New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 156459 | 48 (0.930) | 4 (0.080) | 4/246 | NT | 8.1% | coding (1267/1308 nt) | citN | citrate transporter |
? | NC_002947 | = 156485 | 45 (0.920) | coding (1241/1308 nt) | citN | citrate transporter |
AACCCAGATTTCCGGGCTGGTCAGCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGC‑GCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCTGAGCAGGTGTACCGGCTGCCCGACGATCGAC > NC_002947/156316‑156607 | aaCCCAGATTTCCGGGCTGGTCAGCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGC‑GCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAACATCCCCATCAGCAGTGCGCCGa < 7:205728/149‑1 (MQ=255) aGATTTACGGGCTGGTCAGCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGC‑GCGTCTCGTACGTGATACGGATGTATTAAAGACTACTGAAAAGAGGGAAAATACCCATCAGCAGTGCGACGAGCAt > 7:285230/1‑148 (MQ=255) aGAATTCCGGGCTGCTCAGCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGC‑GCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCAtt < 6:233382/149‑1 (MQ=255) gggCTGGTCAGCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGC‑GCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAg < 8:277620/149‑1 (MQ=255) aGCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGGCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATAc > 1:91041/1‑147 (MQ=255) gCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGC‑GCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGTCATACCAg < 1:57800‑M2/148‑2 (MQ=255) cATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGC‑GCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCtggtatgcctgtgcataatgctcggcgcactgctg < 6:313855‑M1/149‑36 (MQ=255) cATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGC‑GCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATg < 8:168176/127‑1 (MQ=255) cATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGC‑GCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATg > 7:168176/1‑127 (MQ=255) aTGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGC‑GCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCtggtatgcctgtgcataatgctcggcgcactgctga > 2:52181‑M1/1‑113 (MQ=255) aTGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGC‑GCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCa > 3:156502/1‑149 (MQ=255) tGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGC‑GCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCAc > 2:115173/1‑149 (MQ=255) tATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGC‑GCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCtggtatgcctgtgcataatgctcggcgcactgctgatgg < 1:52181‑M1/149‑40 (MQ=255) tATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGC‑GCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCtggtatgcctgtgcataatgctcggcgcactgctgatg < 4:10995‑M1/148‑39 (MQ=255) tATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGC‑GCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACt < 3:318138/148‑1 (MQ=255) ttttCCTTCGAGCCGTAATGGCAACGCGCCCCGGTCAGGGC‑GCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGa < 1:115173/149‑1 (MQ=255) cTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGC‑GCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGt < 2:57800/148‑1 (MQ=255) gTAATGGCAACGCGCCCCGGTCAGGGC‑GCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCtga > 1:128907/1‑149 (MQ=255) gaCGCGCCCTGACCGGGGC‑GCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGcc > 1:129235/2‑149 (MQ=255) aaCGCGCCCCGGTCAGGGC‑GCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGcc < 1:260910/149‑1 (MQ=255) aaCGCGCCCCGGTCAGGGC‑GCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGcc > 2:82692/1‑149 (MQ=255) cGGTCAGGGC‑GCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCa > 4:251242/1‑103 (MQ=255) cGGTCAGGGC‑GCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCa < 3:251242/103‑1 (MQ=255) cGGTCAGGGC‑GCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGa > 7:71252/1‑148 (MQ=255) cGGTCAGGGC‑GCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGAt < 6:213001/149‑1 (MQ=255) aGGGC‑GCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCgg < 2:147321/149‑1 (MQ=255) ggC‑GCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGc > 4:96255/1‑132 (MQ=255) ggC‑GCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGc < 3:96255/132‑1 (MQ=255) c‑gcgtcgcgtACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCCACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCa < 1:82692/149‑1 (MQ=255) gtcgcgtACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGc > 3:322029/1‑149 (MQ=255) gtACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCtgatga > 1:181150/1‑118 (MQ=255) gtACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCtgatga < 2:181150/118‑1 (MQ=255) gtACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTAc > 8:8449/1‑147 (MQ=255) cGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACcagca < 2:51702/149‑1 (MQ=255) tGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCagg > 2:126660/1‑149 (MQ=255) aTACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCagg > 8:32789/1‑147 (MQ=255) aCGGATGTATTAAAGAGTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCTG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCaggtag < 7:135890/148‑1 (MQ=255) cGGATGTATTAAAGACTACTGACCAGCGGGAAAATCCCCAGCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCaggtaggt < 1:239426/149‑1 (MQ=255) ggATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTa < 8:215114/135‑1 (MQ=255) ggATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTa > 7:215114/1‑135 (MQ=255) tAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTAc > 7:222327/1‑149 (MQ=255) ctactGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCgg < 8:222327/149‑1 (MQ=255) gAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGACCACGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCt > 7:142966/1‑147 (MQ=255) gAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCt > 7:200595/1‑147 (MQ=255) aaCAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCTGa < 1:126660/148‑1 (MQ=255) aaCAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCTGAg > 1:8823/1‑149 (MQ=255) aTCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCTGAGCAGgt < 6:118453/142‑1 (MQ=255) aTCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCTGAGCAGgt > 5:118453/1‑142 (MQ=255) tCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCt < 4:319663/133‑1 (MQ=255) tCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCt > 3:319663/1‑133 (MQ=255) cccATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCGAGGGCTAGCCGCAGGTAGGTGGAGGGTACCAGCTGGCGGAGCAGTTGTACCGGCTg > 4:243352/1‑149 (MQ=255) cccATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCTGAGCAGGTGTACCGGCTg > 7:77269/1‑149 (MQ=255) ccATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAgcactgctgatggggattttcccgctgttcagtagtctttaatacatccgtatcacgtacgcgacgcgccctgaccggggcgcgttgccattaccgctcgaaggaaaata < 1:52181‑M2/149‑111 (MQ=255) cATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAgcactgctgatggggattttcccgctgttcagtagtctttaatacatccgtatcacgtacgcgacgcgccctgaccggggcgcgttgccattaccgctcgaaggaaaata < 4:10995‑M2/148‑111 (MQ=255) tCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAgcactgctgatggggattttcccgctgttcagtagtctttaatacatccgtatcacgtacgcgacgcgccctgaccggggcgcgttgccattaccgctcgaaggaaaatacat > 2:52181‑M2/1‑36 (MQ=255) cagcagTGCGCCGAGCATTATGCACAGGCATACCAgcactgctgatggggattttcccgctgttcagtagtctttaatacatccgtatcacgtacgcgacgcgccctgaccggggcgcgttgccattaccgctcgaaggaaaatacatg < 6:313855‑M2/149‑115 (MQ=255) agcagTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCTGAGCAGGTGTACCGGCTGCCcgac < 8:200595/149‑1 (MQ=255) cagTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCTGAGCAGGTGTACCGGCTGCCcgacga > 1:222989/1‑149 (MQ=255) ctggtatgactgtgcataatgctcggcgcactgctgatggggattttcccgctgttcagtagtctttaatacatccgtatcacgtacgcgacgcgccctgaccggggcgcgttgccattaccgctcgaaggaaaatacatggaatggc < 1:57800‑M1/148‑148 (MQ=255) cgcCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCTCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCTGAGCAGGTGTACCGGCTGCCCGACGATCGAc < 3:243352/149‑1 (MQ=255) cgcCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCTGAGCAGGTGTACCGGCTGCCCGACGATc > 8:197774/1‑146 (MQ=255) cgcCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCTGAGCAGGTGTACCGGCTGCCCGACGATc < 7:197774/146‑1 (MQ=255) cgcCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCTGAGCAGGTGTACCGGCTGCCCGACGATCGAc < 4:322029/149‑1 (MQ=255) | AACCCAGATTTCCGGGCTGGTCAGCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGC‑GCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCTGAGCAGGTGTACCGGCTGCCCGACGATCGAC > NC_002947/156316‑156607 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |