| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4626524 = | NA (NA) | 11 (0.210) | 5/260 | NT | NA | coding (980/1533 nt) | PP_4091 | transposase |
| ? | NC_002947 | 4626581 = | NA (NA) | coding (923/1533 nt) | PP_4091 | transposase | |||||
GACGACCGATGAATCGTTGTTCATCGCTGGCATCCTTGAGGTCGCGTTCGATGCCATACAGTTTGTTGATCATCGTCAGCGCAACATCGGCGCGACCGGTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAA‑TTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCTGGTGGTGTAATCGAA > NC_002947/4626378‑4626669 | gacgacCGATGAATCGTTGTTCATCGCTGGCATCCTTGAGGTCGCGTTCGATGCCATACAGTTTGTTGATCATCGTCAGCGCAACATCGGCGCGACCGGTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAA‑TTTACGCCGAACa > 1:88988/1‑149 (MQ=37) cgacCGATGAATCGTTGTTCATCGCTGGCATCCTTGAGGTCGCGTTCGATGCCATACAGTTTGTTGATCATCGTCAGCGCAACATCGGCGCGACCGGTCTTGCCCTTAGGCTGCCCCTTCTGCGCTTCGACGAA‑TTTACGCCGAACATg > 3:247477/1‑149 (MQ=37) ccGATGAATCGTTGTTCATCGCTGGCATCCTTGAGGTCGCGTTCGATGCCATACAGTTTGTTGATCATCGTCAGCGCAACATCGGCGCGACCGGTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAA‑TTTACGCCGAACATgcgc < 6:2626/149‑1 (MQ=37) gATGAATCGTTGTTCATCGCTGGCATCCTTGAGGTCGCGTTCGATGCCATACAGTTTGTTGATCATCGTCAGCGCAACATCGGCGCGACCGGTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAA‑TTTACGCCGAACATGCGCCa > 5:149255/1‑149 (MQ=37) aTCGTTGTTCATCGCTGGCATCCTTGAGGTCGCGTTCGATGCCATACAGTTTGTTGATCATCGTCAGCGCAACATCGGCGCGACCGGTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAA‑TTTACGCCGAACATGCGCCATGCAc > 7:43864/1‑149 (MQ=37) ttCATCGCTGGCATCCTTGAGGTCGCGTTCGATGCCATACAGTTTGTTGATCATCGTCAGCGCAACATCGGCGCGACCGGTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAA‑TTTACGCCGAACATGCGCCATGCACGCCAGTc < 2:88988/149‑1 (MQ=34) cTTGAGGTCGCGTTCGATGCCATACAGTTTGTTGATCATCGTCAGCGCAACATCGGCGCGACCGGTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAA‑TTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCt > 6:273322/1‑149 (MQ=34) ttGAGGTCGCGTTCGATGCCATACAGTTTGTTGATCATCGTCAGCGCAACATCGGCGCGACCGGTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAA‑TTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTg > 2:18120/1‑149 (MQ=34) ggTCGCGTTCGATGCCATACAGTTTGTTGATCATCGTCAGCGCAACATCGGCGCGACCGGTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAA‑TTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAgc > 8:170625/1‑149 (MQ=34) aTGCCATACAGTTTGTTGATCATCGTCAGCGCAACATCGGCGCGACCGGTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAA‑TTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGtt < 6:149255/149‑1 (MQ=34) gCCATACAGTTTGTTGATCATCGTCAGCGCAACATCGGCGCGACCGGTCTTGCCCTTAGGCTGCACCTTCTGCGCTTGGACGAA‑TTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTg > 1:106106/1‑148 (MQ=21) ccATACAGTTTGTTGATCATCGTCAGCGCAACATCGGCGCGACCGGTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAA‑TTTACGCCGAACATgcgc > 4:19289/1‑101 (MQ=35) ccATACAGTTTGTTGATCATCGTCAGCGCAACATCGGCGCGACCGGTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAA‑TTTACGCCGAACATgcgc < 3:19289/101‑1 (MQ=35) ccATACAGTTTGTTGATCATCGTCAGCGCAACATCGGCGCGACCGGTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAA‑TTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGt < 7:170625/148‑1 (MQ=34) tttGTTGATCATCGTCAGCGCAACATCGGCGCGACCGGTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAA‑TTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCg > 5:164597/1‑148 (MQ=34) ttgATCATCGTCAGCGCAACATCGGCGCGACCGGTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAA‑TTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAat > 6:178903/1‑148 (MQ=34) gATCATCGTCAGCGCAACATCGGCGCGACCGGTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAA‑TTTACGCCGAACATGCGCCATGCACGCCGGGCGTTGAACGACTGGcgtgcat < 4:38444/121‑7 (MQ=11) gATCATCGTCAGCGCAACATCGGCGCGACCGGTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAA‑TTTACGCCGAACATGCGCCATGCACGCCGGGCGTTGAACGACTGGcgtgcat > 3:38444/1‑115 (MQ=11) gATCATCGTCAGCGCAACATCGGCGCGACCGGTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAA‑TTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAatcat > 7:148341/1‑149 (MQ=34) atcatcGTCAGCGCAACATCGGCGCGACCGGGCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAA‑TTTACGCCGCACATGCGCCATGCACGCCAGTCTTTCAACGCCCGGCTGTAGCGCCACCGCGTTGTAACCGGCGTAatcatc > 7:165706/1‑149 (MQ=255) tcatcGTCATCTCAACATCGGCGCTACCGGTATTGCACTTAGGCTGCACATTCTGCGCTTCGACGAA‑TTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCg < 5:177573/149‑1 (MQ=11) tcGTCAGCGCAACATCGGCGCGACCGGTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAA‑TTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGt > 2:225414/1‑148 (MQ=34) gTCAGCGCAACATCGGCGCGACCGGTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAA‑TTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGtcat > 3:177240/1‑149 (MQ=34) tCAGCGCAACATCGGCGCGACCGGTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAT‑TTTAGGCCGAACATGCGCCATGCACGCCAGTCGTTCAAc < 8:18768/100‑1 (MQ=255) tCAGCGCAACATCGGCGCGACCGGTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAA‑TTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAAc > 7:18768/1‑100 (MQ=37) aGCGCAACATCGGCGCGACCGGTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAA‑TTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCAc > 6:119817/1‑149 (MQ=34) gcgcAACATCGGCGCGACCGGTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAA‑TTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACg > 5:249791/1‑149 (MQ=34) gcgcGACCGGTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAAGTTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGa > 1:73241/1‑148 (MQ=21) cgcgACCGGTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAA‑TTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAg < 5:178903/149‑1 (MQ=34) gCCCTTAGGCTGCACCTTCTGCGCTTCGACGAA‑TTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAgg < 1:18120/148‑1 (MQ=32) ccTTAGGCTGCACCTTCTGCGCTTCGACGAA‑TTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGgcgc < 2:106106/149‑1 (MQ=32) gCTGCACCTTCTGCGCTTCGACGAA‑TTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGc < 5:242746/149‑1 (MQ=32) gCACCTTCTGCGCTTCGACGAA‑TTTACGCCGAACATGCGCCATGCTCGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCAcc > 1:232321/1‑149 (MQ=17) cACCTTCTGCGCTTCGACGAA‑TTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCAcct > 3:211927/1‑149 (MQ=32) aCCTTCTGCGCTTCGACGAA‑TTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCAcctc > 5:171859/1‑149 (MQ=32) ccTTCTGCGCTTCGACGAA‑TTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCAcctcc < 8:148341/149‑1 (MQ=32) ccTTCTGCGCTTCGACGAA‑TTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCAcctcc < 8:43864/149‑1 (MQ=32) ttCTGCGCTTCGACGAA‑TTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTg > 8:256767/1‑149 (MQ=32) ttCGACGAA‑TTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGgcgc < 4:69841/127‑1 (MQ=32) ttCGACGAA‑TTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGgcgc > 3:69841/1‑127 (MQ=32) acgaA‑TTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCg > 2:290729/1‑78 (MQ=34) acgaA‑TTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCg < 1:290729/78‑1 (MQ=34) gaA‑TTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCtggtgg > 3:83776/1‑149 (MQ=32) aa‑TTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCTggtggt < 2:73241/149‑1 (MQ=32) cGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCTGGTGGTGTAAt < 2:232321/148‑1 (MQ=32) ccGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCTGGTGGTGTAATCg > 3:63360/1‑148 (MQ=32) cGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCTGGTGGTGTAATCGaa > 7:197311/1‑149 (MQ=32) | GACGACCGATGAATCGTTGTTCATCGCTGGCATCCTTGAGGTCGCGTTCGATGCCATACAGTTTGTTGATCATCGTCAGCGCAACATCGGCGCGACCGGTCTTGCCCTTAGGCTGCACCTTCTGCGCTTCGACGAA‑TTTACGCCGAACATGCGCCATGCACGCCAGTCGTTCAACGCCCGGCTGTAGCGCCAACGCGTTGTAACCGGCGTAATCATCGGTCATCACGTAACCGCGATAGCCCTCCAGCAGGCGCAGCGGCACCTCCTGCGCGCGGCTGGTGGTGTAATCGAA > NC_002947/4626378‑4626669 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |