New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 399214848 (0.930)3 (0.060) 3/246 NT 5.8% coding (921/1446 nt) PP_3518 hypothetical protein
?NC_002947 = 3992171 52 (1.060)coding (898/1446 nt) PP_3518 hypothetical protein

GGTTACTGGTAGCCGGCCGTTCGATACCTGCGCGGTCCATCGATGCCCTGGCTTTGTCTCGGGCCTGGGCCCGTTGGGCGTCGTCGCCGCGGAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTCGCGGTATGGCACACCGTCTCGGTTGGCGGAATTGTGCTGCCATTTGTTCTGGTTGTTGGTGATGCGGTTGTTGACGTTGAGGTTGTTGTAGCGGTTGACGTCAATGTCGATGTCATTGTTGTCC  >  NC_002947/3992015‑3992292
                                                                                                                                     |                                                                                                                                                 
ggTTACTGGTAGCCGGCCGTTCGATACCTGCGCGGTCCATCGATGCCCTGGCTTTGTCTCGGGCCTGGGCCCGTTGGGCGTCGTTGCCGCGGAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCga                                                                                                                                    <  5:43403/149‑1 (MQ=255)
ggTTACTGGTAGCCGGCCGTTCGATACCTGCGCGGTCCATCGATGCCCTGGCTTTGTCTCGGGCCTGGGCCCGTTGGGCGTCGTCGCCGCGGAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCga                                                                                                                                    <  7:139186/149‑1 (MQ=255)
      tGGTAGCCGGCCGTTCGATACCTGCGCGGTCCATCGATGCCCTGGCTTTGTCTCGGGCCTGGGCCCGTTGGGCGTCGTCGCCGCGGAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTcg                                                                                                                              >  8:235002/1‑149 (MQ=255)
      tGGTAGCCGGCCGTTCGATACCTGCGCGGTCCATCGATGCCCTGGCTTTGTCTCGGGCCTGGGCCCGTTGGGCGTCGTCGCCGCGGAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTcg                                                                                                                              >  3:85996/1‑149 (MQ=255)
        gTAGCCGGCCGTTCGATACCTGCGCGGTCCATCGATGCCCTGGCTTTGTCTCGGGCCTGGGCCCGTTGGGCGTCGTCGCCGCGGAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTcgcg                                                                                                                            <  1:241799/149‑1 (MQ=255)
        gTAGCCGGCCGTTCGATACCTGCGCGGTCCATCGATGCCCTGGCTTTGTCTCGGGCCTGGGCCCGTTGGGCGTCGTCGCCGCGGAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTcgcg                                                                                                                            >  2:241799/1‑149 (MQ=255)
            ccggccgTTCGATACCTGCGCGGTCCATCGATGCCCTGGCTTTGTCTCGGGCCTGGGCCCGTTGGGCGTCGTCGCCGCGGAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTCGCGgtat                                                                                                                        >  6:182826‑M2/1‑145 (MQ=255)
              ggccgTTCGATACCTGCGCGGTCCATCGATGCCCTGGCTTTGTCTCGGGCCTGGGCCCGTTGGGCGTCGTCGCCGCGGAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTcgcg                                                                                                                            <  8:69166/143‑1 (MQ=255)
              ggccgTTCGATACCTGCGCGGTCCATCGATGCCCTGGCTTTGTCTCGGGCCTGGGCCCGTTGGGCGTCGTCGCCGCGGAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTcgcg                                                                                                                            >  7:69166/1‑143 (MQ=255)
              ggccgTTCGATACCTGCGCGGTCCATCGATGCCCTGGCTTTGTCTCGGGCCTGGGCCCGTTGGGCGTCGTCGCCGCGGAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTCGCGgtatgg                                                                                                                      >  7:235002‑M2/1‑143 (MQ=255)
                  gTTCGGTACCTGCGCGGTCCATCGATGCCCTGGCTTTGTCTCGGGCCTGGGCCCGTTGGGCGTCGTCGCCGCGGAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTCGCGGTATGGcaca                                                                                                                 >  6:90216/1‑149 (MQ=255)
                  gTTCGATACCTGCGCGGTCCATCGATGCCCTGGCTTTGTCTCGGGCCTGGGCCCGTTGGGCGTCGTCGCCGCGGAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACcgcgactctcgcagccgtcagcagtatggccgc                                                                                                                  <  1:309819‑M1/149‑34 (MQ=255)
                      gATACCTGCGCGGTCCATCGATGCCCTGGCTTTGTCTCGGGCCTGGGCCCGTTGGGCGTCGTCGCCGCGGAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTCGCGGTATGGCACACCGt                                                                                                             >  1:177282/1‑149 (MQ=255)
                              cgcgGTCCATCGATGCCCTGGCTTTGTCTCGGGCCTGGGCCCGTTGGGCGTCGTCGCCGCGGAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTCGCGGTATGGCACACCGTCTCGGt                                                                                                       <  2:39831/147‑1 (MQ=255)
                                cgGTCCATCGATGCCCTGGCTTTGTCTCGGGCCTGGGCCCGTTGGGCGTCGTCGCCGCGGAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTCGCGGTATGGCACACCGTCTCGGTTGGc                                                                                                   <  8:139302/149‑1 (MQ=255)
                                   tCCATCGATGCCCTGGCTTTGTCTCGGGCCTGGGCCCGTTGGGCGTCGTCGCCGCGGAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTCGCGGTATGGCACACCGTCTCGGTTGGCgg                                                                                                 >  8:209335/1‑148 (MQ=255)
                                     cATCGATGCCCTGGCTTTGTCTCGGGCCTGGGCCCGTTGGGCGTCGTCGCCGCGGAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTCGCGGTATGGCACACCGTCTCGGTTGGCGGAAt                                                                                              >  3:312555/1‑149 (MQ=255)
                                         gttggccTGGCTTTGTCTCGGCGCTGGGGCCGTTGGGCGTCGTCGCCGCGGAACGCGGTGCGCTGAGTGGCAGCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTCGCGGTTTGGCACACCGTCTCGGTTGGCGGAATtgtg                                                                                          <  4:276713/144‑1 (MQ=255)
                                          aTGACCTGGCTTTGTCGCGGGCCTGGGCCCGTTGGGCGTCGTCGCCGCGGAACGCGGTGCGCTGAGTGGACACGTCCAGTTGGCGGCCATACTGCTGCCGGCTGCGAGAGTCGCGGTATGGCACACCGTCTCGGTTGGCGGAATTGtgc                                                                                         >  6:292877/1‑149 (MQ=255)
                                              ccTGGCTTTGTCTCGGGCCTGGGCCCGTTGGGCGTCGTCGCCGCGGAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTCGCGGTATGGCACACCGTCTCGGTTGGCGGAATTGtgctgc                                                                                      >  7:302488/1‑148 (MQ=255)
                                               cTGGCTTTGTCTCGGGCCTGGGCCCGTTGGGCGTCGTCGCCGCGGAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTCGCGGTATGGCACACCGTCTCGGTTGGCGGAATTGTGCTGCCa                                                                                    >  2:78462/1‑149 (MQ=255)
                                                tGGCTTTGTCTCGGGCCTGGGCCCGTTGGGCGTCGTCGCCGCGGAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTCGCGgta                                                                                                                         >  6:168013‑M2/1‑109 (MQ=255)
                                                tGGCTTTGTCTCGGGCCTGGGCCCGTTGGGCGTCGTCGCCGCGGAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTCGCGgta                                                                                                                         <  5:168013‑M2/112‑4 (MQ=255)
                                                  gCTTTGTCTCGGGCCTGGGCCCGTTGGGCGTCGTCGCCGCGGAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTCGCGGTATGGCACACCGTCTCGGTTGGCGGAATTGTGCTGCCAtt                                                                                  <  4:85996/148‑1 (MQ=255)
                                                     gcccaacGGGCCCAGGCCCGTTGGGCGTCGTCGCCGCGGAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTCGCGGTATGGCACACCGTCTCGGTTGGCGGAATTGTGCTGCCATTTGt                                                                               >  2:187363/7‑148 (MQ=255)
                                                        tctcGGGCCTGGGCCCGTTGGGCGTCGTCGCCGCGGAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTCGCGGTATGGCACACCGTCTCGGTTGGCGGAATTGTGCTGCCATTTGTTCTg                                                                           <  2:316884/149‑1 (MQ=255)
                                                         ctcGGGCCTGGGCCCGTTGGGCGTCGTCGCCGCGGAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTCGCGGTATGGCACACCGTCTCGGTTGGCGGAATTGTGCTGCCATTTGTTCTgg                                                                          >  6:324590/1‑149 (MQ=255)
                                                          tcGGGCCTGGGCCCGTTGGGCGTCGTCGCCGCGGAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTCGCGGTATGGCACACCGTCTCGGTTGGCGGAATTGTGCTGCCATTTGTTCTGgt                                                                         >  7:13503/1‑149 (MQ=255)
                                                           cGGGCCTGGGCCCGTTGGGCGTCGTCGCCGCGGAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTCGCGGTATGGCACACCGTCTCGGTTGGCGGAATTGTGCTGCCATTTGTTCTGgtt                                                                        >  2:175456/1‑149 (MQ=255)
                                                            gggCCTGGGCCCGTTGGGCGTCGTCGCCGCGGAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTCGCGGTATGGCACACCGTCTCGGTTGGCGGAATTGTGCTGCCATTTGTTCTgg                                                                          <  2:177282/146‑1 (MQ=255)
                                                            gggCCTGGGCCCGTTGGGCGTCGTCGCCGCGGAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTCGCGGTATGGCACACCGTCTCGGTTGGCGGAATTGTGCTGCCATTTGTTCTGgttg                                                                       >  7:232618/1‑149 (MQ=255)
                                                              gCCTGGGCCCGTTGGGCGTCGTCGCCGCGGAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTCGCGGTATGGCACACCGTCTCGGTTGGCTGAATTGTGCTGCCATTTGTTCTGgttgtt                                                                     <  5:90216/149‑1 (MQ=255)
                                                                ccaggCCCGTTGGGCGTCGTCGCCGCGGAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTCGCGGTATGGCACACCGTCTCGGTTGGCGGATTTGTGCTGCCATTTGTTCTGGTTGTTgg                                                                   <  1:187363/146‑1 (MQ=255)
                                                                cTGGGCCCGTTGGGCGTCGTCGCCGCGGAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTCGCGGTATGGCCACACCGTCTCGGTTGGCGGAATTGTGCTGCCATTTGTTCTGGttgttg                                                                    <  1:78462/149‑1 (MQ=255)
                                                                cTGGGCCCGTTGGGCGTCGTCGCCGCGGAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTCGCGGTATGGCACACCGTCTCGGTTGGCGGAATTGTGCTGCCATTTGTTCTGGTTGTTgg                                                                   <  4:312555/149‑1 (MQ=255)
                                                                   ggCCGGTTGGGCGTCGTCGGCGCGGAACGCGGTGCGCTGAGTGGCTCCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTCGCGGTATGGCACACCGTCTCGGTTGGCGGAATTGTGCTGCCATTTGTTCTGGTTGTTGGTg                                                                 <  3:47481/148‑1 (MQ=255)
                                                                    gCCCGTTGGGCGTCGTCGCCGCGGAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTCGCGGTATGGCACACCGTCTCGGTTGGCGGAATtgtg                                                                                          <  8:273017/122‑1 (MQ=255)
                                                                    gCCCGTTGGGCGTCGTCGCCGCGGAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTCGCGGTATGGCACACCGTCTCGGTTGGCGGAATtgtg                                                                                          >  7:273017/1‑122 (MQ=255)
                                                                    gCCCGTTGGGCGTCGTCGCCGCGGAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTCGCGGTATGGCACACCGTCTCGGTTGGCGGAATTGTGCTGCCAt                                                                                   >  6:142273/1‑129 (MQ=255)
                                                                    gCCCGTTGGGCGTCGTCGCCGCGGAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTCGCGGTATGGCACACCGTCTCGGTTGGCGGAATTGTGCTGCCAt                                                                                   <  5:142273/129‑1 (MQ=255)
                                                                       cGTTGGGCGTCGTCGCCGCGGAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACcgcgactctcgcagccgtcagcagtatgg                                                                                                                      <  1:25447‑M1/92‑30 (MQ=255)
                                                                       cGTTGGGCGTCGTCGCCGCGGAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACcgcgactctcgcagccgtcagcagtatgg                                                                                                                      >  2:25447‑M1/1‑63 (MQ=255)
                                                                        gTTGGGCGTCGTCGCCGCGGAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTCGCGGTATGGCACACCGTCTCGGTTGGCGGAATTGTGCTGCCATTTGTTCTGGTTGTTGGTGATGCgg                                                           <  8:302488/149‑1 (MQ=255)
                                                                            ggCGTCGTCGCCGCGGAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTCGCGGTATGGCACACCGTCTCGGTTGGCGGAATTGTGCTGCCATTTGTTCTGGTTGTTGGTGATGCGgttgt                                                       <  8:232618/149‑1 (MQ=255)
                                                                                   tcgCCGCGGAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTCGCGGTATGGCACACCGTCTCGGTTGGCGGAATTGTGCTGCCATTTGTTCTGGTTGTTGGTGATGCGGTTGTTGACGtt                                                <  6:171287/149‑1 (MQ=255)
                                                                                     gccgcGGAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTCGCGGTATGGCACACCGTCTCGGTTGGCGGAATTGTGCTGCCATTTGTTCTGGTTGTTGGTGATGCGGTTGTTGACGTTGa                                              <  7:209335/149‑1 (MQ=255)
                                                                                      ccgcGGAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTCGCGGTATGGCACACCGTCTCGGTTGGCGGAATTGTGCTGCCATTTGTTCTGgttgt                                                                      >  7:100921/1‑124 (MQ=255)
                                                                                      ccgcGGAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTCGCGGTATGGCACACCGTCTCGGTTGGCGGAATTGTGCTGCCATTTGTTCTGgttgt                                                                      <  8:100921/124‑1 (MQ=255)
                                                                                      ccgcGGAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTCGCGGTATGGCACACCGTCTCGGTTGGCGGAATTGTGCTGCCATTTGTTCTGGTTGTTGGTGATGCGGTTGTTGACGTTGAg                                             >  6:190064/1‑149 (MQ=255)
                                                                                          ggAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTCGCGGTATGGCACACCGTCTCGGTTGGCGGAATTGTGCTGCCATTTGTTCTGGTTGTTGGTGATGCGGTTGTTGACGTTGAGgttg                                         <  5:190064/149‑1 (MQ=255)
                                                                                            aaCGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTCGCGGTATGGCACACCGTCTCGGTTGGCGGAATTGTGCTGCCATTTGTTCTGGTTGTTGGTGATGCGGTTGTTGACGTTGAGgttgtt                                       <  8:13503/149‑1 (MQ=255)
                                                                                                 ggTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTCGCGGTATGGCACACCGTCTCGGTTGGCGGAATTGTGCTGCCATTTGTTCTGGTTGTTGGTGATGCGGTTGTTGACGTTGAGGTTGTTGTAGc                                  <  5:324590/149‑1 (MQ=255)
                                                                                                      gcTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTCGCGGTATGGCACACCGTCTCGGTTGGCGGAATTGTGCTGCCAGTTGTTGTGGTTGTTGGTGATGCGGTTGTTGACGTTGAGGTTGTTGTAGCGGTTg                             >  2:292566/1‑149 (MQ=255)
                                                                                                                  cGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTCGCGGTATGGCACACCGTCTCGGTTGGCGGAATTGTGCTGCCATTTGTTCTGGTTGTTGGTGATGCGGTTGTTGACGTTGAGGTTGTTGTAGCGGTTGACGTCAATGTc                  >  7:179440/1‑148 (MQ=255)
                                                                                                                   gTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTCGCGGTATGGCACACCGTCTCGGTTGGCGGAATTGTGCTGCCATTTGTTCTGGTTGTTGGTGATGCGGTTGTTGACGTTGAGGTTGTTGTAGCGGTTGACGTCAATGTCGa                <  5:197000/149‑1 (MQ=255)
                                                                                                                            gcggcCATACTGCTGACGGCTGCGAGAGTCGCGgtatggccgccaactggacggtgccactcagcgcaccgcgttccgcggcgacgacgcccaacgggcccaggcccgagacaaagccagggcatcgatggaccgcgcaggtatcgaac        <  1:309819‑M2/149‑117 (MQ=255)
                                                                                                                                ccATACcgcgactctcgcagccgtcagcagtatggccgccaactggacggtgccactcagcgcaccgcgttccgcggcgacgacgcccaacgggcccaggcccgagacaaagccagggcatcgatggaccgcgcaggtatcgaacggcc    >  7:235002‑M1/1‑6 (MQ=255)
                                                                                                                                ccATACTGCTGACGGCTGCGAGAGTCGCGgtatggccgccaactggacggtgccactcagcgcaccgcgttccgcggcgacgacgcccaacg                                                             >  2:25447‑M2/1‑29 (MQ=255)
                                                                                                                                ccATACTGCTGACGGCTGCGAGAGTCGCGgtatggccgccaactggacggtgccactcagcgcaccgcgttccgcggcgacgacgcccaacg                                                             <  1:25447‑M2/92‑64 (MQ=255)
                                                                                                                                 cATACTGCTGACGGCTGCGAGAGTCGCGGTATGGCACACCGTCTCGGTTGGCGGAATTGTGCTGCCATTTGTTCTGGTTGTTGGTGATGCGGTTGTTGACGTTGAGGTTGTTGTAGCg                                 >  3:129383/1‑118 (MQ=255)
                                                                                                                                 cATACTGCTGACGGCTGCGAGAGTCGCGGTATGGCACACCGGCTCGGTTGGCGGAATTGTGCTGCCATTTGTTCTGGTTGTTGGTGATGCGGTTGTTGACGTTGAGGTTGTTGTAGCg                                 <  4:129383/118‑1 (MQ=255)
                                                                                                                                  aTACcgcgactctcgcagccgtcagcagtatggccgccaactggacggtgccactcagcgcaccgcgttccgcggcgacgacgcccaacgggcccaggcccgagacaaagccagggcatcgatggaccgcgcaggtatcgaacggccgg  >  6:182826‑M1/1‑4 (MQ=255)
                                                                                                                                  aTACTGCTGACGGCTGCGAGAGTCGCGGTATGGCACACCGTCTCGGTTGGCGGAATTGTGCTGCCATTTGTTCTGGTTGTTGGTGATGCGGTTGTTGACGTTGAGGTTGTTGTAGCGGTTGACGTCAATGTCGATGTCATTGTTGTcc  >  1:51062/1‑148 (MQ=255)
                                                                                                                                   tACcgcgactctcgcagccgtcagcagtatggccgccaactggacggtgccactcagcgcaccgcgttccgcggcgacgacgcccaacgggcccaggcccgagacaaagcca                                      <  5:168013‑M1/112‑110 (MQ=255)
                                                                                                                                   tACcgcgactctcgcagccgtcagcagtatggccgccaactggacggtgccactcagcgcaccgcgttccgcggcgacgacgcccaacgggcccaggcccgagacaaagcca                                      >  6:168013‑M1/1‑3 (MQ=255)
                                                                                                                                     |                                                                                                                                                 
GGTTACTGGTAGCCGGCCGTTCGATACCTGCGCGGTCCATCGATGCCCTGGCTTTGTCTCGGGCCTGGGCCCGTTGGGCGTCGTCGCCGCGGAACGCGGTGCGCTGAGTGGCACCGTCCAGTTGGCGGCCATACTGCTGACGGCTGCGAGAGTCGCGGTATGGCACACCGTCTCGGTTGGCGGAATTGTGCTGCCATTTGTTCTGGTTGTTGGTGATGCGGTTGTTGACGTTGAGGTTGTTGTAGCGGTTGACGTCAATGTCGATGTCATTGTTGTCC  >  NC_002947/3992015‑3992292

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.