New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1602950 =	39 (0.760)	4 (0.080)	4/240	NT	9.8%	coding (797/1215 nt)	PP_5469	SAM‑dependent methyltransferase
	?	NC_002947	1603031 =	38 (0.800)					coding (878/1215 nt)	PP_5469	SAM‑dependent methyltransferase

TTTGGGCCGCGACGCACAGGTCACCGGCGTGGAGCTGCGCCAGGACATGGTCGACCTGTGCAACGCCGCGGCCGCACGCCTCGACCACCCAGGCCTGGAGTTCCAGTGTGGTGATGTGCGCAGCGTGGTGCCTGAGGCCATCGAGGTGATGATCGCCTTGCATGCCTGTGACATCGCCACCGACTACGCCATCCACACTGGCATCCGCTGCAACGCCGCGATCATCATGTGCTCGCCGTGCTGCCACAAGCAGATCCGCCCGCAACTGCACAGCCCGGGGT  >  NC_002947/1602804‑1603084                                                                                                                                                   |                                                                                                                                       acaggcttccaggtacagcgcacgcaggctgtcggtcagcatttcggcctgctggcccaggtgcaggccgtactgcagcatgggttgcagcaaccccgggctgtgcagttgcgggcggatctgcttgtggcagcacggcgagcacatga                                                                                                                                      <  1:136730‑M1/3‑1 (MQ=255) acaggcttccaggtacagcgcacgcaggctgtcggtcagcatttcggcctgctggcccaggtgcaggccgtactgcagcatgggttgcagcaaccccgggctgtgcagttgcgggcggatctgcttgtggcagcacggcgagcacatga                                                                                                                                      <  5:44334‑M1/3‑1 (MQ=255)      gCCGCGACGCACAGGTCACCGGCGTGGAGCTGCGCCAGGACATGGTCGACCTGTGCAACGCCGCGGCCGCACGCCTCGACCACCCAGGCCTGGAGTTCCAGTGTGGTGATGTGCGCAGCGTGGTGCCTGAGGCCATCGAGGTGATGATc                                                                                                                                 <  5:265895/149‑1 (MQ=255)      gCCGCGACGCACAGGTCACCGGCGTGGAGCTGCGCCAGGACATGGTCGACCTGTGCAACGCCGCGGCCGCACGCCTCGACCACCCAGGCCTGGAGTTCCAGTGTGGTGATGTGCGCAGCGTGGTGCCTGAGGCCATCGAGGTGATGATc                                                                                                                                 <  4:225687/149‑1 (MQ=255)       ccGCGACACACAGGTCACCGGCGTGGAGCTGCGCCAGGACATGGTCGACCTGTGCAACGCCGCGGCCGCACGCCTCGACCACCCAGGCCTGGAGTTCCAGTGTGGTGATGTGCGCAGCGTGGTGCCTGAGGCCATCGAGGTGATGATCg                                                                                                                                >  8:282182/1‑149 (MQ=255)         ccaggtacagcgcacgcaggctgtcggtcagcatttcggcctgctggcccaggtgcaggccgtactgcagcatgggttgcagcaaccccgggctgtgcagttgcgggcggatctgcttgtggcagcacggcgagcacaTGATGATCGc                                                                                                                               >  6:234742‑M1/139‑148 (MQ=255)            acacacaGGTCACCGGCGTGGAGCTGCGCCAGGACATGGTCGACCTGTGCAACGCCGCGGCCGCACGCCTCGACCACCCAGGCCTGGAGTTCCAGTGTGGTGATGTGCGCAGCGTGGTGCCTGAGGCCATCGAGGTGATGATCGCCTTg                                                                                                                           <  7:282182/146‑1 (MQ=255)                acaGGTCACCGGCGTGGAGCTGCGCCAGGACATGGTCGACCTGTGCAACGCCGCGGCCGCACGCCTCGACCACCCAGGCCTGGAGTTCCAGTGTGGTGATGTGCGCAGCGTGGTGCCTGAGGCCATCGAGGTGATGATCGCCTTGCATg                                                                                                                       >  3:235735/1‑149 (MQ=255)                  gcgcacgcaggctgtcggtcagcatttcggcctgctggcccaggtgcaggccgtactgcagcatgggttgcagcaaccccgggctgtgcagttgcgggcggatctgcttgtggcagcacggcgagcacaTGATGATCGCCTTGCATGcc                                                                                                                     <  5:41451‑M1/20‑1 (MQ=255)                  aGGTCACCGGCGTGGAGCTGCGCCAGGACATGGTCGACCTGTGCAACGCCGCGGCCGCACGCCTCGACCACCCAGGCCTGGAGTTCCAGTGTGGTGATGTGCGCAGCGTGGTGCCTGAGGCCATCGAGGTGATGATCGCCTTGCATGcc                                                                                                                     >  6:28560/1‑149 (MQ=255)                     gcACCGGCGTGGAGCTGCGCCAGGACATGGTCGACCTGTGCAACGCCGCGGCCGCACGCCTCGACCACCCAGGCCTGGAGTTCCAGTGTGGTGATGTGCGCAGCGTGGTGCCTGAGGCCATCGAGGTGATGATCGCCTTGCATGCCtgt                                                                                                                  <  4:29315/148‑1 (MQ=255)                       aCCGGCGTGGAGCTGCGCCAGGACATGGTCGACCTGTGCAACGCCGCGGCCGCACGCCTCGACCACCCAGGCCTGGAGTTCCAGTGTGGTGATGTGCGCAGCGTGGTGCCTGAGGCCATCGAGGTGATGATCGCCTTGCATGCCTGTGa                                                                                                                >  3:292436/1‑149 (MQ=255)                                caGCTGCGCCAGGACATGGTCGACCTGTGCAACGCCGCGGCCGCACGCCTCGACCACACAGGCCTGGAGTTCCAGTGTGGTGATGAGCGCAGCGTGGTGCAGGAGGCCATCGAGGTGATGCTCGCCTAGCATCCCTGTGACATCGCCAc                                                                                                       >  8:113369/2‑149 (MQ=255)                                             cggcctgctggcccaggtgcaggccgtactgcagcatgggttgcagcaaccccgggctgtgcagttgcgggcggatctgcttgtggcagcacggcgagcacatgatg                                                                                                                                    >  2:200399‑M1/103‑107 (MQ=255)                                             cggcctgctggcccaggtgcaggccgtactgcagcatgggttgcagcaaccccgggctgtgcagttgcgggcggatctgcttgtggcagcacggcgagcacatgatg                                                                                                                                    <  1:200399‑M1/5‑1 (MQ=255)                                                      aCCTGTGCAACGCCGCGGCCGCACGCCTCGACCACCCAGGCCTGGAGTTCCAGTGTGGTGATGTGCGCAGCGTGGTGCCTGAGGCCATCGAGGTGATGATCGCCTTGCATGCCTGTGACATCGCCACCGACTACGCCATCCACACTgg                                                                                  >  1:52988/1‑148 (MQ=255)                                                         ccaggtgcaggccgtactgcagcatgggttgcagcaaccccgggctgtgcagttgcgggcggatctgcttgtggcagcacggcgagcacaTGATGATCGCCTTGCATGCCTGTGACATCGCCACCGACTACGCCATCCACACTGGCATc                                                                              <  6:26246‑M1/59‑1 (MQ=255)                                                              aaCGCCGCGGCCGCACGCCTCGACCACCCAGGCCTGGAGTTCCAGTGTGGTGATGTGCGCAGCGTGGTGCCTGAGGCCATCGAGGTGATGATCGCCTTGCATGCCTGTGACATCGCCACCGACTACGCCATCcaca                                                                                      >  3:149027/1‑136 (MQ=255)                                                              aaCGCCGCGGCCGCACGCCTCGACCACCCAGGCCTGGAGTTCCAGTGTGGTGATGTGCGCAGCGTGGTGCCTGAGGCCATCGAGGTGATGATCGCCTTGCATGCCTGTGACATCGCCACCGACTACGCCATCcaca                                                                                      >  5:110590/1‑136 (MQ=255)                                                              aaCGCCGCGGCCGCACGCCTCGACCACCCAGGCCTGGAGTTCCAGTGTGGTGATGTGCGCAGCGTGGTGCCTGAGGCCATCGAGGTGATGATCGCCTTGCATGCCTGTGACATCGCCACCGACTACGCCATCcaca                                                                                      <  4:149027/136‑1 (MQ=255)                                                              aaCGCCGCGGCCGCACGCCTCGACCACCCAGGCCTGGAGTTCCAGTGTGGTGATGTGCGCAGCGTGGTGCCTGAGGCCATCGAGGTGATGATCGCCTTGCATGCCTGTGACATCGCCACCGACTACGCCATCcaca                                                                                      <  6:110590/136‑1 (MQ=255)                                                                 gccgcGGCCGCACGCCTCGACCACCCAGGCCTGGAGTTCCAGTGTGGTGATGTGCGCAGCGTGGTGCCTGAGGCCATCGAGGTGATGATCGCCTTGCATGCCTGTGACATCGCCACCGACTACGCCATCCACACTGGCATCCGCTGCaa                                                                      >  8:124947/1‑149 (MQ=255)                                                                  ccgcGGCCGCACGCCTCGACCACCCAGGCCACCAGTTCCAGTGAGCTGATGTGCGCAGCGTGGTTCCTGAGGCCATCGAGGAGATGATCCCCAAGCATGCCAGTCACATCGCCACCGACTACGCCATCCACACTGGCAACCGCTGCAAc                                                                     >  8:91040/1‑149 (MQ=255)                                                                   cgcgGCCGCACGCCTCGACCACCCAGGCCTGGAGTTCCAGTGTGGTGATGTGCGCAGCGTGGTGCCTGAGGCCATCGAGGTGATGATCGCCTTGCATGCCTGTGACATCGCCACCGACTACGCCATCCACACTGGCATCCGCt                                                                          <  5:153859/143‑1 (MQ=255)                                                                   cgcgGCCGCACGCCTCGACCACCCAGGCCTGGAGTTCCAGTGTGGTGATGTGCGCAGCGTGGTGCCTGAGGCCATCGAGGTGATGATCGCCTTGCATGCCTGTGACATCGCCACCGACTACGCCATCCACACTGGCATCCGCt                                                                          >  6:153859/1‑143 (MQ=255)                                                                         ctgcagcatgggttgcagcaaccccgggctgtgcagttgcgggcggatctgcttgtggcagcacggcgagcacaTGATGATCGCCTTGCATGCCTGTGACATCGCCACCGACTACGCCATCCACACTGGCATCCGCTGCAACGCCGCGa                                                              >  5:26246‑M1/75‑149 (MQ=255)                                                                          gCACGCCTCGACCACCCAGGCCTGGAGTTCCAGTGTGGTGATGTGCGCAGCGTGGTGCCTGAGGCCATCGAGGTGATGATCGCCTTGCATGCCTGTGACATCGCCACCGACTACGCCATCCACACTg                                                                                   <  1:316848/127‑1 (MQ=255)                                                                          gCACGCCTCGACCACCCAGGCCTGGAGTTCCAGTGTGGTGATGTGCGCAGCGTGGTGCCTGAGGCCATCGAGGTGATGATCGCCTTGCATGCCTGTGACATCGCCACCGACTACGCCATCCACACTg                                                                                   >  2:316848/1‑127 (MQ=255)                                                                              gcatgggttgcagcaaccccgggctgtgcagttgcgggcggatctgcttgtggcagcacggcgagcacaTGATGATCGCCTTGCATGCCTGTGACATCGCCACCGACTACGCCATCCACACTGGCATCCGCTGCAACGCCGCGatcatc                                                         >  6:41451‑M1/70‑149 (MQ=255)                                                                                         ccAGGCCTGGAGTTCCAGTGTGGTGATGTGCGCAGCGTGGTGCCTGAGGCCATCGAGGTGATGATCGCCTTGCATGCCTGTGACATCGCCACCGACTACGCCATCCACACTGGCATCCGCTGc                                                                        >  1:222068/1‑123 (MQ=255)                                                                                         ccAGGCCTGGAGTTCCAGTGTGGTGATGTGCGCAGCGTGGTGCCTGAGGCCATCGAGGTGATGATCGCCTTGCATGCCTGTGACATCGCCACCGACTACGCCATCCACACTGGCATCCGCTGc                                                                        <  2:222068/123‑1 (MQ=255)                                                                                         ccAGGCCTGGAGTTCCAGTGTGGTGATGTGCGCAGCGTGGTGCCTGAGGCCATCGAGGTGATGATCGCCTTGCATGCCTGTGACATCGCCACCGACTACGCCATCCACACTGGCATCCGCTGCAACGCCGCGATCATCATGTGCTCGcc                                              >  5:291217/1‑149 (MQ=255)                                                                                            ggCCTTGAGTTCCAGTGTGGTGATGTGCGCAGCGTGGTGCCTGAGGCCATCGAGGGGATGATCGCCTTGCATGCCTGGGACATCGCGACCGACTACGCCATGCACACTGGCATCCGCTGCAACGCCGCGATCATCATGTGCTCGCCGtg                                           <  7:113369/149‑1 (MQ=255)                                                                                               cTGGAGTTCCAGTGTGGTGATGTGCGCAGCGTGGTGCCTGAGGCCATCGAGGTGATGATCGCCTTGCATGCCTGTGACATCGCCACCGACTACGCCATCCACACTGGCATCCGCTGCAACGCCGCGATCATCATGTGCTCGCCGtgctg                                        >  1:178735/1‑149 (MQ=255)                                                                                                  gAGTTCCAGTGTGGTGATGTGCGCAGCGTGGTGCCTGAGGCCATCGAGGTGATGATCGCCTTGCATGCCTGTGACATCGCCACCGACTACGCCATCCACACTGGCATCCGCTGCAACGCCGCGATCATCATGTGCTCGCCGtgctgc                                       <  5:39530/147‑1 (MQ=255)                                                                                                        cAGTGTGGTGATGTGCGCAGCGTGGTGCCTGAGGCCATCGAGGTGATGATCGCCTTGCATGCCTGTGACATCGCCACCGACTACGCCATCCACACTGGCATCCGCTGCAACGCCGCGATCATCATGTGCTCGCCGTGCTGCCACAAGc                                <  4:292436/148‑1 (MQ=255)                                                                                                        cAGTGTGGTGATGTGCGCAGCGTGGTGCCTGAGGCCATCGAGGTGATGATCGCCTTGCATGCCTGTGACATCGCCACCGACTACGCCATCCACACTGGCATCCGCTGCAACGCCGCGATCATCATGTGCTCGCCGTGCTGCCACAAGCa                               <  7:124947/149‑1 (MQ=255)                                                                                                        cAGTGTGGTGATGTGCGCAGCGTGGTGCCTGAGGCCATCGAGGTGATGATCGCCTTGCATGCCTGTGACATCGCCACCGACTACGCCATCCACACTGGCATCCGCTGCAACGCCGCGAGCATCATGTGCTCGCCGTGCTGCCACAAg                                 >  6:24798/1‑147 (MQ=255)                                                                                                          gtgtGGTGATGTGCGCAGCGTGGTGCCTGAGGCCATCGAGGTGATGATCGCCTTGCATGCCTGTGACATCGCCACCGACTACGCCATCCACACTGGCATCCGCTGCAACGCCGCGATCATCATGTGCTCGCCGTGCTGCCACAAGCAGa                             <  5:28560/149‑1 (MQ=255)                                                                                                                tgATGTGCGCAGCGTGGTGCCTGAGGCCATCGAGGTGATGATCGCCTTGCATGCCTGTGACATCGCCACCGACTACGCCATCCACACTGGCATCCGCTGCAACGCCGCGATCATCATGTGCTCGCCGtgctgc                                       >  2:285718/1‑133 (MQ=255)                                                                                                                tgATGTGCGCAGCGTGGTGCCTGAGGCCATCGAGGTGATGATCGCCTTGCATGCCTGTGACATCGCCACCGACTACGCCATCCACACTGGCATCCGCTGCAACGCCGCGATCATCATGTGCTCGCCGtgctgc                                       <  1:285718/133‑1 (MQ=255)                                                                                                                  aTGTGCGCAGCGTGGTGCCTGAGGCCATCGAGGTGATGATCGCCTTGCATGCCTGTGACATCGCCACCGACTACGCCATCCACACTGGCATCCGCTGCAACGCCGCGATCATCATGTGCTCGCCGTGCTGCCACAAGCAGATccgcccg                     >  1:324476/1‑149 (MQ=255)                                                                                                                  aTGTGCGCAGCGTGGTGCCTGAGGCCATCGAGGTGATGATCGCCTTGCATGCCTGTGACATCGCCACCGACTACGCCATCCACACTGGCATCCGCTGCAACGCCGCGATCATCATGTGCTCGCCGTGCTGCCACAAGCAGATccgccc                      <  6:291217/148‑1 (MQ=255)                                                                                                                        gcAGCGTGGTGCCTGAGGCCATCGAGGTGATGATCGCCTTGCATGCCTGTGACATCGCCACCGACTACGCCATCCACACTGGCATCCGCTGCAACGCCGCGATCATCATGTGCTCGCCGTGCTGCCACAAGCAGATCCGCCCGCAACTg               >  6:24021/1‑149 (MQ=255)                                                                                                                          aGCGTGGTGCCTGAGGCCATCGATGTGATGCTCGCCTTGGATGCCTGTGACTTCGCCACCGACTACGCCATCCACACTGGCATCCGCTGCAACGCCGCGATCATCATGTGCTCGCCGTGCTGCCACAAGCAGATCCGCCCGCAACTGca             <  7:91040/149‑1 (MQ=255)                                                                                                                             gtggtgCCTGAGGCCATCGAGGTGATGATCGCCTTGCATGCCTGTGACATCGCCACCGACTACGCCTTCCACACTGGCATCCGCTGCAACGCCGCGATCATCATGTGCTCGCCGTGCTGCCACAAGCAGATCCGCCCGCAACTGCACAg          >  5:249639/1‑149 (MQ=255)                                                                                                                                  gCCTGAGGCCATCGAGGTGATGATCGCCTTGCATGCCTGTGACATCGCCACCGACTACGCCATCCACACTGGCATCCGCTGCAACGCCGCGATcatcat                                                       >  2:169992/1‑99 (MQ=255)                                                                                                                                     tGAGGCCATCGAGGTGATGATCGCCTTGCATGCCTGTGACATCGCCACCGACTACGCCATCCACACTGGCATCCGCTGCAACGCCGCGATCATCATGTGCTCGCCGTGCTGCCACAAGCAGATCCGCCCGCAACTGCACAGCCCGGGGt  >  6:44334/1‑149 (MQ=255)                                                                                                                                                   |                                                                                                                                       TTTGGGCCGCGACGCACAGGTCACCGGCGTGGAGCTGCGCCAGGACATGGTCGACCTGTGCAACGCCGCGGCCGCACGCCTCGACCACCCAGGCCTGGAGTTCCAGTGTGGTGATGTGCGCAGCGTGGTGCCTGAGGCCATCGAGGTGATGATCGCCTTGCATGCCTGTGACATCGCCACCGACTACGCCATCCACACTGGCATCCGCTGCAACGCCGCGATCATCATGTGCTCGCCGTGCTGCCACAAGCAGATCCGCCCGCAACTGCACAGCCCGGGGT  >  NC_002947/1602804‑1603084

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.