New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 877021 =51 (0.990)4 (0.090) 4/236 NT 7.5% coding (138/999 nt) rsmC 16S rRNA methyltransferase
?NC_002947 877102 = 53 (1.130)coding (57/999 nt) rsmC 16S rRNA methyltransferase

CTTCAGGGGCCTCGACGCCGTAATGGCTGCGGCCTGCGAAGCGGCTTTCGAGCATGGCCTGATCGCCGGCATGCCAGGTCCAGGCCTGGGCCTGAGGCAACTGGCCGAGCAGGTCGTCGGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTGGCGCAGTGTAACAGAGGCGGGCGCCTGGCTCAGCTGACCACGCGGCGTGGCTGCCCGGCGAAGAAG  >  NC_002947/876963‑877249
                                                                                                                                           |                                                                                                                                                   
ctTCAGGGGCCTCGACGCCGTAATGGCTGCGGCCTGCGAAGCGGCTTTCGAGCATGGCCTGATCGCCGGCATGCCAGGTCCAGGCCTGGGCCTGAGGCAACTGGCCGAGCAGGTCGTCGGCGGGGGCGCCGGCGATCAGCAGCGGcccc                                                                                                                                            <  6:227513/149‑1 (MQ=255)
      gggCCTCGACGCCGTAATGGCTGCGGCCTGCGAAGCGGCTTTCGAGCATGGCCTGATCGCCGGCATGCCAGGTCCAGGCCTGGGCCTGAGGCAACTGGCCGAGCAGGTCGTCGGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGaaa                                                                                                                                       >  5:261355/1‑148 (MQ=255)
          cTCGACGCCGTAATGGCTGCGGCCTGCGAAGCGGCTTTCGAGCATGGCCTGATCGCCGGCATGCCAGGTCCAGGCCTGGGCCTGAGGCAACTGGCCGAGCAGGTCGTCGGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGct                                                                                                                                  >  8:91496/1‑149 (MQ=255)
             gtaggcGTAATGGCTGGGGCCTGCGTATGGGCTTTCGTTCATGGCCTGATCGCCGGCATTCCATGTCCCGGCCTGGGGCTGTTGGAACTTGCCGTTGATGTCGGCGGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGctc                                                                                                                                 <  2:61205/142‑1 (MQ=255)
                   gTAATGGCTGCGGCCTGCGAAGCGGCTTTCGAGCATGGCCTGATCGCCGGCATGCCAGGTCCAGGCCTGGGCCTGAGGCAACTGGCCGAGCAGGTCGTCGGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGAc                                                                                                                         >  4:168827/1‑149 (MQ=255)
                          cTGCGGCCTGCGAAGCGGCTTTCGAGCATGGCCTGATCGCCGGCATGCCAGGTCCAGGCCTGGGCCTGAGGCAACTGGCCGAGCAGGTCGTCGGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCaa                                                                                                                  <  4:198840/149‑1 (MQ=255)
                           tGCGGCCTGCGAAGCGGCTTTCGAGCATGGCCTGATCGCCGGCATGCCAGGTCCAGGCCTGGGCCTGAGGCAACTGGCCGAGCAGGTAGTCGGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCaa                                                                                                                  >  2:127627/1‑148 (MQ=255)
                              ggCCTGCGAAGCGGCTTTCGAGCATGGCCTGATCGCCGGCATGCCAGGTCCAGGCCTGGGCCTGAGGCAACTGGCCGAGCAGGTCGTCGGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACt                                                                                                              >  8:99107/1‑149 (MQ=255)
                                  tGCGAAGCGGCTTTCGAGCATGGCCTGATCGCCGGCATGCCAGGTCCAGGCCTGGGCCTGAGGCAACTGGCCGAGCAGGTCGTCGGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCAc                                                                                                          >  1:140621/1‑149 (MQ=255)
                                       aGCGGCTTTCGAGCATGGCCTGATCGCCGGCATGCCAGGTCCAGGCCTGGGCCTGAGGCAACTGGCCGAGCAGGTCGTCGGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTgcgc                                                                                                     <  2:140621/149‑1 (MQ=255)
                                         cGGCTTTCGAGCATGGCCTGATCGCCGGCATGCCAGGTCCAGGCCTGGGCCTGAGGCAACTGGCCGAGCAGGTCGTCGGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCgg                                                                                                   <  8:131262/149‑1 (MQ=255)
                                          ggCTTTCGAGCATGGCCTGATCGCCGGCATGCCAGGTCCAGGCCTGGGCCTGAGGCAACTGGCCGAGCAGGTCGTCGGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCggg                                                                                                  >  5:200908/1‑149 (MQ=255)
                                           gCTTTCGAGCATGGCCTGATCGCCGGCATGCCAGGTCCAGGCCTGGGCCTGAGGCAACTGGCCGAGCAGGTCGTCGGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCaa                                                                                                                  >  8:46437/1‑132 (MQ=255)
                                           gCTTTCGAGCATGGCCTGATCGCCGGCATGCCAGGTCCAGGCCTGGGCCTGAGGCAACTGGCCGAGCAGGTCGTCGGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCaa                                                                                                                  <  7:46437/132‑1 (MQ=255)
                                           gCTTTCGAGCATGGCCTGATCGCCGGCATGCCAGGTCCAGGCCTGGGCCTGAGGCAACTGGCCGAGCAGGTCGTCGGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCa                                                                                                           >  2:300187/1‑139 (MQ=255)
                                           gCTTTCGAGCATGGCCTGATCGCCGGCATGCCAGGTCCAGGCCTGGGCCTGAGGCAACTGGCCGAGCAGGTCGTCGGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCa                                                                                                           <  1:300187/139‑1 (MQ=255)
                                           gCTTTCGAGCATGGCCTGATCGCCGGCATGCCAGGTCCAGGCCTGGGCCTGAGGCAACTGGCCGAGCAGGTCGTCGGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCgg                                                                                                   >  6:66194/1‑147 (MQ=255)
                                           gCTTTCGAGCATGGCCTGATCGCCGGCATGCCAGGTCCAGGCCTGGGCCTGAGGCAACTGGCCGAGCAGGTCGTCGGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCgg                                                                                                   <  5:66194/147‑1 (MQ=255)
                                                cGAGCATGGCCTGATCGCCGGCATGCCAGGTCCAGGCCTGGGCCTGAGGCAACTGGCCGAGCAGGTCGTCGGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCAt                                                                                             <  6:200908/148‑1 (MQ=255)
                                                cGAGCATGGCCTGATCGCCGGCATGCCAGGTCCAGGCCTGGGCCTGAGGCAACTGGCCGAGCAGGTCGTCGGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATg                                                                                            >  3:267745/1‑149 (MQ=255)
                                                 gAGCATGGCCTGATCGCCGGCATGCCAGGTCCAGGCCTGGGCCTGAGGCAACTGGCCGAGCAGGTCGTCGGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATgg                                                                                           <  7:91496/149‑1 (MQ=255)
                                                      tGGCCTGATCGCCGGCATGCCAGGTCCAGGCCTGGGCCTGAGGCAACTGGCCGAGCAGGTCGTCGGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGgacgac                                                                                      <  4:267745/149‑1 (MQ=255)
                                                       ggCCTGATCGCCGGCATGCCAGGTCCAGGCCTGGGCCTGAGGCAACTGGCCGAGCAGGTCGTCGGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGacgacg                                                                                     >  7:109110/1‑149 (MQ=255)
                                                        gCCTGATCGCCGGCATGCCAGGTCCAGGCCTGGGCCTGAGGCAACTGGCCGAGCAGGTCGTCGGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGt                                                                                    <  6:261355/149‑1 (MQ=255)
                                                              tcgccggcgcccccgccgacgacctgctcggccagttgcctcaggcccaggcctggacctggcatgccggcgatcagCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTg                                                                              >  5:203738‑M2/78‑149 (MQ=255)
                                                                  CGGCATGCCAGGTCCAGGCCTGGGCCTGAGGCAACTGGCCGAGCAGGTCGTCGGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGaa                                                                           <  3:24356‑M1/148‑1 (MQ=255)
                                                                    gcgcccccgccgacgacctgctcggccagttgcctcaggcccaggcctggacctggcatgccggcgatcagCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGaaaa                                                                         >  4:70140‑M2/72‑148 (MQ=255)
                                                                      aTGCCAGGTCCAGGCCTGGGCCTGAGGCAACTGGCCGAGCAGGTCGTCGGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAg                                                                      <  4:24356/149‑1 (MQ=255)
                                                                      aTGCCAGGTCCAGGCCTGGGCCTGAGGCAACTGGACGAGCAGGTCGTCGGCGGGGGCGCCGGCTATCAGAAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTACATGGAAGACGTCTCCAGGAAAAAAg                                                                      >  6:117974/1‑149 (MQ=255)
                                                                         ccAGGTCCAGGCCTGGGCCTGAGGCAACTGGCCGAGCAGGTCGTCGGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTgg                                                                   >  6:288123/1‑149 (MQ=255)
                                                                         ccAGGTCCAGGCCTGGGCCTGAGGCAACTGGCCGAGCAGGTCGTCGGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTgg                                                                   <  1:127627/149‑1 (MQ=255)
                                                                           aGGTCCAGGCCTGGGCCTGAGGCAACTGGCCGAGCAGGTCGTCGGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCACGGACGACGTCTCCTGGAAAAAAGTGgcg                                                                 >  8:157971/1‑149 (MQ=255)
                                                                            gcctcaggcccaggccTGAGGCAACTGGCCGAGCAGGTCGTCGGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTGgcg                                                                 >  8:95685/5‑148 (MQ=255)
                                                                                cAGGCCTGGGCCTGAGGCAACTGGCCGAGCAGGTCGTCGGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTGGCGCAgt                                                             <  4:242641/148‑1 (MQ=255)
                                                                                cAGGCCTGGGCCTGAGGCAACTGGCCGAGCAGGTCGTCGGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTGGCGCAgt                                                             >  3:242641/1‑148 (MQ=255)
                                                                                  ggcctgggcctgAGGCAACTGGCCGAGCAGGTCGTCGGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAg                                                                      <  8:17439/137‑1 (MQ=255)
                                                                                    cctgggcctgAGGCAACTGGCCGAGCAGGTCGTCGGCGGGGGGGTCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCTGGTCCATGGACGACGTCTCCTGGAAAAAAGTGGCGCAGTGTaa                                                         <  3:70535/148‑1 (MQ=255)
                                                                                         gcctgAGGCAACTGGCCGAGCAGGTCGTCGGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTGGCGCAGTGTAACAGAgg                                                   >  4:311732/1‑149 (MQ=255)
                                                                                          cctgAGGCAACTGGCCGAGCAGGTCGTCGGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTGGCGCAGTGTAACAGAggc                                                  >  7:135511/1‑149 (MQ=255)
                                                                                           ctgAGGCAACTGGCCGAGCAGGTCGTCGGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTGGCGCAGTGTAACAGAggcg                                                 >  1:290365/1‑149 (MQ=255)
                                                                                              cagttgcctcaggcccaggcctggacctggcatgccggcgatcagCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTGGCGCAGTGTATCAGAggcgggc                                              <  3:70140‑M2/104‑1 (MQ=255)
                                                                                                  aaCTGGCCGAGCAGGTCGTCGGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTg                                                                    <  3:158270/123‑1 (MQ=255)
                                                                                                  aaCTGGCCGAGCAGGTCGTCGGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTg                                                                    >  4:158270/1‑123 (MQ=255)
                                                                                                   aCTGGCCGAGCAGGTCGTCGGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTGGCGCAGTGTAACAGAGGCGGGCGCCTg                                         <  3:311732/149‑1 (MQ=255)
                                                                                                    cctcaggcccaggcctggacctggcatgccggcgatcagCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTGGCGCAGTGTAACAGAGGCGGGCGCCTgg                                        <  6:203738‑M2/110‑1 (MQ=255)
                                                                                                    cTGGCCGTGGAGGTCGTCGGGGGGGGGGGCGGCGATCATCATCGGCCCCTGAAACATCTCTTCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTGGCGCAGTGTAACAGAGGCGGGCGCCTgg                                        <  2:98606/149‑1 (MQ=255)
                                                                                                    cTGGCCGAGCAGGTCGTCGGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTGGCGCAGTGTAACAGAGGCGGGCGCCTgg                                        <  3:162876/149‑1 (MQ=255)
                                                                                                    cTGGCCGAGCAGGTCGTCGGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTGGCGCAGTGTAACAGAGGCGGGCGCCTgg                                        >  6:240068/1‑149 (MQ=255)
                                                                                                         cGAGCAGGTCGTCGGCGGGGGCGCCGGCGAACAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTGGCGCAGTGTAACAGAGGCGGGCGCCTGGCTCAg                                   <  3:80179/149‑1 (MQ=255)
                                                                                                                gtcgtcGGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCt                                                                               >  8:54578/1‑98 (MQ=255)
                                                                                                                gtcgtcGGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCt                                                                               <  7:54578/98‑1 (MQ=255)
                                                                                                                gtcgtcGGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTGGCGCAGTGTAACAGAGGCGGGCGCCTGGCTCAGCTGACCa                            >  8:209208/1‑149 (MQ=255)
                                                                                                                gtcgtcGGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTGGCGCAGTGTAACAGAGGCGGGCGCCTGGCTCAGCTGACCa                            >  2:80369/1‑149 (MQ=255)
                                                                                                                   gtcgGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTGGCGCAGTGTAACAGAGGCGGGCGCCTGGCTCAGCTGACCAcgc                         >  7:26009/1‑149 (MQ=255)
                                                                                                                    tcgGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTGGCGCAGTGTAACAGAggcggg                                               <  6:69262/126‑1 (MQ=255)
                                                                                                                    tcgGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTGGCGCAGTGTAACAGAggcggg                                               >  5:69262/1‑126 (MQ=255)
                                                                                                                        cggGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTGGCGCAGTGTAACAGAGGCGGGCGCCTGGCTCAGCTGACCACGCGGCGt                    <  7:95685/149‑1 (MQ=255)
                                                                                                                        cggGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTGGCGCAGTGTAACAGAGGCGGGCGCCTGGCTCAGCTGACCACGCGGCGt                    <  7:209208/149‑1 (MQ=255)
                                                                                                                         gcccccgcCGACGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTGGCGCAGTGTAACAGAGGCGGGCGCCTGGCTCAGCTGACCACGCGGCGTg                   <  6:86687/144‑1 (MQ=255)
                                                                                                                          ggggCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTGGCGCAGTGTAACAGAGGCGGGCGCCTGGCTCAGCTGACCACGCGGCGTgg                  <  8:26009/149‑1 (MQ=255)
                                                                                                                           gggCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTGGCGCAGTGTAACAGAGGCGGGCGCCTGGCTCAGCTGACCACGCGGCGTGGc                 >  4:158272/1‑149 (MQ=255)
                                                                                                                                 cggcgatcagCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTGGCGCAGTGTAACAGAGGCGGGCGCCTGGCTCAGCTGACCACGCGGCGTGGCTGCCCg           >  6:72974‑M2/11‑149 (MQ=255)
                                                                                                                                     gatcagCAGCGGCCCCGGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTGGCGCAGTGTAACAGAGGCGGGCGCCTGGCTCAGCTGACCACGCGGCGTGGCTGCCCGGCga       <  8:109110‑M2/143‑1 (MQ=255)
                                                                                                                                          gCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTGGCGCAGTGTAACAGAGGCGGGCGCCTGGCTCAGCTGACCACGCGGCGTGGCTGCCCGGCGaagaag  <  3:168827‑M2/148‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                                   
CTTCAGGGGCCTCGACGCCGTAATGGCTGCGGCCTGCGAAGCGGCTTTCGAGCATGGCCTGATCGCCGGCATGCCAGGTCCAGGCCTGGGCCTGAGGCAACTGGCCGAGCAGGTCGTCGGCGGGGGCGCCGGCGATCAGCAGCGGCCCCTGAAACAGCTCTGCCTGACGGAGCAACACTTCACTGCGCGGGTCCATGGACGACGTCTCCTGGAAAAAAGTGGCGCAGTGTAACAGAGGCGGGCGCCTGGCTCAGCTGACCACGCGGCGTGGCTGCCCGGCGAAGAAG  >  NC_002947/876963‑877249

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.