| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1410031 = | 48 (0.930) | 5 (0.100) | 4/250 | NT | 10.6% | coding (701/1059 nt) | nadA | quinolinate synthase iron‑sulfur cluster subunit |
| ? | NC_002947 | 1410076 = | 38 (0.770) | coding (746/1059 nt) | nadA | quinolinate synthase iron‑sulfur cluster subunit | |||||
GCATCGTTCACGAAGAGTTCAAGTCGCGCCAGTTGGCTGACATGAAGGCGCTGTACCCGGATGCTGCGATCCTGGTGCACCCCGAGTCGCCGGAAGCG‑GTGATCGAGCTGGCCGACGCGGTGGGCTCCACCAGCCAGCTGATCAAGGCTGCCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCACCGACCGCGGCATCTTCTACAAGATGCAGCAGTTGTGCCCGGACAAGGAATTCGTCGAAGCCCCCACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCGCATTGC > NC_002947/1409932‑1410224 | gCATCGTTCACGAAGAGTTCAAGTCGCGCCAGTTGGCTGACATGAAGGCGCTGTACCCGGATGCTGCGATCCTGGTGCACCCCGAGTCGCCGGAAGCG‑GTGATCGAGCTGGCCGACGCGGTGGGCTCCACCAGCCAGCTGATCAAGGCt > 6:22565/1‑149 (MQ=255) cgacgaattccttgtccgggcacaactgctgcatcttgtagaagatgccgcggtcggtggcgacgatgaaggttttgttcggcagggtctgggcagcctTGATCGAGCTGGCCGACGCGGTGGGCTCCACCAGCCAGCTGATCAAgg > 4:249956‑M1/100‑147 (MQ=255) tCGTTCACGAAGAGTTCAAGTCGCGCCAGTTGGCTGACATGAAGGCACTGTACCCGGATGCTGCGATCCTGGTGCACCCCGAGTCGCCGGAAGCG‑GTGATCGAGCTGGCCGACGCGGTGGGCTCCACCAGCCAGCTGATCAAGGCTGcc < 6:209293/149‑1 (MQ=255) gTTCACGAAGAGTTCAAGTCGCGCCACTTGGCTGACATGAAGGCGCTGTACCCGGATGCTGCGATCCTGGTGCACCCCGAGTCGCCGGAAGCGCGTGATCGAGCTGGCCGACGCGGTGGGCTCCACCAGCCAGCTGATCAAGGCTGcc < 1:86375/148‑1 (MQ=255) tCACGAAGAGTTCAAGTCGCGCCAGTTGGCTGACATGAAGGCGCTGTACCCGGATGCTGCGATCCTGGTGCACCCCGAGTCGCCGGAAGCG‑GTGATCGAGCTGGCCGACGCGGTGGGCTCCACCAGCCAGCTGATCAAGGCTGCCCAGa > 1:154980/1‑149 (MQ=255) ttccttgtccgggcacaactgctgcatcttgtagaagatgccgcggtcggtggcgacgatgaaggttttgttcggcagggtctgggcagcctTGATCGAGCTGGCCGACGCGGTGGGCTCCACCAGCCAGCTGATCAAgg < 1:112606‑M1/48‑1 (MQ=255) ttccttgtccgggcacaactgctgcatcttgtagaagatgccgcggtcggtggcgacgatgaaggttttgttcggcagggtctgggcagcctTGATCGAGCTGGCCGACGCGGTGGGCTCCACCAGCCAGCTGATCAAgg > 2:112606‑M1/93‑140 (MQ=255) aCGAAGAGTTCAAGTCGCGCCAGTTGGCTGACATGAAGGCGCTGTACCCGGATGCTGCGATCCTGGTGCACCCCGAGTCGCCGGAAGCG‑GTGATCGAGCTGGCCGACGCGGTGGGCTCCACCAGCCAGCTGATCAAGGCTGCCCAGAc < 6:60942/148‑1 (MQ=255) ttCAAGTCGCGCCAGTTGGCTGACATGAAGGCGCTGTACCCGGATGCTGCGATCCTGGTGCACCCCGAGTCGCCGGAAGCG‑GTGATCGAGCTGGCCGACGCGGTGGGCTCCACCAGCCAGCTGATCAAg < 5:85982/129‑1 (MQ=255) ttCAAGTCGCGCCAGTTGGCTGACATGAAGGCGCTGTACCCGGATGCTGCGATCCTGGTGCACCCCGAGTCGCCGGAAGCG‑GTGATCGAGCTGGCCGACGCGGTGGGCTCCACCAGCCAGCTGATCAAg > 6:85982/1‑129 (MQ=255) ttCAAGTCGCGCCAGTTGGCTGACATGAAGGCGCTGTACCCGGATGCTGCGATCCTGGTGCACCCCGAGTCGCCGGAAGCG‑GTGATCGAGCTGGCCGACGCGGTGGGCTCCACCAGCCAGCTGATCAAGGCTGCCCAGACCCTGCCGaa > 2:232220/1‑149 (MQ=255) cAAGTCGCGCCAGTTGGCTGACATGAAGGCGCTGTACCCGGATGCTGCGATCCTGGTGCACCCCGAGTCGCCGGAAGCG‑GTGATCGAGCTGGCCGACGCGGTGGGCTCCACCAGCCAGCTGATCAAGGCTGCCCAGACCCTGCCGAAc > 3:125115/1‑148 (MQ=255) gTCGCGCCAGTTGGCTGACATGAAGGCGCTGTACCCGGATGCTGCGATCCTGGTGCACCCCGAGTCGCCGGAAGCG‑GTGATCGAGCTGGCCGACGCGGTGGGCTCCACCAGCCAGCTGATCAAGGCTGCCCAGACCCTGCCGAACaaaa > 2:36200/1‑149 (MQ=255) tCGCGCCAGTTGGCTGACATGAAGGCGCTGTACCCGGATGCTGCGATCCTGGTGCACCCCGAGTCGCCGGAAGCG‑GTGATCGAGCTGGCCGACGCGGTGGGCTCCACCAGCCAGCTGATCAAGGCTGCCCAGACCCTGCCGAACAAAAc < 5:22565/149‑1 (MQ=255) cgcCAGTTGGCTGACATGAAGGCGCTGTACCCGGATGCTGCGATCCTGGTGCACCCCGAGTCGCCGGAAGCG‑GTGATCGAGCTGGCCGACGCGGTGGGCTCCACCAGCCAGCTGATCAAGGCTGCCCAGACCCTGCCGAACAAAACCtt > 6:137713/1‑149 (MQ=255) cgcCAGTTGGCTGACATGAAGGCGCTGTACCCGGATGCTGCGATCCTGGTGCACCCCGAGTCGCCGGAAGCG‑GTGATCGAGCTGGCCGACGCGGTGGGCTCCACCAGCCAGCTGATCAAGGCTGCCCAGACCCTGCCGAACAAAACCtt < 7:130630/149‑1 (MQ=255) aCATGAAGGCGCTGTACCCGGATGCTGCGATCCTGGTGCACCCCGAGTCGCCGGAAGCG‑GTGATCGAGCTGGCCGACGCGGTGGGCTCCACCAGCCAGCTGATCAAGGCTGCCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCacc > 5:69607/1‑149 (MQ=255) gcgcTGTACCCGGATGCTGCGATCCTGGTGCACCCCGAGTCGCCGGAAGCG‑GTGATCGAGCTGGCCGACGCGGTGGGCTCCACCAGCCAGCTGATCAAGGCTGGCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCACCGACCGCgg < 1:232220/149‑1 (MQ=255) gcgcTGTACCCGGATGCTGCGATCCTGGTGCACCCCGAGTCGCCGGAAGCG‑GTGATCGAGCTGGCCGACGCGGTGGGCTCCACCAGCCAGCTGATCAAGGCTGCCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCACCGACCGCgg < 5:137713/149‑1 (MQ=255) cgcTGTACCCGGATGCTGCGATCCTGGTGCACCCCGAGTCGCCGGAAGCG‑GTGATCGAGCTGGCCGACGCGGTGGGCTCCACCAGCCAGCTGATCAAGGCTACCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCACCGACCGCGGc < 2:294434/149‑1 (MQ=255) gcTGTACCCGGATGCTGCGATCCTGGTGCACCCCGAGTCGCCGGAAGCG‑GTGATCGAGCTGGCCGACGCGGTGGGCTCCACCAGCCAGCTGATCAAGGCTGCCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCACCGACCGCGGCa > 3:83613/1‑149 (MQ=255) aCCCGGATGCTGCGATCCTGGTGCACCCCGAGTCGCCGGAAGCG‑GTGATCGAGCTGGCCGACGCGGTGGGCTCCACCAGCCAGCTGATCAAGGCTGCCCAGACCCTGCCGAACAAAACCTTc < 1:172786/122‑1 (MQ=255) aCCCGGATGCTGCGATCCTGGTGCACCCCGAGTCGCCGGAAGCG‑GTGATCGAGCTGGCCGACGCGGTGGGCTCCACAAGCCAGCTGATCAAGGCTGCCCAGACCCTGCCGAACAAAACCTTc > 2:172786/1‑122 (MQ=255) tgcGATCCTGGTGCACCCCGAGTCGCCGGAAGCG‑GTGATCGAGCTGGCCGACGCGGTGGGCTCCACCAGCCAGCTGATCAAGGCTGCCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCACCGACCGCGGCATCTTCTACAAGATg > 3:10166/1‑148 (MQ=255) cGATCCTGGTGCACCCCGAGTCGCCGGAAGCG‑GTGATCGAGCTGGCCGACGCGGTGGGCTCCACCAGCCAGCTGATCAAGGCTGCCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCACCGACCGCGGCATCTTCTACAAGATgc < 2:154980/147‑1 (MQ=255) gATCCTGGTGCACCCCGAGTCGCCGGAAGCG‑GTGATCGAGCTGGCCGACGCGGTGGGCTCCACCAGCCAGCTGATCAAGGCTGCCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCACCGACCGCGGCATCTTCTACAAGATgcag > 3:237222/1‑148 (MQ=255) tCCTGGTGCACCCCGAGTCGCCGGAAGCG‑GTGATCGAGCTGGCCGACGCGGTGGGCTCCACCAGCCAGCTGATCAAGGCTGCCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCACCGACCGCGGCATCTTCTACAAGATGcagcag > 8:245697/1‑149 (MQ=255) tGGTGCACCCCGAGTCGCCGGAAGCG‑GTGATCGAGCTGGCCGACGCGGTGGGCTCCACCAGCCAGCTGATCAAGGCTGCCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCACCGACCGCGGCATCTTCTACAAGATGCAGCAGTtg > 1:252418/1‑149 (MQ=255) ccccGAGTCGCCGGAAGCG‑GTGATCGAGCTGGCCGACGCGGTGGGCTCCACCAGCCAGCTGATCAAGGCTGCCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCACCGACCGCGGCATCTTCTACAAGATGCAGCAGTTGTGCCCgg < 2:252418/149‑1 (MQ=255) ccGAGTCGCCGGAAGCG‑GTGATCGAGCTGGCCGACGCGGTGGGCTCCACCAGCCAGCTGATCAAGGCTGCCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCACCGACCGCGGCATCTTCTACAAGATGCAGCAGTTGTGCCCGGa > 3:291404/1‑148 (MQ=255) tCGCCGGAAGCG‑GTGATCGAGCTGGCCGACGCGGTGGGCTCCACCAGCCAGCTGATCAAGGCTGCCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCACCGACCGCGGCATCTTCTACAAGATGCAGCAGTTGTGCCCGGACAAgg > 3:54532/1‑148 (MQ=255) ccGGAAGCG‑GTGATCGAGCTGGCCGACGCGGTGGGCTCCACCAGCCAGCTGATCAAGGCTGCCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCACCGACCGCGGCATCTTCTACAAGATGCAGCAGTTGTGCCCGGACAAGGAAtt > 2:203247/1‑149 (MQ=255) cGGAAGCG‑GTGATCGAGCTGGCCGACGCGGTGGGCTCCACCAGCCAGCTGATCAAGGCTGCCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCACCGACCGCGGCATCTTCTACAAGATGCAGCAGTTGTGCCCGGACAAGGAATtc < 1:36200/149‑1 (MQ=255) aaGCG‑GTGATCGAGCTGGCCGACGCGGTGGGCTCCACCAGCCAGCTGATCAAGGCTGCCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCACCGACCGCGGCATCTTCTACAAGATGCAGCAGTTGTGCCCGGACAAGGAATtcgtc < 8:182858/149‑1 (MQ=255) cG‑GTGATCGAGCTGGCCGACGCGGTGGGCTCCACCAGCCAGCTGATCAAGGCTGCCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCACCGACCGCGGCATCTTCTACAAGATGCAGCAGTTGTGCCCGGACAAGGAATtcgtcg > 5:239578/1‑147 (MQ=255) ccttgatcagctggctggtggagcccaccgcgtcggccagctcgatcaAGGCTGCCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCACCGACCGCGGCATCTTCTACAAGATGCAGCAGTTGTGCCCGGACAAGGaa < 1:112606‑M2/92‑1 (MQ=255) ccttgatcagctggctggtggagcccaccgcgtcggccagctcgatcaAGGCTGCCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCACCGACCGCGGCATCTTCTACAAGATGCAGCAGTTGTGCCCGGACAAGGaa > 2:112606‑M2/49‑140 (MQ=255) ccttgatcagctggctggtggagcccaccgcgtcggccagctcgatcaAGGCTGCCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCACCGACCGCGGCATCTTCTACAAGATGCAGCAGTTGTGCCCGGACAAGGAATtcgtcg > 4:249956‑M2/49‑147 (MQ=255) gTGATCGAGCTGGCCGACGCGGTGGGCTCCACCAGCCAGCTGATCAAGGCTGCCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCACCGACCGCGGCATCTTCTACAAGATGCAGCAGTTGTGCCCGGACAAGGAATTCGTCGAAGc > 2:312805/1‑149 (MQ=255) GATCGAGCTGGCCGACGCGGTGGGCTCCACCAGCCAGCTGATCAAGGCTGCCCAGACACTGCCGAACAAAACCTTCATCGTCGCCACCGACCGCGGCATCTTCTACAAGATGCAGCAGTTGTGCCCGGACAAGGAATTCGTCGAAGccc < 4:221231‑M1/149‑1 (MQ=255) atcagctggctggtggagcccaccgcgtcggccagctcgatcaAGGCTGCCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCACCGACCGCGGCATCTTCTACAAGATGCAGCAGTTGTGCCCg > 8:207608‑M2/44‑126 (MQ=255) atcagctggctggtggagcccaccgcgtcggccagctcgatcaAGGCTGCCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCACCGACCGCGGCATCTTCTACAAGATGCAGCAGTTGTGCCCg < 7:207608‑M2/83‑1 (MQ=255) gCCGACGCGGTGGGCTCCACCAGCCAGCTGATCAAGGCTGCCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCACCGACCGCGGCATCTTCTACAAGATGCAGCAGTTGTGCCCGGACAAGGAATTCGTCGAAGCCCCCAccgccg < 4:237222/148‑1 (MQ=255) gCCGACGCGGTGGGCTCCACCAGCCAGCTGATCAAGGCTGCCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCACCGACCGCGGCATCTTCTACAAGATGCAGCAGTTGTGCCCGGACAAGGAATTCGTCGAAGCCCCCAccgccg < 6:69607/148‑1 (MQ=255) cGACGCGGTGGGCTCCACCAGCCAGCTGATCAAGGCTGCCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCACCGACCGCGGCATCTTCTACAAGATGCAGCAGTTGTGCCCGGACAAGGAATTCGTCGAAGCCCCCACCGCCGGc > 3:10185/1‑148 (MQ=255) cGACGCGGTGGGCTCCACCAGCCAGCTGATCAAGGCTGCCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCACCGACCGCGGCATCTTCTACAAGATGCAGCAGTTGTGCCCGGACAAGGAATTCGTCGAAGCCCCCACCGCCGGc > 5:107672/1‑148 (MQ=255) tGGGCTCCACCAGCCAGCTGATCAAGGCTGCCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCACCGACCGCGGCATCTTCTACAAGATGCAGCAGTTGTGCCCGGACAAGGAATTCGTCGAAGCCCCCACCGCCGGCAACGGcgcg < 2:302516/149‑1 (MQ=255) cTCCACCAGCCAGCTGATCAAGGCTGCCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCACCGACCGCGGCATCTTCTACAAGATGCAGCAGTTGTGCCCGGACAAGGAATTCGTCGAAGCCCCCACCGCCGGCAACGGCGCGGCAt < 1:312805/149‑1 (MQ=255) tCCACCAGCCAGCTGATCAAGGCTGCCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCACCGACCGCGGCATCTTCTACAAGATGCAGCAGTTGTGCCCGGACAAGGAATTCGTCGAAGCCCCCACCGCCGGCAACGGCGCGGCATg > 8:242901/1‑149 (MQ=255) caccaGCCAGCTGATCAAGGCTGCCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCACCGACCGCGGCATCTTCTACAAGATGCAGCAGTTGTGCCCGGACAAGGAATTCGTCGAAGCCCCCACCGCCGGCAACGGCGCGGCATGcc < 4:54532/149‑1 (MQ=255) agcTGATCAAGGCTGCCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCACCGACCGCGGCATCTTCTACAAGATGCAGCAGTTGTGCCCGGACAAGGAATTCGTCGAAGCCCCCACCGCCGGCAACGGCGCGGCATGCCGCAGCtgt > 5:29490/1‑149 (MQ=255) cTGATCAAGGCTGCCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCACCGACCGCGGCATCTTCTACAAGATGCAGCAGTTGTGCCCGGACAAGGAATTCGTCGAAGCCCCCACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTgc < 6:107672/149‑1 (MQ=255) cTGATCAAGGCTGCCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCACCGACCGCGGCATCTTCTACAAGATGCAGCAGTTGTGCCCGGACAAGGAATTCGTCGAAGCCCCCACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTgc > 5:86753/1‑149 (MQ=255) cTGATCAAGGCTGCCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCACCGACCGCGGCATCTTCTACAAGATGCAGCAGTTGTGCCCGGACAAGGAATTCGTCGAAGCCCCCACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTgc < 7:245697/149‑1 (MQ=255) gatcaAGGCTGCCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCACCGACCGCGGCATCTTCTACAAGATGCAGCAGTTGTGCCCGGACAAGGAATTCGTCGAAGCCCCCACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTgc < 3:249956‑M2/142‑1 (MQ=255) atcaAGGCTGCCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCACCGACCGCGGCATCTTCTACAAGATGCAGCAGTTGTGCCCGGACAAGGAATTCGTCGAAGCCCCCACCGCCGGCAACGGCGCGGCATGCCGc > 2:140025‑M2/5‑138 (MQ=255) atcaAGGCTGCCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCACCGACCGCGGCATCTTCTACAAGATGCAGCAGTTGTGCCCGGACAAGGAATTCGTCGAAGCCCCCACCGCCGGCAACGGCGCGGCATGCCGc < 1:140025‑M2/134‑1 (MQ=255) atcaAGGCTGCCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCACCGACCGCGGCATCTTCTACAAGATGCAGCAGTTGTGCCCGGACAAGGAATTCGTCGAAGCCCCCACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCGCa > 5:185863‑M2/5‑149 (MQ=255) aAGGCTGCCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCACCGACCGCGGCATCTTCTACAAGATGCAGCAGTTGTGCCCGGACAAGGAATTCGTCGAAGCCCCCACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCGCAtt < 3:221231‑M2/147‑1 (MQ=255) aGGCTGCCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCACCGACCGCGGCATCTTCTACAAGATGCAGCAGTTGTGCCCGGACAAGGAATTCGTCGAAGCCCCCACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCGCATTGc < 6:86753/149‑1 (MQ=255) | GCATCGTTCACGAAGAGTTCAAGTCGCGCCAGTTGGCTGACATGAAGGCGCTGTACCCGGATGCTGCGATCCTGGTGCACCCCGAGTCGCCGGAAGCG‑GTGATCGAGCTGGCCGACGCGGTGGGCTCCACCAGCCAGCTGATCAAGGCTGCCCAGACCCTGCCGAACAAAACCTTCATCGTCGCCACCGACCGCGGCATCTTCTACAAGATGCAGCAGTTGTGCCCGGACAAGGAATTCGTCGAAGCCCCCACCGCCGGCAACGGCGCGGCATGCCGCAGCTGTGCGCATTGC > NC_002947/1409932‑1410224 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |