New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 156459	48 (0.930)	4 (0.080)	4/246	NT	8.1%	coding (1267/1308 nt)	citN	citrate transporter
	?	NC_002947	= 156485	45 (0.920)					coding (1241/1308 nt)	citN	citrate transporter

GCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCTGAGCAGGTGTACCGGCTGCCCGACGATCGACGCACGGGCCATTTCCACCGGGGTGAT  >  NC_002947/156339‑156633                                                                                                                                                   |                                                                                                                                                      gCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGTCATACCAg                                                                                                                                                      <  1:57800‑M2/148‑2 (MQ=255)         aTGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCa                                                                                                                                            >  3:156502/1‑149 (MQ=255)          tGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCAc                                                                                                                                           >  2:115173/1‑149 (MQ=255)            tATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACt                                                                                                                                          <  3:318138/148‑1 (MQ=255)              ttttCCTTCGAGCCGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGa                                                                                                                                       <  1:115173/149‑1 (MQ=255)                   cTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGt                                                                                                                                   <  2:57800/148‑1 (MQ=255)                            gTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCtga                                                                                                                         >  1:128907/1‑149 (MQ=255)                                    gaCGCGCCCTGACCGGGGCGCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGcc                                                                                                                 >  1:129235/2‑149 (MQ=255)                                    aaCGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGcc                                                                                                                 <  1:260910/149‑1 (MQ=255)                                    aaCGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGcc                                                                                                                 >  2:82692/1‑149 (MQ=255)                                             cGGTCAGGGCGCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCa                                                                                                                                                       >  4:251242/1‑103 (MQ=255)                                             cGGTCAGGGCGCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCa                                                                                                                                                       <  3:251242/103‑1 (MQ=255)                                             cGGTCAGGGCGCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGa                                                                                                         >  7:71252/1‑148 (MQ=255)                                             cGGTCAGGGCGCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGAt                                                                                                        <  6:213001/149‑1 (MQ=255)                                                  aGGGCGCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCgg                                                                                                   <  2:147321/149‑1 (MQ=255)                                                    ggCGCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGc                                                                                                                  <  3:96255/132‑1 (MQ=255)                                                    ggCGCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGc                                                                                                                  >  4:96255/1‑132 (MQ=255)                                                      cgcgtcgcgtACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCCACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCa                                                                                                <  1:82692/149‑1 (MQ=255)                                                         gtcgcgtACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGc                                                                                            >  3:322029/1‑149 (MQ=255)                                                              gtACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCtgatga                                                                                                                      <  2:181150/118‑1 (MQ=255)                                                              gtACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCtgatga                                                                                                                      >  1:181150/1‑118 (MQ=255)                                                              gtACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTAc                                                                                         >  8:8449/1‑147 (MQ=255)                                                                 cGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACcagca                                                                                    <  2:51702/149‑1 (MQ=255)                                                                   tGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCagg                                                                                  >  2:126660/1‑149 (MQ=255)                                                                     aTACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCagg                                                                                  >  8:32789/1‑147 (MQ=255)                                                                       aCGGATGTATTAAAGAGTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCTG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCaggtag                                                                               <  7:135890/148‑1 (MQ=255)                                                                        cGGATGTATTAAAGACTACTGACCAGCGGGAAAATCCCCAGCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCaggtaggt                                                                             <  1:239426/149‑1 (MQ=255)                                                                         ggATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTa                                                                                          <  8:215114/135‑1 (MQ=255)                                                                         ggATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTa                                                                                          >  7:215114/1‑135 (MQ=255)                                                                                 tAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTAc                                                                    >  7:222327/1‑149 (MQ=255)                                                                                       ctactGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCgg                                                              <  8:222327/149‑1 (MQ=255)                                                                                            gAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGACCACGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCt                                                           >  7:142966/1‑147 (MQ=255)                                                                                            gAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCt                                                           >  7:200595/1‑147 (MQ=255)                                                                                             aaCAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCTGa                                                         <  1:126660/148‑1 (MQ=255)                                                                                             aaCAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCTGAg                                                        >  1:8823/1‑149 (MQ=255)                                                                                                         aTCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCTGAGCAGgt                                                   >  5:118453/1‑142 (MQ=255)                                                                                                         aTCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCTGAGCAGgt                                                   <  6:118453/142‑1 (MQ=255)                                                                                                          tCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCt                                                           >  3:319663/1‑133 (MQ=255)                                                                                                          tCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCt                                                           <  4:319663/133‑1 (MQ=255)                                                                                                            cccATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCGAGGGCTAGCCGCAGGTAGGTGGAGGGTACCAGCTGGCGGAGCAGTTGTACCGGCTg                                         >  4:243352/1‑149 (MQ=255)                                                                                                            cccATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCTGAGCAGGTGTACCGGCTg                                         >  7:77269/1‑149 (MQ=255)                                                                                                             ccATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAgcactgctgatggggattttcccgctgttcagtagtctttaatacatccgtatcacgtacgcgacgcgccctgaccggggcgcgttgccattaccgctcgaaggaaaata                                         <  1:52181‑M2/149‑111 (MQ=255)                                                                                                              cATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAgcactgctgatggggattttcccgctgttcagtagtctttaatacatccgtatcacgtacgcgacgcgccctgaccggggcgcgttgccattaccgctcgaaggaaaata                                         <  4:10995‑M2/148‑111 (MQ=255)                                                                                                                tCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAgcactgctgatggggattttcccgctgttcagtagtctttaatacatccgtatcacgtacgcgacgcgccctgaccggggcgcgttgccattaccgctcgaaggaaaatacat                                      >  2:52181‑M2/1‑36 (MQ=255)                                                                                                                 cagcagTGCGCCGAGCATTATGCACAGGCATACCAgcactgctgatggggattttcccgctgttcagtagtctttaatacatccgtatcacgtacgcgacgcgccctgaccggggcgcgttgccattaccgctcgaaggaaaatacatg                                     <  6:313855‑M2/149‑115 (MQ=255)                                                                                                                  agcagTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCTGAGCAGGTGTACCGGCTGCCcgac                                   <  8:200595/149‑1 (MQ=255)                                                                                                                    cagTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCTGAGCAGGTGTACCGGCTGCCcgacga                                 >  1:222989/1‑149 (MQ=255)                                                                                                                         cgcCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCTCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCTGAGCAGGTGTACCGGCTGCCCGACGATCGAc                            <  3:243352/149‑1 (MQ=255)                                                                                                                         cgcCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCTGAGCAGGTGTACCGGCTGCCCGACGATc                               >  8:197774/1‑146 (MQ=255)                                                                                                                         cgcCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCTGAGCAGGTGTACCGGCTGCCCGACGATc                               <  7:197774/146‑1 (MQ=255)                                                                                                                         cgcCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCTGAGCAGGTGTACCGGCTGCCCGACGATCGAc                            <  4:322029/149‑1 (MQ=255)                                                                                                                                   tATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCTGAGCAGGTGTACCGGCTGCCCGACGATCGACGCACGGGCCa                  >  3:264272/1‑149 (MQ=255)                                                                                                                                     tGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTATCAGCGGGCTGAGCAGGTGTACCGGCTGCCCGACGATCGACGCACGGGCCAtt                <  7:32789/149‑1 (MQ=255)                                                                                                                                        acaGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCTGAGCAGGTGTACCGGCTGCCCGACGATCGACGCACGGGCCATTTc              >  6:276957/1‑148 (MQ=255)                                                                                                                                          aGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCTGAGCAGGTGTACCGGCTGCCCGACGATCGACGCACGGGCCATTTCCAc           >  5:242462/1‑149 (MQ=255)                                                                                                                                                  cAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCTGAGCAGGTGTACCGGCTGCCCGACGATCGACGCACgg                      <  5:59461/130‑1 (MQ=255)                                                                                                                                                  cAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCTGAGCAGGTGTACCGGCTGCCCGACGATCGACGCACgg                      >  6:59461/1‑130 (MQ=255)                                                                                                                                                   aG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCTGAGCAGGTGTACCGGCTGCCCGACGATCGACGCACGGGCCATTTCCACCGGGGTGAt  >  3:101096/1‑149 (MQ=255)                                                                                                                                                   |                                                                                                                                                      GCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTATTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAG‑CACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATACCGGCCAGGGCTACCAGCAGGTAGGTGGAGGGTACCAGCGGGCTGAGCAGGTGTACCGGCTGCCCGACGATCGACGCACGGGCCATTTCCACCGGGGTGAT  >  NC_002947/156339‑156633

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.