New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2542061 =	55 (1.060)	3 (0.060)	3/250	NT	5.4%	coding (595/993 nt)	PP_2234	AraC family transcriptional regulator
	?	NC_002947	2542124 =	52 (1.050)					coding (658/993 nt)	PP_2234	AraC family transcriptional regulator

GGGTGCGGGTAGAGGCTCAGCAGCCGTTGCTGGATGACGGCGACATCGTGACCTCGGCAGGGTTGATGGCCTGGACGGACCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACTGGTTGCAGGGCAATGGCGGGCAGGATGCCGACCTGGCCACGATGGCGGCCTGCGCGG  >  NC_002947/2541915‑2542208                                                                                                                                                   |                                                                                                                                                    tcggtcgggcgcagcccggtagcggcacgaaagcgccgcaagaaagtgcgcgcctccagccccgcgcaggccgccatcgtggccaggtcggcatcctgcccgccattgccctgcaaccagtgctgcaccttcaacacggcctcgtcGcc                                                                                                                                                   <  7:184598‑M1/3‑1 (MQ=255) gggTGCGGGTAGAGGCTCAGCAGCCGTTGCTGGATGACGGCGACATCGTGACCTCGGCAGGGTTGATGGCCTGGACGGACCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGcc                                                                                                                                                   <  3:84536/149‑1 (MQ=255)   ggtcgggcgcagcccggtagcggcacgaaagcgccgcaagaaagtgcgcgcctccagccccgcgcaggccgccatcgtggccaggtcggcatcctgcccgccattgccctgcaaccagtgctgcaccttcaacacggcctcgtcGcc                                                                                                                                                   >  4:180117‑M1/145‑147 (MQ=255)               gCTCAGCAGCCGTTGCTGGATGACGGCGACATCGTGACCTCGGCAGGGTTGATGGCCTGGACGGACCTCGGCTTGCGCCTGCAGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCAGGAAGACGATCCGGta                                                                                                                                       >  8:73578/1‑146 (MQ=255)                        ccGTTGCTGGATGACGGCGACATCGTGACCTCGGCAGGGTTGATGGCCTGGACGGACCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCt                                                                                                                            >  7:46165/1‑149 (MQ=255)                          gTTGCTGGATGACGGCGACATCGTGACCTCGGCAGGGTTGATGGCCTGGACGGACCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGc                                                                                                                          >  6:103642/1‑149 (MQ=255)                                  aTGACGGCGACATCGTGACCTCGGCAGGGTTGATGGCCTGGACGGACCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCt                                                                                                                  <  5:110941/149‑1 (MQ=255)                                     aCGGCGACATCGTGACCTCGGCAGGGTTGATGGCCTGGACGGACCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCGCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCtgt                                                                                                                <  1:319029/148‑1 (MQ=255)                                          gACATCGTGACCTCGGCAGGGTTGATGGCCTGGACGGACCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCaa                                                                                                          >  5:247876/1‑149 (MQ=255)                                          gACATCGTGACCTCGGCAGGGTTGATGGCCTGGACGGACCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCaa                                                                                                          <  4:238895/149‑1 (MQ=255)                                           aCATCGTGACCTCGGCAGGGTTGATGGCCTGGACGGACCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAAc                                                                                                         <  4:51922/149‑1 (MQ=255)                                                gTGACCTCGGCAGGGTTGATGGCCTGGACGGGCCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCcgcg                                                                                                    >  5:237676/1‑149 (MQ=255)                                                gTGACCTCGGCAGGGTTGATGGCCTGGACGGACCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCcgc                                                                                                     <  2:65899/148‑1 (MQ=255)                                                gTGACCTCGGCAGGGTTGATGGCCTGGACGGACCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTCTGTTCAACCcgcg                                                                                                    >  3:74092/1‑149 (MQ=255)                                                     cTCGGCAGGGTTGATGGCCTGGACGGACCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTg                                                                                                >  8:305569/1‑148 (MQ=255)                                                     cTCGGCAGGGTTGATGGCCTGGACGGACCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTg                                                                                                >  4:61765/1‑148 (MQ=255)                                                     cTCGGCAGGGTTGATGGCCTGGACGGACCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTg                                                                                                >  3:252202/1‑148 (MQ=255)                                                      ctccagccccgcgcaggccgccatcgtggccaggtcggcatcctgcccgccattgccctgcaaccagtgctgcaccttcaacacggcctcgtcGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGa                                                                                              <  2:22798‑M1/56‑1 (MQ=255)                                                          cAGGGTTGATGGCCTGGACGGTCCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCAc                                                                                          <  6:237676/149‑1 (MQ=255)                                                           aGGGTTGATGGCCTGGACGGACCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTACCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACg                                                                                         >  2:265184/1‑149 (MQ=255)                                                            ccccgcgcaggccgccatcgtggccaggtcggcatcctgcccgccattgccctgcaaccagtgctgcaccttcaacacggcctcgtcGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACgg                                                                                        >  1:22798‑M1/88‑149 (MQ=255)                                                               cgcgcaggccgccatcgtggccaggtcggcatcctgcccgccattgccctgcaaccagtgctgcaccttcaacacggcctcgtcGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGcga                                                                                     >  5:198355‑M1/85‑149 (MQ=255)                                                                 gATGGCCTGGACGGACCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGcgac                                                                                    <  4:74092/148‑1 (MQ=255)                                                                   tGGCCTGGACGGACCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAg                                                                                 <  3:302949/149‑1 (MQ=255)                                                                     gCCGGGACGGACCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCGGCGATCCGCTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAgg                                                                                <  5:228104/148‑1 (MQ=255)                                                                       cTGGACGGACCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGccc                                                                                                                        <  5:166662/106‑1 (MQ=255)                                                                       cTGGACGGACCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGccc                                                                                                                        >  6:166662/1‑106 (MQ=255)                                                                       cTGGACGGACCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCg                                                                             >  6:28697/1‑149 (MQ=255)                                                                          gacggacCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCgtg                                                                           <  4:252202/148‑1 (MQ=255)                                                                                 cTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGt                                                                   >  6:302142/1‑149 (MQ=255)                                                                                 cTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGGGTTGAAGGt                                                                   >  8:242415/1‑149 (MQ=255)                                                                                    ggCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTgc                                                                 <  7:305569/148‑1 (MQ=255)                                                                                     gCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTACCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTgcag                                                               <  1:265184/149‑1 (MQ=255)                                                                                           gcCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACTgg                                                         <  8:46165/149‑1 (MQ=255)                                                                                           gcCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACTgg                                                         <  6:247876/149‑1 (MQ=255)                                                                                            ccTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACTGGt                                                        <  5:103642/149‑1 (MQ=255)                                                                                                   gAGCGCTTTTTGGGGCCGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACTGGTTGCAggg                                                 <  2:206024/149‑1 (MQ=255)                                                                                                   gAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACTGGTTGCAggg                                                 <  7:73578/149‑1 (MQ=255)                                                                                                     tcgcTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCACGGCGCTGTGTCCAACCAGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGTTGCAGACCTGGTTGCAGGGc                                                >  8:59325/2‑148 (MQ=255)                                                                                                     gcgcTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACTGGTTGCAGGGc                                                >  1:261845/1‑148 (MQ=255)                                                                                                        cTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACTGGTTGCAGGGCAATg                                            <  5:28697/149‑1 (MQ=255)                                                                                                         tttttGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGcgacga                                                                                  >  3:127173/1‑110 (MQ=255)                                                                                                         tttttGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGcgacga                                                                                  <  4:127173/110‑1 (MQ=255)                                                                                                         tttttGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACTGGTTGCAggg                                                 <  5:225156/143‑1 (MQ=255)                                                                                                         tttttGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACTGGTTGCAggg                                                 >  6:225156/1‑143 (MQ=255)                                                                                                         tttttGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACTGGTTGCAGGGCAATgg                                           >  3:192789/1‑149 (MQ=255)                                                                                                         tttttGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACGGGTTGCAGGGCAATgg                                           >  4:170256/1‑149 (MQ=255)                                                                                                         tttttGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAAGTGCAGCACTGGTTGCAGGGCAATgg                                           >  1:329983/1‑149 (MQ=255)                                                                                                            ttGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACTGGTTGCAGGGCAATGGCgg                                        >  5:290138/1‑149 (MQ=255)                                                                                                                 gacgacGGTGGCTCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACTGGTTGCAGGGCAATGGCGGGCAg                                    >  2:239066/1‑148 (MQ=255)                                                                                                                  acgacgGTGGCTCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGGTGAAGGTGCAGCACTGGTTGCAGGGCAATGGCGGGCAGGa                                  <  8:235678/149‑1 (MQ=255)                                                                                                                   cgacgGTGGCTCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACTGGTTGCAGGGCAATGGCGGGCAGGAt                                 >  3:223320/1‑149 (MQ=255)                                                                                                                     acgGTGGCTCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACTGGTTGCAGGGCAATGGCGGGCAGGATGc                               <  3:170256/149‑1 (MQ=255)                                                                                                                      cgGTGGCTCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACTGGTTGCAGGGCAATGGCg                                         >  3:91599/1‑138 (MQ=255)                                                                                                                      cgGTGGCTCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACTGGTTGCAGGGCAATGGCg                                         <  4:91599/138‑1 (MQ=255)                                                                                                                       ggTGGCTCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTGAACCCGCGCCTGGACCACGCCGACGAGGCCGTGTTGAAGGGGCAGCACTGGTTGGAGGGCAATGGCGGGCAGGATGCCg                             >  5:220448/1‑149 (MQ=255)                                                                                                                         tGGCTCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACTGGTTGCAGGGCAATGGCGGGCAGGATGCCGAc                           <  2:192404/149‑1 (MQ=255)                                                                                                                             tCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACTGGTTGCAGGGCAATGGCGGGCAGGATGCCGACCTgg                       >  6:256504/1‑149 (MQ=255)                                                                                                                                 gagaCCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACTGGTTGCAGGGCAATGGCGGGCAGGATGCCGACCTGGCCAc                   <  2:261845/149‑1 (MQ=255)                                                                                                                                      cgctcgctATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACTGGTTGCAGGGCAATGGCGGGCAGGATGCCGACCTGGCCACGATgg              >  8:81559/1‑149 (MQ=255)                                                                                                                                      cgcgcgctATCTGGCCGTCGATCCGGGCGCGGCGCCGCTGCCCGGCGCTGTGTCCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACTGGTTGCAGGGCAATGGCGGGCAGGATGCCGACCTGGCCACGATgg              <  7:59325/149‑1 (MQ=255)                                                                                                                                                 tGGCCGTCGATCCGGTCGCGGCGCCGATGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACTGGTTGCAGGGCAATGGCGGGCAGGATGCCGACCTGGCCACGATGGCGGCCTGcgcg   >  8:196598/1‑149 (MQ=255)                                                                                                                                                   GCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACTGGTTGCAGGGCAATGGCGGGCAGGATGCCGACCTGGCCACGATGGCGGCCTGCGCgg  >  5:256504‑M1/1‑148 (MQ=255)                                                                                                                                                   |                                                                                                                                                    GGGTGCGGGTAGAGGCTCAGCAGCCGTTGCTGGATGACGGCGACATCGTGACCTCGGCAGGGTTGATGGCCTGGACGGACCTCGGCTTGCGCCTGCTGGAGCGCTTTTTGGGGACGACGGTGGCTCAGGAGACCGCTCGCTATCTGGCCGTCGATCCGGTCGCGGCGCCGCTGCCCGGCGCTGTGTTCAACCCGCGCCTGGACCACGGCGACGAGGCCGTGTTGAAGGTGCAGCACTGGTTGCAGGGCAATGGCGGGCAGGATGCCGACCTGGCCACGATGGCGGCCTGCGCGG  >  NC_002947/2541915‑2542208

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.