCTTGGCGGGGCGCTGGGCGGGCGGAAGAACCCGAGTGTGATTCGCGACCTGGCAACCGGCGAAGTCGTTCGCCCGGGTTGATACCAATCCACAGGCCTGGCTCGGGACTCGGGCCCCTGTGGGAGCGGGCGCGCCCGCGAAGAATACAACTCGGTGCCAGGCACGGGCTTCGCCCGTGTTCGCGGGCATGCCCGCTCCCGAAAGTGTCACGCACATGACTGCCCTTCGCAGCACGTTTGGTCGCGATGATGGCTATG  >  NC_002947/80835‑81119

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.