New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5627319 =	48 (0.930)	3 (0.060)	3/252	NT	5.3%	coding (183/1758 nt)	PP_4944	carbamoyltransferase
	?	NC_002947	5627357 =	60 (1.200)					coding (145/1758 nt)	PP_4944	carbamoyltransferase

CGATAGCGCTTGTAGCGACGATTGCCCATTAGGATGGCATCGAGTGCACGATCCGGGGCGTACCAATAGCGCTTGGCATAGTGCCACCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACC‑ACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGTCAATGTACAGGGCCGCGGAAGGGTCATGGCTAA  >  NC_002947/5627173‑5627467                                                                                                                                                    |                                                                                                                                                     ggATAGCGCTTGTAGCGACGATTGCCCATTAGGATGGCATCGAGTGCACGATCCGGGGCGTACCAATAGCGCTTGGCATAGTGCCACCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACC‑ACGTCGACGTCGGACgg                                                                                                                                                    <  1:282184/148‑1 (MQ=255) ccttggcattgacgattcttggcctgtccggcgcccttagccatgacccttccgcggccctgtacattgacggcaagctgattgccgccgccgaagaagagcgcttcgtgcgtgacaagcatgcgaagaaccgcatgccctacgagtCg                                                                                                                                                     >  7:170610‑M1/148‑149 (MQ=255)          ttGTAGCGACGATTGCCCATTAGGATGGCATCGAGTGCACGATCCGGGGCGTACCAATAGCGCTTGGCATAGTGCCACCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACC‑ACGTCGACGTCGGACGGCTTGAtgcc                                                                                                                                           >  7:305292/1‑149 (MQ=255)               gCGACGATTGCCCATTAGGATGGCATCGAGTGCACGATCCGGGGCGTACCAATAGCGCTTGGCATAGTGCCACCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACC‑ACGTCGACGTCGGACGGCTTGATgcctgcct                                                                                                                                      >  5:42689/1‑149 (MQ=255)               gCGACGATTGCCCATTAGGATGGCATCGAGTGCACGATCCGGGGCGTACCAATAGCGCTTGGCATAGTGCCACCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACC‑ACGTCGACGTCGGACGGCTTGATgcctgcct                                                                                                                                      >  4:74198/1‑149 (MQ=255)                    gaTTGCCCATTAGGATGGCATCGAGTGCACGATCCGGGGCGTACCAATAGCGCTTGGCATAGTGCCACCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACC‑ACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTcc                                                                                                                                 <  7:143167/149‑1 (MQ=255)                    gaTTGCCCATTAGGATGGCATCGAGTGCACGATCCGGGGCGTACCAATAGCGCTTGGCATAGTGCCACCGCGCCTTGCCGAACAGGCCGATCGGGGCGAACGGGATGGCTACC‑ACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTcc                                                                                                                                 <  2:213942/149‑1 (MQ=255)                         cccATTAGGATGGCATCGAGTGCACGATCCGGGGCGTACCAATAGCGCTTGGCATAGTGCCACCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACC‑ACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGc                                                                                                                             <  5:109087/148‑1 (MQ=255)                          ccATTAGGATGGCATCGAGTGCACGATCCGGGGCGTACCAATAGCGCTTGGCATAGTGCCACCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACC‑ACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAgg                                                                                                                              >  4:57621/1‑146 (MQ=255)                               aGGATGGCATCGAGTGCACGATCCGGGGCGTACCAATAGCGCTTGGCATAGTGCCACCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACC‑ACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACtt                                                                                                                      >  5:128554/1‑149 (MQ=255)                                ggATGGCATCGAGTGCACGATCCGGGGCGTACCAATAGCGCTTGGCATAGTGCCACCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACC‑ACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTc                                                                                                                     <  8:203192/149‑1 (MQ=255)                                          gAGTGCACGATCCGGGGCGTACCAATAGCGCTTGGCATAGTGCCACCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACC‑ACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGt                                                                                                           <  7:242056/149‑1 (MQ=255)                                              acccttccgcggccctgtacattgacggcaagctgattgccgccgccgaagaagagcgcttcgtgcgtgacaagcatgcgaagaaccgcatgccctacgagtCGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAgg                                                                                                        >  6:299641‑M1/103‑149 (MQ=255)                                               cACGATCCGGGGCGTACCAATAGCGCTTGGCATAGTGCCACCGAGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACC‑ACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTAGACGACTCGTAggg                                                                                                       >  3:82665/1‑148 (MQ=255)                                                 cGATCCGGGGCGTACCAATAGCGCTTGGCATAGTGCCACCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACC‑ACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCAt                                                                                                    >  7:89637/1‑149 (MQ=255)                                                      gcggccctgtacattgacggcaagctgattgccgccgccgaagaagagcgcttcgtgcgtgacaagcatgcgaagaaccgcatgccctacgagtCGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGa                                                                                                                >  7:242974‑M1/95‑133 (MQ=255)                                                      gcggccctgtacattgacggcaagctgattgccgccgccgaagaagagcgcttcgtgcgtgacaagcatgcgaagaaccgcatgccctacgagtCGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGa                                                                                                                <  8:242974‑M1/39‑1 (MQ=255)                                                           cGTACCAATAGCGCTTGGCATAGTGCCACCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACC‑ACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGttcttc                                                                                          <  3:74198/149‑1 (MQ=255)                                                            gTACCAATAGCGCTTGGCATAGTGCCACCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACC‑ACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGttcttc                                                                                          >  8:118791/1‑148 (MQ=255)                                                            gTACCAATAGCGCTTGGCATAGTGCCACCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACC‑ACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGttcttc                                                                                          <  7:118791/148‑1 (MQ=255)                                                              aCCAATAGCGCTTGGCATAGTGCCACCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACC‑ACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCa                                                                                       >  3:35131/1‑149 (MQ=255)                                                               ccAATAGCGCTTGGCATAGTGCCACCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACC‑ACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCa                                                                                       <  8:237169/148‑1 (MQ=255)                                                               ccAATAGCGCTTGGCATAGTGCCACCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACC‑ACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCAt                                                                                      <  3:308489/149‑1 (MQ=255)                                                                 aaTAGCGCTTGGCATAGTGCCACCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACC‑ACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGttcttc                                                                                          >  4:292140/1‑143 (MQ=255)                                                                 aaTAGCGCTTGGCATAGTGCCACCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACC‑ACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGttcttc                                                                                          <  3:292140/143‑1 (MQ=255)                                                                   tAGCGCTTGGCATAGTGCCACCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACC‑ACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCtt                                                                                  <  6:42689/149‑1 (MQ=255)                                                                       gcTTGGCATAGTGCCACCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACC‑ACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGTCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTca                                                                              <  6:128554/149‑1 (MQ=255)                                                                       gcTTGGCATAGTGCCACCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACC‑ACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTca                                                                              >  6:64581/1‑149 (MQ=255)                                                                                  tGCCACCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACC‑ACGTCGACGTCGGACGGCTTGATGCCTGCCTATTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAgcg                                                                   >  5:4906/1‑149 (MQ=255)                                                                                    ccACCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACC‑ACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGct                                                                 >  7:94029/1‑149 (MQ=255)                                                                                      aCCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACCGACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGctc                                                                >  1:238921/1‑149 (MQ=255)                                                                                      aCCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACC‑ACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGctct                                                               >  8:180450/1‑149 (MQ=255)                                                                                      aCCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACC‑ACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGctct                                                               >  8:299206/1‑149 (MQ=255)                                                                                       ccGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACC‑ACGTCGACGTCGGACGGCTTGATGCCTGCCTATTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCtctt                                                              <  6:4906/149‑1 (MQ=255)                                                                                            ccTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACC‑ACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGc                                                                                    >  7:98734/1‑122 (MQ=255)                                                                                            ccTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACC‑ACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGc                                                                                    <  8:98734/122‑1 (MQ=255)                                                                                                gCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACC‑ACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTcggc                                                       <  7:180450/147‑1 (MQ=255)                                                                                                  cGAACAGGCTGATCGGGGCGAACGGGATGGCTACC‑ACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTcggcggcg                                                   <  2:238921/149‑1 (MQ=255)                                                                                                   taaCAGGCTGATCTGGGCTAACGTGATGGCTACC‑ACGTCGCATTCGGACTGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGTCATGCGGTTATTCGCATGCTTGTCAAGCACTAATCGCTCTTCTTcggcggcgg                                                  <  4:82665/148‑1 (MQ=255)                                                                                                   gAACAGGCTGATCGGGGCGAACGGGATGGCTACC‑ACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTcggcggcgg                                                  >  6:66721/1‑149 (MQ=255)                                                                                                         gCTGATCGGGGCGAACGGGATGGCTACC‑ACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAAt                                              >  2:107442/1‑147 (MQ=255)                                                                                                                 gggCGAACGGGATGGCTACC‑ACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCg                                    >  7:204267/1‑149 (MQ=255)                                                                                                                  ggCGAACGGGATGGCTACC‑ACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGt                                   <  5:66721/149‑1 (MQ=255)                                                                                                                   gCGAACGGGATGGCTACC‑ACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTcggc                                                       <  7:164102/128‑1 (MQ=255)                                                                                                                   gCGAACGGGATGGCTACC‑ACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTcggc                                                       >  8:164102/1‑128 (MQ=255)                                                                                                                      aaCGGGATGGCTACC‑ACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGTCAAt                               <  7:105295/149‑1 (MQ=255)                                                                                                                           gATGGCTACC‑ACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTAGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGTCAATGTa                            >  3:9721/1‑147 (MQ=255)                                                                                                                                    c‑ACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCAGACTCGTAAGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGTCAATGTACAGGGc                      >  1:258904/1‑144 (MQ=255)                                                                                                                                     caggtcgacgtcgGACGGCTTGATGCCTGCGTGTTCCAGGCAGAAGTTCGCCGACTCGTATGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGTCAATGTACAGGGc                      <  2:258904/141‑1 (MQ=255)                                                                                                                                        gtcgacgtcgGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGTCAATGTACAGGGCCGCGGAAg              >  2:212032/1‑149 (MQ=255)                                                                                                                                         tcgacgtcgGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGTCAATGTACAGGGCCGCGGAAgg             <  4:273705/149‑1 (MQ=255)                                                                                                                                              gtcgGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGTCAATGTACAGGGCCGCGGAAGTGTCAt        <  4:9721/149‑1 (MQ=255)                                                                                                                                              gtcgGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGTCAATGTACAGGGCCGCGGAAGGGTCAt        >  7:160270/1‑149 (MQ=255)                                                                                                                                                  gACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGTCAATGTACAGGGCCGCGGAAGGGTCATGGCt    <  8:305292/149‑1 (MQ=255)                                                                                                                                                   aCGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGTCAATGTACAGGGCCGCGGAAGGGTCATGGCt    >  6:180558/1‑148 (MQ=255)                                                                                                                                                    CGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGTCAATGTACAGGGCCGCGGAAGGGTCATGGCTaa  >  7:299206‑M1/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                     CGATAGCGCTTGTAGCGACGATTGCCCATTAGGATGGCATCGAGTGCACGATCCGGGGCGTACCAATAGCGCTTGGCATAGTGCCACCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACC‑ACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGTCAATGTACAGGGCCGCGGAAGGGTCATGGCTAA  >  NC_002947/5627173‑5627467

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.