New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5627319 =48 (0.930)3 (0.060) 3/252 NT 5.3% coding (183/1758 nt) PP_4944 carbamoyltransferase
?NC_002947 5627357 = 60 (1.200)coding (145/1758 nt) PP_4944 carbamoyltransferase

GAGTGCACGATCCGGGGCGTACCAATAGCGCTTGGCATAGTGCCACCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACCACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGTCAATGTACAGGGCCGCGGAAGGGTCATGGCTAAGGGCGCCGGACAGGCCAAGAATCGTCAATGCCAAGG  >  NC_002947/5627214‑5627503
                                                                                                                                                |                                                                                                                                                  
gAGTGCACGATCCGGGGCGTACCAATAGCGCTTGGCATAGTGCCACCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACCACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGt                                                                                                                                               <  7:242056/149‑1 (MQ=255)
    acccttccgcggccctgtacattgacggcaagctgattgccgccgccgaagaagagcgcttcgtgcgtgacaagcatgcgaagaaccgcatgccctacgagtCGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAgg                                                                                                                                            >  6:299641‑M1/103‑149 (MQ=255)
     cACGATCCGGGGCGTACCAATAGCGCTTGGCATAGTGCCACCGAGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACCACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTAGACGACTCGTAggg                                                                                                                                           >  3:82665/1‑148 (MQ=255)
       cGATCCGGGGCGTACCAATAGCGCTTGGCATAGTGCCACCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACCACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCAt                                                                                                                                        >  7:89637/1‑149 (MQ=255)
            gcggccctgtacattgacggcaagctgattgccgccgccgaagaagagcgcttcgtgcgtgacaagcatgcgaagaaccgcatgccctacgagtCGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGa                                                                                                                                                    >  7:242974‑M1/95‑133 (MQ=255)
            gcggccctgtacattgacggcaagctgattgccgccgccgaagaagagcgcttcgtgcgtgacaagcatgcgaagaaccgcatgccctacgagtCGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGa                                                                                                                                                    <  8:242974‑M1/39‑1 (MQ=255)
                 cGTACCAATAGCGCTTGGCATAGTGCCACCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACCACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGttcttc                                                                                                                              <  3:74198/149‑1 (MQ=255)
                  gTACCAATAGCGCTTGGCATAGTGCCACCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACCACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGttcttc                                                                                                                              >  8:118791/1‑148 (MQ=255)
                  gTACCAATAGCGCTTGGCATAGTGCCACCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACCACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGttcttc                                                                                                                              <  7:118791/148‑1 (MQ=255)
                    aCCAATAGCGCTTGGCATAGTGCCACCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACCACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCa                                                                                                                           >  3:35131/1‑149 (MQ=255)
                     ccAATAGCGCTTGGCATAGTGCCACCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACCACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCa                                                                                                                           <  8:237169/148‑1 (MQ=255)
                     ccAATAGCGCTTGGCATAGTGCCACCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACCACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCAt                                                                                                                          <  3:308489/149‑1 (MQ=255)
                       aaTAGCGCTTGGCATAGTGCCACCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACCACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGttcttc                                                                                                                              >  4:292140/1‑143 (MQ=255)
                       aaTAGCGCTTGGCATAGTGCCACCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACCACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGttcttc                                                                                                                              <  3:292140/143‑1 (MQ=255)
                         tAGCGCTTGGCATAGTGCCACCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACCACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCtt                                                                                                                      <  6:42689/149‑1 (MQ=255)
                             gcTTGGCATAGTGCCACCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACCACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGTCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTca                                                                                                                  <  6:128554/149‑1 (MQ=255)
                             gcTTGGCATAGTGCCACCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACCACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTca                                                                                                                  >  6:64581/1‑149 (MQ=255)
                                        tGCCACCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACCACGTCGACGTCGGACGGCTTGATGCCTGCCTATTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAgcg                                                                                                       >  5:4906/1‑149 (MQ=255)
                                          ccACCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACCACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGct                                                                                                     >  7:94029/1‑149 (MQ=255)
                                            aCCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACCGACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGctc                                                                                                    >  1:238921/1‑149 (MQ=255)
                                            aCCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACCACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGctct                                                                                                   >  8:299206/1‑149 (MQ=255)
                                            aCCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACCACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGctct                                                                                                   >  8:180450/1‑149 (MQ=255)
                                             ccGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACCACGTCGACGTCGGACGGCTTGATGCCTGCCTATTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCtctt                                                                                                  <  6:4906/149‑1 (MQ=255)
                                                  ccTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACCACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGc                                                                                                                        >  7:98734/1‑122 (MQ=255)
                                                  ccTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACCACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGc                                                                                                                        <  8:98734/122‑1 (MQ=255)
                                                      gCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACCACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTcggc                                                                                           <  7:180450/147‑1 (MQ=255)
                                                        cGAACAGGCTGATCGGGGCGAACGGGATGGCTACCACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTcggcggcg                                                                                       <  2:238921/149‑1 (MQ=255)
                                                         taaCAGGCTGATCTGGGCTAACGTGATGGCTACCACGTCGCATTCGGACTGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGTCATGCGGTTATTCGCATGCTTGTCAAGCACTAATCGCTCTTCTTcggcggcgg                                                                                      <  4:82665/148‑1 (MQ=255)
                                                         gAACAGGCTGATCGGGGCGAACGGGATGGCTACCACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTcggcggcgg                                                                                      >  6:66721/1‑149 (MQ=255)
                                                               gCTGATCGGGGCGAACGGGATGGCTACCACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAAt                                                                                  >  2:107442/1‑147 (MQ=255)
                                                                       gggCGAACGGGATGGCTACCACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCg                                                                        >  7:204267/1‑149 (MQ=255)
                                                                        ggCGAACGGGATGGCTACCACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGt                                                                       <  5:66721/149‑1 (MQ=255)
                                                                         gCGAACGGGATGGCTACCACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTcggc                                                                                           <  7:164102/128‑1 (MQ=255)
                                                                         gCGAACGGGATGGCTACCACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTcggc                                                                                           >  8:164102/1‑128 (MQ=255)
                                                                            aaCGGGATGGCTACCACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGTCAAt                                                                   <  7:105295/149‑1 (MQ=255)
                                                                                 gATGGCTACCACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTAGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGTCAATGTa                                                                >  3:9721/1‑147 (MQ=255)
                                                                                          cACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCAGACTCGTAAGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGTCAATGTACAGGGc                                                          >  1:258904/1‑144 (MQ=255)
                                                                                           caggtcgacgtcgGACGGCTTGATGCCTGCGTGTTCCAGGCAGAAGTTCGCCGACTCGTATGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGTCAATGTACAGGGc                                                          <  2:258904/141‑1 (MQ=255)
                                                                                              gtcgacgtcgGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGTCAATGTACAGGGCCGCGGAAg                                                  >  2:212032/1‑149 (MQ=255)
                                                                                               tcgacgtcgGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGTCAATGTACAGGGCCGCGGAAgg                                                 <  4:273705/149‑1 (MQ=255)
                                                                                                 cctacgagtcggcgaagttctgcctggaacaggcaggcatcaagccgACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGTCAATGTACAGGGCCGCGGAAGGGt                                               >  6:299641‑M2/48‑149 (MQ=255)
                                                                                                    gtcgGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGTCAATGTACAGGGCCGCGGAAGTGTCAt                                            <  4:9721/149‑1 (MQ=255)
                                                                                                    gtcgGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGTCAATGTACAGGGCCGCGGAAGGGTCAt                                            >  7:160270/1‑149 (MQ=255)
                                                                                                        gACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGTCAATGTACAGGGCCGCGGAAGGGTCATGGCt                                        <  8:305292/149‑1 (MQ=255)
                                                                                                         tcggcgaagttctgcctggaacaggcaggcatcaagccgACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGTCAATGTACAGGGCcgc                                                       >  7:242974‑M2/40‑133 (MQ=255)
                                                                                                         tcggcgaagttctgcctggaacaggcaggcatcaagccgACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGTCAATGTACAGGGCcgc                                                       <  8:242974‑M2/94‑1 (MQ=255)
                                                                                                         aCGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGTCAATGTACAGGGCCGCGGAAGGGTCATGGCt                                        >  6:180558/1‑148 (MQ=255)
                                                                                                          CGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGTCAATGTACAGGGCCGCGGAAGGGTCATGGCTaa                                      >  7:299206‑M1/1‑149 (MQ=255)
                                                                                                            GCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGTCAATGTACAGGGCCGCGGAAGGGTCATGGCTAAgg                                    <  5:40526‑M1/149‑1 (MQ=255)
                                                                                                                 aTGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGTCAATGTACAGGGCCGCGGAAGGGTCATGGCTAAGGGCGcc                               <  4:35131/149‑1 (MQ=255)
                                                                                                                 aTGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGTCAATGTACAGGGCCGCGGAAGGGTCATGGCTAAGGGCGcc                               >  3:263145/1‑149 (MQ=255)
                                                                                                                  tgcctgccTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGTCAATGTACAGGGCCGCGGAAGGGTCATGGCTAAGGGCGCCg                              <  8:94029/149‑1 (MQ=255)
                                                                                                                   gcctgcctGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGTCAATGTACAGGGCCGCGGAAGGGTCATGGCTAAGGGCGCCg                              >  4:245968/1‑148 (MQ=255)
                                                                                                                   gcctgcctGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGCCGGCGGCAATCAGCTTGCCGTCAATGTACAGGGCCGCGGAAGGGTCATGGCTAAGGGCGCCg                              >  6:65912/1‑148 (MQ=255)
                                                                                                                     ctgcctgTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGTCAATGTACAGGGCCGCGGAAGGGTCATGGCTAAGGGCGCCGGa                            >  4:132613/1‑148 (MQ=255)
                                                                                                                     ctgcctgTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGTCAATGTACAGGGCCGCGGAAGGGTCATGGCTAAGGGCGCCGGAc                           <  8:160270/149‑1 (MQ=255)
                                                                                                                      tgcctgTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGTCAATGTACAGGGCCGCGGAAGGGTCATGGCTAAGGGCGCCGGa                            >  4:200898/1‑147 (MQ=255)
                                                                                                                           gTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGTCAATGTACAGGGCCGCGGAAGGGTCATGGCTAAGGGCGCCGGACAGGcc                      >  3:22987/1‑148 (MQ=255)
                                                                                                                            ttCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGTCAATGTACAGGGCCGCGGAAGGGTCATGGCTAAGGGCGCCGGACAGGCCaa                    <  4:22987/149‑1 (MQ=255)
                                                                                                                            ttCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGTCAATGTACAGGGCCGCGGAAGGGTCATGGCTAAGGGCGCCGGACAGGCCaa                    <  8:204267/149‑1 (MQ=255)
                                                                                                                            ttCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGTCAATGTACAGGGCCGCGGAAGGGTCATGGCTAAGGGCGCCGGACAGGCCaa                    <  6:40526/149‑1 (MQ=255)
                                                                                                                            ttCCAGGCAGAACTTCGCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGTCAATGTACAGGGCCGCGGAAGGGTCATGGCTAAGGGCGCCGGACAGGcc                      >  6:186343/1‑146 (MQ=255)
                                                                                                                              ccAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGt                                                                       <  6:67466/96‑1 (MQ=255)
                                                                                                                              ccAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGt                                                                       >  5:67466/1‑96 (MQ=255)
                                                                                                                                   cAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGTCAATGTACAGGGCCGCGGAAGGGTCATGGCTAAGGGCGCCGGACAGGCCAAGAATCGt             <  3:132613/149‑1 (MQ=255)
                                                                                                                                    aGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGctc                                                                                                    >  4:188073/1‑61 (MQ=255)
                                                                                                                                    aGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGctc                                                                                                    <  3:188073/61‑1 (MQ=255)
                                                                                                                                    aGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGTCAATGTACAGGGCCGCGGAAGGGTCATGGCTAAGGGCGCCGGACAGGCCAAGAATCGt             >  7:68802/1‑148 (MQ=255)
                                                                                                                                              cgACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGTCAATGTACAGGGCCGCGGAAGGGTCATGGCTAAGGGCGCCGGACAGGCCAAGAATCGTCAATGCCAAgg  >  7:170610‑M2/3‑149 (MQ=255)
                                                                                                                                                |                                                                                                                                                  
GAGTGCACGATCCGGGGCGTACCAATAGCGCTTGGCATAGTGCCACCGCGCCTTGCCGAACAGGCTGATCGGGGCGAACGGGATGGCTACCACGTCGACGTCGGACGGCTTGATGCCTGCCTGTTCCAGGCAGAACTTCGCCGACTCGTAGGGCATGCGGTTCTTCGCATGCTTGTCACGCACGAAGCGCTCTTCTTCGGCGGCGGCAATCAGCTTGCCGTCAATGTACAGGGCCGCGGAAGGGTCATGGCTAAGGGCGCCGGACAGGCCAAGAATCGTCAATGCCAAGG  >  NC_002947/5627214‑5627503

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.