New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 949735	54 (1.050)	3 (0.060)	3/242	NT	5.7%	intergenic (+70/‑490)	dsbB/cyoA	disulfide bond formation protein B/cytochrome bo terminal oxidase subunit II
	?	NC_002947	= 949778	49 (1.020)					intergenic (+113/‑447)	dsbB/cyoA	disulfide bond formation protein B/cytochrome bo terminal oxidase subunit II

TGGGCACTTGTGGCGTTCGTGCTGACCGCCGTCCTGGTCCCGCTCGGTATCTACCGCAATCGACGCCAGGCTTAGA‑CAAAAGTCCCGAATTGCATGGGGTCTTTTGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTATCAAGCGGGGTGCGACAAACTGTCGCGAAGTTGAATTATCGAGCAGTATTGTTGCGGATTCTGTAAAAGACTGTTGCTCAATAAGTCATAGTCAAGGGTTGGCG  >  NC_002947/949591‑949883                                                                                                                                                  |                                                                                                                                                     tGGGCACTTGTGGCGTTCGTGCTGACCGCCGTCCTGGTCCCGCTCGGTATCTACCGCAATCGACGCCAGGCTTAGA‑CAAAAGTCCCGAATTGCATGGGGTCTTTTGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATc                                                                                                                                                     >  4:24147/1‑146 (MQ=255)  gggCAGTTGTGGCGTTCGTGCTGACCGTCGTCGTGGTGCAGCTCTGTATCTACGTCAATCGACGCCAGGCTTAGA‑CAAAAGTCCCGAATTGCATGTTGTCTTTTGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAg                                                                                                                                                  <  4:256086/148‑1 (MQ=255)   ggCACTTGTGGCGTTCGTGCTGACCGCCGTCCTGGTCCCGCTCGGTATCTACCGCAATCGACGCCAGGCTTAGA‑CAAAAGTCCCGAATTGCATGGGGTCTTTTGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATc                                                                                                                                                     >  8:31777/1‑144 (MQ=255)    gCACTTGTGGCGTTCGTGCTGACCGCCGTCCTGGTCCCGCTCGGTATCTACCGCAATCGACGCCAGGCTTAGA‑CAAAAGTCCCGAATTGCATGGGGTCTTTTGCACAGCATGAGAAGAGGGAAAAGTTGCTCACCGCTTGATCCAGAt                                                                                                                                                >  7:68679/1‑148 (MQ=255)             gCGTTCGTGCTGACCGCCGTCCTGGTCCCGCTCGGTATCTACCGCAATCGACGCCAGGCTTAGA‑CAAAAGTCCCGAATTGCATGGGGTCTTTTGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAg                                                                                                                                      >  4:300358/1‑149 (MQ=255)             gCGTTCGTGCTGACCGCCGTCCTGGTCCCGCTCGGTATCTACCGCAATCGACGCCAGGCTTAGA‑CAAAAGTCCCGAATTGCATGGGGTCTTTTGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCAAGATCAATCCGCAg                                                                                                                                      >  1:276842/1‑149 (MQ=255)                      cTGACCGCCGTCCTGGTCCCGCTCGGTATCTACCGCAATCGACGCCAGGCTTAGA‑CAAAAGTCCCGAATTTCATGGGGTCTTTTGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCa                                                                                                                              <  5:89924/148‑1 (MQ=255)                        gACCGCCGTCCTGGTCCCGCTCGGTATCTACCGCAATCGACGCCAGGCTTAGA‑CAAAAGTCACGAATTGCATTGGGTCTTTTGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAGATAAATCCGCAGGCCTGGAAGGa                                                                                                                           >  2:252647/1‑149 (MQ=255)                           cgccgTCCTGGTCCCGCTCGGTATCTACCGCAATCGACGCCAGGCTTAGATCAAAAGTCCCGAATTGCATGGGGTCTTTTGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATg                                                                                                                         >  1:82836/1‑149 (MQ=255)                           cgccgTCCTGGTCCCGCTCGGTATCTACCGCAATCGACGCCAGGCTTAGA‑CAAAAGTCCCGAATTGCATGGGGTCTTTTGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGc                                                                                                                        >  2:111000/1‑149 (MQ=255)                                        ccGCTCGGTATCTACCGCAATCGACGCCAGGCTTAGA‑CAAAAGTCCCGAATTGCATGGGGTCTTTTGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGcc                                                                                                            >  7:149708/1‑148 (MQ=255)                                        ccGCTCGGTATCTACCGCAATCGACGCCAGGCTTAGA‑CAAAAGTCCCGAATTGCATGGGGTCTTTTGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGcc                                                                                                            >  2:167402/1‑148 (MQ=255)                                         cGCTCGGTATCTACCGCAATCGACGCCAGGCTTAGA‑CAAAAGTCCCGAATTGCATGGGGTCTTTTGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATaggcctcaaagccgcatcctgcaaggcctgcggattgatctgga                                                                                                          >  8:258699‑M1/1‑105 (MQ=255)                                          gCTCGGTATCTACCGCAATCGACGCCAGGCTTAGA‑CAAAAGTCCCGAATTGCATGGGGTCTTTTGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTat                                                                                                         >  3:300358‑M2/1‑147 (MQ=255)                                          gCTCGGTATCTACCGCAATCGACGCCAGGCTTAGA‑CAAAAGTCCCGAATTGCATGGGGTCTTTTGCACCACATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATaggcctcaaagccgcatcctgcaaggcctgcggattgatctggat                                                                                                         <  5:118930‑M1/149‑46 (MQ=255)                                           ctgggTATCTACCGCAATCTACGCCATGCTTATA‑CAAAAGTCCCTAATTGCATGGGGTCTTTTGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGTATGCGGCTTTGAGGCCTATc                                                                                                        <  8:68679/146‑1 (MQ=255)                                                 aTCTACCGCAATCGACGCCAGGCTTAGA‑CAAAAGTCCCGAATTGCATGGGGTCTTTTGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTatcaa                                                                                                      <  2:295017‑M2/145‑6 (MQ=255)                                                 aTCTACCGCAATCGACGCCAGGCTTAGA‑CAAAAGTCCCGAATTGCATGGGGTCTTTTGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTatcaa                                                                                                      >  1:295017‑M2/1‑140 (MQ=255)                                                  tCTACCGCAATCGACGCCAGGCTTAGA‑CAAAAGTCCCGAATTGCATGGGGTCTTTTGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTatcaagcgg                                                                                                  >  7:116373‑M2/1‑139 (MQ=255)                                                     aCCGCAATCGACGCCAGGCTTAGA‑CAAAAGTCCCGAATTGCATGGGGTCTTTTGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTatc                                                                                                        <  6:247300‑M2/139‑4 (MQ=255)                                                     aCCGCAATCGACGCCAGGCTTAGA‑CAAAAGTCCCGAATTGCATGGGGTCTTTTGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTatc                                                                                                        >  5:247300‑M2/1‑136 (MQ=255)                                                      ccGCAATCGACGCCAGGCTTAGA‑CAAAAGTCCCGAATTGCATGGGGTCTTTTGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATaggcctcaaagccgcatcctgcaaggcctgcggattgatctggatcaagcggt                                                                                                 <  7:258699‑M1/145‑54 (MQ=255)                                                      ccGCAATCGACGCCAGGCTTAGA‑CAAAAGTCCCGAATTGCATGGGGTCTTTTGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTATCAAGCGGGGTGc                                                                                             >  2:262895/1‑149 (MQ=255)                                                       cGCAATCGACGCCAGGCTTAGA‑CAAAAGTCCCGAATTGCATGGGGTCTTTTGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTATCAAGCGGGGTGc                                                                                             >  3:321315/1‑148 (MQ=255)                                                        gCAATCGACGCCAGGCTTAGA‑CAAAAGTCCCGAATTGCATGGGGTCTTTTGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTATCAAGCGGGGTGCGa                                                                                           >  3:17984/1‑149 (MQ=255)                                                           aTCGACGCCAGGCTTAGA‑CAAAAGTCCCGAATTGCATGGGGTCTTTTGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTATCAAGCGGGGTGCGACa                                                                                         >  6:266566/1‑148 (MQ=255)                                                            tCGACGCCAGGCTTAGA‑CAAAAGTCCCGAATTGCATGGGGTCTTTTGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGcc                                                                                                            <  2:48425/128‑1 (MQ=255)                                                            tCGACGCCAGGCTTAGA‑CAAAAGTCCCGAATTGCATGGGGTCTTTTGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGcc                                                                                                            >  1:48425/1‑128 (MQ=255)                                                             cGACGCCAGGCTTAGA‑CAAAAGTCCCGAATTGCATGGGGTCTTTTGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGGTTTGAGGCCTATCAAGCGGGGTGCGACaaaa                                                                                      >  3:192814/1‑148 (MQ=255)                                                              gACGCCAGGCTTAGA‑CAAAAGTCCCGAATTGCATGGGGTCTTTTGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTATCAAGCGGGGTGCGACAAACt                                                                                     >  4:145422/1‑149 (MQ=255)                                                               aCGCCAGGCTTAGA‑CAAAAGTCCCGAATTGCATGGGGTCTTTTGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTATCAAGCGGGGTGCGACAAACTg                                                                                    >  1:186481/1‑149 (MQ=255)                                                                 gCCAGGCTTAGA‑CAAAAGTCCCGAATTGCATGGGGTCTTTTGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTATCAAGCGGGGTGCGACAAACTGTc                                                                                  <  1:167402/149‑1 (MQ=255)                                                                   cAGGCTTAGA‑CAAAAGTCCCGAATTGCATGGGGTCTTTTGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAGAt                                                                                                                                                >  6:244593/1‑85 (MQ=255)                                                                   cAGGCTTAGA‑CAAAAGTCCCGAATTGCATGGGGTCTTTTGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAGAt                                                                                                                                                <  5:244593/85‑1 (MQ=255)                                                                   cAGGCTTAGA‑CAAAAGTCCCGAATTGCATGGGGTCTTTTGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTATCAAGCGGGGTGCGACAAACTGTcgc                                                                                >  8:201295/1‑149 (MQ=255)                                                                               aaaaGTCCCGAATTGCATGGGGTCTTTTGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTATCAAGCGGGGTGCGACAAACTGTCGCGAAGTTGAAt                                                                      >  6:133799/1‑148 (MQ=255)                                                                                  aGTCCCGAATTGCATGGGGTCTTTTGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTATCAAGCGGGGTGCGACAAACTGTCGCGAAGTTGAATTATc                                                                  <  3:24147/149‑1 (MQ=255)                                                                                  aGTCCCGAATTGCATGGGGTCTTTTGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTATCAAGCGGGGTGCGACAAACTGTCGCGAAGTTGAATTATc                                                                  <  2:186481/149‑1 (MQ=255)                                                                                    tCCCGAATTGCATGGGGTCTTTTGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTATCAAGCGGGGTGCGACAAACTGTCGCGAAGTTGAATTATCGa                                                                <  2:82836/149‑1 (MQ=255)                                                                                      ccGAATTGCATGGGGTCTTTTGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTATCAAGCGGGGTGCGACAAACTGTCGCGAAGTTGAATTATCGAg                                                               >  5:175772/1‑148 (MQ=255)                                                                                      ccGAATTGCATGGGGTCTTTTGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTATCAAGCGGGGTGCGACAAACTGTCGCGAAGTTGAATTATCGAg                                                               <  4:17984/148‑1 (MQ=255)                                                                                       cGAATTGCATGGGGTCTTTTGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTATCAAGCGGGGTGCGACAAACTGTCGCGAAGTTGAATTATCGAGCa                                                             <  8:149708/149‑1 (MQ=255)                                                                                                 ggggTCTTTTGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTATCAAGCGGGGTGCGACAAACTGTCGCGAAGTTGAATTATCGAGCAGTATTGTTGc                                                   >  4:259780/1‑149 (MQ=255)                                                                                                  gggTCTTTTGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTATCAAGCGGGGTGCGACAAACTGTCGCGAAGTTGAATTATc                                                                  <  1:326007/133‑1 (MQ=255)                                                                                                  gggTCTTTTGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTATCAAGCGGGGTGCGACAAACTGTCGCGAAGTTGAATTATc                                                                  >  2:326007/1‑133 (MQ=255)                                                                                                    gTCTTTTGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTATCAAGCGGGGTGCGACAAACTGTCGCGAAGTTGAATTATCGAGCAGTATTGTTGCGGa                                                <  5:133799/149‑1 (MQ=255)                                                                                                        tttGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTATCAAGCGGGGTGCGACAAACTGTCGCGAAGTTGAATTATCGAGCAGTATTGTTGCGGATTCt                                            >  8:144273/1‑149 (MQ=255)                                                                                                         ttGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGGGGCTTTGAGGCCTATCAAGCGGGGTGCGACAAACTGTCGCGAAGTTGAATTATCGAGCAGTATTGTTGCGGATTCt                                            <  1:262895/148‑1 (MQ=255)                                                                                                          tGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTATCAAGCGGGGTGCGACAAACTGTCGCGAAGTTGAATTATCGAGCAGTATTGTTGCGGATTCTg                                           <  3:145422/148‑1 (MQ=255)                                                                                                           gCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTATCAAGCGGGGTGCGACAAACTGTCGCGAAGTTGAATTATCGAGCAGTATTGTTGCGGATTCTGt                                          >  3:253847/1‑148 (MQ=255)                                                                                                            cACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTATCAAGCGGGGTGCGACAAACTGTCGCGAAGTTGAATTATCGAGCAGTATTGTTGCGGATTCTGTaa                                        <  5:259679/149‑1 (MQ=255)                                                                                                            cACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTATCAAGCGGGGTGCGACAAACTGTCGCGAAGTTGAATTATCGAGCAGTATTGTTGCGGATTCTGTa                                         >  6:216445/1‑148 (MQ=255)                                                                                                             aCCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTATCAAGCGGGGTGCGACAAACTGTCGCGAAGTTGAATTATCGAGCAGTATTGTTGCGGATTCTGTaa                                        >  8:223328/1‑148 (MQ=255)                                                                                                              ccGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTATCAAGCGGGGTGCGACAAACTGTCGCGAAGTTGAATTATCGAGCAGTATTGTTGCGGATTCTGTaaaa                                      <  7:223328/149‑1 (MQ=255)                                                                                                                     agaagaGGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTATCAAGCGGGGTGCGACAAACTGTCGCGAAGTTGAATTATCGAGCAGTATTGTTGCGGATTCTGTAAAAGACTGt                                <  5:216445/148‑1 (MQ=255)                                                                                                                      gaagaGGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTATCAAGCGGGGTGCGACAAACTGTCGCGAAGTTGAATTATCGAGCAGTATTGTTGCGGATTCTGTAAAAGACTGGTg                              <  6:274390/149‑1 (MQ=255)                                                                                                                        agagGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTATCAAGCGGGGTGCGACAAACTGTCGCGAAGTTGAATTATCGAGCAGTATTGTTGCGGATTCTGTAAAAGACTGTTGCt                            <  7:201295/149‑1 (MQ=255)                                                                                                                         gagGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTATCAAGCGGGGTGCGACAAACTGTCGCGAAGTTGAATTATc                                                                  <  8:155609/110‑1 (MQ=255)                                                                                                                         gagGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTATCAAGCGGGGTGCGACAAACTGTCGCGAAGTTGAATTATc                                                                  >  7:155609/1‑110 (MQ=255)                                                                                                                            ggAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTATCAAGCGGGGTGCGACAAACTGTCGCGAAGTTGAATTATCGAGCAGTATTGTTGCGGATTCTGTAAAAGACTGTTGCTCaa                         >  3:322253/1‑148 (MQ=255)                                                                                                                            ggAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTATCAAGCGGGGTGCGACAAACTGTCGCGAAGTTGAATTATCGAGCAGTATTGTTGCGGATTCTGTAAAAGACTGTTGCTCaa                         >  1:23456/1‑148 (MQ=255)                                                                                                                            ggAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTATCAAGCGGGGTGCGACAAACTGTCGCGAAGTTGAATTATCGAGCAGTATTGTTGCGGATTCTGTAAAAGACTGTTGCTCAAt                        <  7:144273/149‑1 (MQ=255)                                                                                                                              aaaaGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTATCAAGCGGGGTGCGACAAACTGTCGCGAAGTTGAATTATCGAGCAGTATTGTTGCGGATTCTGTAAAAGACTGTTGCTCAATaa                      <  4:253847/149‑1 (MQ=255)                                                                                                                                aaGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTATCAAGCGGGGTGCGACAAACTGTCGCGAAGTTGAATTATCGAGCAGTATTGTTGCGGATTCTGTAAAAGACTGTTGCTCAATAAGt                    <  7:31777/149‑1 (MQ=255)                                                                                                                                         aCCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTatcaagcggtgcgcaacttttccctcttctcatgcggtgcaaaagaccccatgcaattcgggacttttgtctaagcctggcgtcgattgcgg               <  7:258699‑M2/145‑93 (MQ=255)                                                                                                                                         aCCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTATCAAGCGGGGTGCGACAAACTGTCGCGAAGTTGAATTATCGAGCAGTATTGTTGCGGATTCTGTAAAAGACTGTTGCTCAATAAGTCATAGTc             >  7:111186/1‑147 (MQ=255)                                                                                                                                          ccGCTTGATaggcctcaaagccgcatcctgcaaggcctgcggattgatctggatcaagcggtgcgcaacttttccctcttctcatgcggtgcaaaagaccccatgcaattcgggacttttgtctaagcctggcgtcgattgcggtaga           >  7:116373‑M1/1‑9 (MQ=255)                                                                                                                                          ccGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGG‑TTTGAGGCCTATCAAGCGGGGTGCGACAAACTGTCGCGAAGTTGAATTATCGAGCAGTATTGTTCAGGATTCTGTAAAAGACTGTTGCTCAATATGTCAAAGTCAAgg         >  4:70028/1‑149 (MQ=255)                                                                                                                                              ttGATaggcctcaaagccgcatcctgcaaggcctgcggattgatctggatcaagcggtgcgcaacttttccctcttctcatgcggtgcaaaagaccccatgcaattcgggacttttgtctaagcctggcgtcgattgcggtagat          >  1:295017‑M1/1‑5 (MQ=255)                                                                                                                                              ttGATaggcctcaaagccgcatcctgcaaggcctgcggattgatctggatcaagcggtgcgcaacttttccctcttctcatgcggtgcaaaagaccccatgcaattcgggacttttgtctaagcctggcgtcgattgcggtagat          <  2:295017‑M1/145‑141 (MQ=255)                                                                                                                                                gATaggcctcaaagccgcatcctgcaaggcctgcggattgatctggatcaagcggtgcgcaacttttccctcttctcatgcggtgcaaaagaccccatgcaattcgggacttttgtctaagcctggcgtcgattgcggt              <  6:247300‑M1/139‑137 (MQ=255)                                                                                                                                                gATaggcctcaaagccgcatcctgcaaggcctgcggattgatctggatcaagcggtgcgcaacttttccctcttctcatgcggtgcaaaagaccccatgcaattcgggacttttgtctaagcctggcgtcgattgcggt              >  5:247300‑M1/1‑3 (MQ=255)                                                                                                                                                 aTaggcctcaaagccgcatcctgcaaggcctgcggattgatctggatcaagcggtgcgcaacttttccctcttctcatgcggtgcaaaagaccccatgcaattcgggacttttgtctaagcctggcgtcgattgcggtagataccgagc   >  3:300358‑M1/1‑2 (MQ=255)                                                                                                                                                 aTCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTatcaagcggtgcgcaacttttccctcttctcatgtggtgcaaaagaccccatgcaattcgggacttttgtctaagcctggcgtcgattgcggtagataccgagc   <  5:118930‑M2/149‑105 (MQ=255)                                                                                                                                                 aTCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTATCAAGCGGGGTGCGACAAACTGTCGCGAAGTTGAATTATCGAGCAGTATTGTTGCGGATTCTGTAAAAGACTGTTGCTCAATAAGTCATAGTCAAGGGTTGGc   <  2:23456/149‑1 (MQ=255)                                                                                                                                                  tCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTatcaagcggtgcgcaacttttccctcttctcatgcggtgcaaaagaccccatgcaattcgggacttttgtctaagcctggcgtcgattgcggtagataccgagcg  >  8:258699‑M2/1‑44 (MQ=255)                                                                                                                                                  |                                                                                                                                                     TGGGCACTTGTGGCGTTCGTGCTGACCGCCGTCCTGGTCCCGCTCGGTATCTACCGCAATCGACGCCAGGCTTAGA‑CAAAAGTCCCGAATTGCATGGGGTCTTTTGCACCGCATGAGAAGAGGGAAAAGTTGCGCACCGCTTGATCCAGATCAATCCGCAGGCCTTGCAGGATGCGGCTTTGAGGCCTATCAAGCGGGGTGCGACAAACTGTCGCGAAGTTGAATTATCGAGCAGTATTGTTGCGGATTCTGTAAAAGACTGTTGCTCAATAAGTCATAGTCAAGGGTTGGCG  >  NC_002947/949591‑949883

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.