New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 141351063 (1.220)7 (0.150) 6/242 NT 10.8% coding (387/474 nt) PP_1235 AhpC/TSA family protein
?NC_002947 = 1413530 57 (1.190)coding (367/474 nt) PP_1235 AhpC/TSA family protein

CTTTGAATGTAATTGGGGCTGCAAGGCAGCCCCATTCAATTTCAAGCCTTGTTCAAGGCTTGGGCGGCCGCCAATACGGCATCCACATGCCCGGGCACTTTCACGCCACGCCATTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTGCCATACAGCTTCTTCAGCTTGATCACGTCGAACAGCTGGCACAGGGCCTCGTCCTTGTCGCTGATCAGCTCGAACGGGAAGCCTTGCTTGGCCTTGAAGTTCTCGTGCGACTTGAT  >  NC_002947/1413382‑1413677
                                                                                                                                                    |                                                                                                                                                   
cTTTGAATGTAATTGGGGCTGCAAGGCAGCCCCATTCAATTTCAAGCCTTGTTCAAGGCTTGGGCGGCCGCCAATACGGCATCCACATGCCCGGGCACTTTCACGCCACGCCATTCCTGGCGCAGCACCCCGTCCTTGTCGATTAGGaa                                                                                                                                                     <  7:240754/149‑1 (MQ=255)
cTTTGAATGTAATTGGGGCTGCAAGGCAGCCCCATTCAATTTCAAGCCTTGTTCAAGGCTTGGGCGGCCGCCAATACGGCATCCACATGCCCGGGCACTTTCACGCCACGCCATTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGaa                                                                                                                                                     <  7:185783/149‑1 (MQ=255)
       tGTAATTGGGGCTGCAAGGCAGCCCCATTCAATTTCAAGCCTTGTTCAAGGCTTGGGCGGCCGCCAATACGGCATCCACATGCCCGGGCACTTTCACGCCACGCCATTCCTGGCGCAGCACCCCGTGCTTGTCGATCAGGATggtgctg                                                                                                                                              <  8:57256‑M2/149‑8 (MQ=255)
       tGTAATTGGGGCTGCAAGGCAGCCCCATTCAATTTCAAGCCTTGTTCAAGGCTTGGGCGGCCGCCAATACGGCATCCACATGCCCGGGCACTTTCACGCCACGCCATTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAggtgctg                                                                                                                                              <  5:56265‑M2/149‑8 (MQ=255)
                  cTGCAAGGCAGCCCCATTCAATTTCAAGCCTTGTTCAAGGCTTGGGCGGCCGCCAATACGGCATCCACATGCCCGGGCACTTTCACGCCACGCCATTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGcc                                                                                                                                   >  2:190617/1‑149 (MQ=255)
                   tGCAAGGCAGCCCCATTCAATTTCAAGCCTTGTTCAAGGCTTGGGCGGCCGCCAATACGGCATCCACATGCCCGGGCACTTTCACGCCACGCCATTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGcc                                                                                                                                   >  8:231107/1‑148 (MQ=255)
                    gCAAGGCAGCCCCATTCAATTTCAAGCCTTGTTCAAGGCTTGGGCGGCCGCCAATACGGCATCCACATGCCCGGGCACTTTCACGCCACGCCATTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCa                                                                                                                                 >  1:108303/1‑149 (MQ=255)
                      aaGGCAGCCCCATTCAATTTCAAGCCTTGTTCAAGGCTTGGGCGGCCGCCAATACGGCATCCACATGCCCGGGCACTTTCACGCCACACCATTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATg                                                                                                                               <  6:238900/149‑1 (MQ=255)
                         gCAGCCCCATTCAATTTCAAGCCTTGTTCAAGGCTTGGGCGGCCGCCAATACGGCATCCACATGCCCGGGCACTTTCACGCCACGCCATTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTAc                                                                                                                            >  6:189484/1‑149 (MQ=255)
                           aGCCCCATTCAATTTCAAGCCTTGTTCAAGGCTTGGGCGGCCGCCAATACGGCATCCACATGCCCGGGCACTTTCACGCCACGCCATTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTc                                                                                                                          <  3:142994/149‑1 (MQ=255)
                               ccATTCAATTTCAAGCCTTGTTCAAGGCTTGGGCGGCCGCCAATACGGCATCCACATGCCCGGGCACTTTCACGCCACGCCATTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTg                                                                                                                      >  1:299902/1‑149 (MQ=255)
                               ccATTCAATTTCAAGCCTTGTTCAAGGCTTGGGCGGCCGCCAATACGGCATCCACATGCCCGGGCACTTTCACGCCACGCCATTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTg                                                                                                                      >  7:52951/1‑149 (MQ=255)
                               ccATTCAATTACAAGCCTTGTTCAAGGCTTGGGCGGCCGCCAATACGGCATCCACATGCCCGGGCACTTTCACGCCACCCCATTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTg                                                                                                                      >  8:70160/1‑149 (MQ=255)
                                   tCAATTTCAAGCCTTGTTCAAGGCTTGGGCGGCCGCCAATACGGCATCCACATGCCCGGGCACTTTCACGCCACGCCATTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTGCCa                                                                                                                   >  4:87496/1‑148 (MQ=255)
                                     aaTTTCAAGCCTTGTTCAAGGCTTGGGCGGCCGCCAATACGGCATCCACATGCCCGGGCACTTTCACGCCACGCCATTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTGCCATAc                                                                                                                <  4:114557/149‑1 (MQ=255)
                                      aTTTCAAGCCTTGTTCAAGGCTTGGGCGGCCGCCAATACGGCATCCACATGCCCGGGCACTTTCACGCCACGCCATTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTGCCATACa                                                                                                               <  4:259382/149‑1 (MQ=255)
                                      aTTTCAAGCCTTGTTCAAGGCTTGGGCGGCCGCCAATACGGCATCCACATGCCCGGGCACTTTCACGCCACGCCATTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTGCCATACa                                                                                                               <  7:231107/149‑1 (MQ=255)
                                      aTTTCAAGCCTTGTTCAAGGCTTGGGCGGCCGCCAATACGGCATCCACATGCCCGGGCACTTTCACGCCACGCCATTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTGCCATACa                                                                                                               <  5:189484/149‑1 (MQ=255)
                                           aatccTTGTTTAACGGTTTGGCCGCCGGCAAAAAGGCATCCAAAAGCCCGGGCACTTTCACGCCACGCCATTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTGCCATACAGcttc                                                                                                          <  2:36785/146‑1 (MQ=255)
                                           aaGCCTTGTTCAAGGCTTGGGCGGCCGCCAATACGGCATCCACATGCCCGGGCACTTTCACGCCACGCCATTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTGCCATACAGctt                                                                                                           <  8:89167/148‑1 (MQ=255)
                                              ccTTGTTCAAGGCTTGGGCGGCCGCCAATACGGCATCCACATGCCCGGGCACTTTCACGCCACGCCATTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTGCCATACAGCttcttc                                                                                                       <  8:113054/149‑1 (MQ=255)
                                                  gTTCAAGGCTTGGGCGGCCGCCAATACGGCATCCACATGCCCGGGCACTTTCACGCCACGCCATTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTGCCATACAGCTTCTTCAGc                                                                                                    <  5:162495/148‑1 (MQ=255)
                                                      aaGGCTTGGGCGGCCGCCAATACGGCATCCACATGCCCGTGCACTTTCACGCCACGCCATTCCTGTCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTGCCATACAGCTTCTTCAGCTTGAt                                                                                               <  7:299311/149‑1 (MQ=255)
                                                      aaGGCTTGGGCGGCCGCCAATACGGCATCCACATGCCCGGGCACTTTCACGCCACGCCATTCCTGTCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTGCCATACAGCTTCTTCAGCTTGAt                                                                                               <  7:303496/149‑1 (MQ=255)
                                                      aaGGCTTGGGCGGCCGCCAATACGGCATCCACATGCCCGGGCACTTTCACGCCACGCCATTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTGCCATACAGCTTCTTCAGCTTGa                                                                                                >  8:71270/1‑148 (MQ=255)
                                                      aaGGCTTGGGCGGCCGCCAATACGGCATCCACATGCCCGGGCACTTTCACGCCACGCCATTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTGCCATACAGCTTCTTCAGCTTGAt                                                                                               <  1:152043/149‑1 (MQ=255)
                                                              ggcggcCGCCAATACGGCATCCACATGCCCGGGCACTTTCACGCCACGCCATTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTGCCATACAGCTTCTTCAGCTTGATCACGTCg                                                                                        >  8:111817/1‑148 (MQ=255)
                                                                cggcCGCCAATACGGCATCCACATGCCCGGGCACTTTCACGCCACGCCATTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTGCCATACAGCTTCTTCAGCTTGATCACGTCGAAc                                                                                     <  7:111817/149‑1 (MQ=255)
                                                                    cgccAATACGGCATCCACATGCCCGGGCACTTTCACGCCACGCCATTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTGCCATACAGCTTCTTCAGCTTGATCACGTCGAACAGCt                                                                                 <  7:71270/149‑1 (MQ=255)
                                                                       cAATACGGCATCCAAATGCCCGGGCACTTTCACGCCACGCCATTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCACATGTAGTCCTTGCCATACAGCTTCATCAGCTTGATc                                                                                              >  5:265534/1‑133 (MQ=255)
                                                                       cAATACGGCAGCCACATTCCAGGGCACTTTCACTCCACGCCATTCCTGGCGCAGCACCGCGTGCTTGTCGATCATGAATGTGCTGGGGTCAACGCCCATTTACTCCTTGCCATACTGCTTTTTCTGCTTGATc                                                                                              <  6:265534/133‑1 (MQ=255)
                                                                                aTCCACATGCCCGGGCACTTTCACGCCACGCCATTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTGCCATACAGCTTCTTCAGCTTGATCACGTCGAACAGCTGGCACAgg                                                                         >  7:240336/1‑145 (MQ=255)
                                                                                aTCCACATGCCCGGGCACTTTCACGCCACGCCATTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTGCCATACAGCTTCTTCAGCTTGATCACGTCGAACAGCTGGCACAgg                                                                         <  8:240336/145‑1 (MQ=255)
                                                                                aTCCACATGCCCGGGCACTTTCACGCCACGCCATTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTGCCATACAGCTTCTTCAGCTTGATCACGTCGAACAGCTGGCACAGGGCCt                                                                     >  8:170338/1‑149 (MQ=255)
                                                                                 tCCACATGCCCGGGCACTTTCACGCCACGCCATTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTGCCATACAGCTTCTTCAGCTTGATCACGTCGAACAGCTGGCACAGGGCCTc                                                                    <  2:299902/149‑1 (MQ=255)
                                                                                    acaTGCCCGGGCACTTTCACGCCACGCCATTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTGCCATACAGCTTCTTCAGCTTGATCACGTCGAACAGCTGGCACAGGGCCTCGTc                                                                 <  6:56265/149‑1 (MQ=255)
                                                                                    acaTGCCCGGGCACTTTCACGCCACGCCATTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTGCCATACAGCTTCTTCAGCTTGATCACGTCGAACAGCTGGCACAGGGCCTCGTc                                                                 <  3:87496/149‑1 (MQ=255)
                                                                                     caTGCCCGGGCACTTTCACGCCACGCCATTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTGCCATACAGCTTCTTCAGCTTGATCACGTCGAACAGCTGGCACAGGGCCTCGTcc                                                                >  8:211714/1‑149 (MQ=255)
                                                                                     caTGCCCGGGCACTTTCACGCCACGCCATTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTGCCATACAGCTTCTTCAGCTTGATCACGTCGAACAGCTGGCACAGGGCCTCGTcc                                                                >  3:142882/1‑149 (MQ=255)
                                                                                       tGCCCGGGCACTTTCACGCCACGCCATTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACACCTTGCCATACAGCTTCTTCAGCTTGATCACGTCGAACAGCTGGCACAGGGCCTCGTCCtt                                                              <  3:275293/149‑1 (MQ=255)
                                                                                         cccGGGCACTTTCACGCCACGCCATTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTGCCATACAGCTTCTTCAGCTTGATCACGTCGAACAGCTGGCACAGGGCCTCGTCCTTGt                                                            <  8:52951/149‑1 (MQ=255)
                                                                                         cccGGGCACTTTCACGCCACGCCATTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTGCCATACAGCTTCTTCAGCTTGATCACGTCGAACAGCTGGCACAGGGCCTCGTCCTTGt                                                            <  7:170338/149‑1 (MQ=255)
                                                                                             ggCACTTTCACGCCACGCCATTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTGCCATACAGCTTCTTCAGCTTGATCACGTCGAACAGCTGGCACAGGGCCTCGTCCTTGTCGCt                                                        >  5:69807/1‑149 (MQ=255)
                                                                                               cACTTTCACGCCACGCCATTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTGCCATACAGCTTCTTCAGCTTGATCACGTCGAACAGCTGGCACAGGGCCTCGTCCTTGTCGCTGa                                                      <  1:127901/149‑1 (MQ=255)
                                                                                                  tttCACGCCACGCCATTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTGCCATACAGCTTCTTCAGCTTGATCACGTCGAACAGc                                                                                  <  1:117485/118‑1 (MQ=255)
                                                                                                  tttCACGCCACGCCATTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTGCCATACAGCTTCTTCAGCTTGATCACGTCGAACAGc                                                                                  >  2:117485/1‑118 (MQ=255)
                                                                                                      acgccacgccATTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTGCCATACAGCTTCTTCAGCTTGATCACGTCGAACAGCTGGCACAGGGCCTCGTCCTTGTCGCTGATCAGCTc                                               >  4:167585/1‑149 (MQ=255)
                                                                                                        gccacgccaTTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTGCCATACAGCTTCTTCAGCTTGATCACGTCGAACAGCTGGCACAGGGCCTCGTCCTTGTCGCTGATCAGCTCg                                              >  3:164722/1‑148 (MQ=255)
                                                                                                          cacgccaTTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTGCCATACAGCTTCTTCAGCTTGATCACGTCGAACAGCTGGCACAGGGCCTCGTCCTTGTCGCTGATCAGCTCGAAc                                           >  1:45168/1‑149 (MQ=255)
                                                                                                             gccaTTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTGCCATACAGCTTCTTCAGCTTGATCACGTCGAACAGCTGGCACAGGGCCTCGTCCTTGTCGCTGATCAGCTCGAACgg                                         >  1:288634/1‑148 (MQ=255)
                                                                                                               caTTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTGCCATACAGCTTCTTCAGCTTGATCACGTCGAACAGCTGGCACAGGGCCTCGTCCTTGTCGCTGATCAGCTCGAACggg                                        >  5:27922/1‑147 (MQ=255)
                                                                                                               caTTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTGCCATACAGCTTCTTCAGCTTGATCACGTCGAACAGCTGGCACAGGGCCTCGTCCTTGTCGCTGATCAGCTCGAACggg                                        >  4:36712/1‑147 (MQ=255)
                                                                                                               caTTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTGCCATACAGCTTCTTCAGCTTGATCACGTCGAACAGCTGGCACAGGGCCTCGTCCTTGTCGCTGATCAGCTCGAACGGGaa                                      <  1:190617/149‑1 (MQ=255)
                                                                                                                 ttCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTGCCATACAGCTTCTTCAGCTTGATCACGTCGAACAGCTGGCACAGGGCCTCGTCCTTGTCGCTGATCAGCTCGAACGGGAAGc                                    <  4:142882/149‑1 (MQ=255)
                                                                                                                    cTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGACAACGCCCATGTACTCCTTGCCATACAGCTTCTTCAGCTTGATCACGTCGAACAGCTGGCACAGGGCCTCGTCCTTGTCGCTGATCAGCTCGAACGGGAAGCctt                                 >  1:64556/1‑149 (MQ=255)
                                                                                                                      ggCGCAGCACCCCGTCCTTGTCGATCAGGAAggtgctgcgccaggaatggcgtggcgtgaaagtgcccgggcatgtggatgccgtattggcggccgcccaagccttga                                                                        <  7:150813‑M2/108‑78 (MQ=255)
                                                                                                                      ggCGCAGCACCCCGTCCTTGTCGATCAGGAAggtgctgcgccaggaatggcgtggcgtgaaagtgcccgggcatgtggatgccgtattggcggccgcccaagccttga                                                                        >  8:150813‑M2/1‑31 (MQ=255)
                                                                                                                       gcgcAGCACCCCGTCCTTGTCGATCAGGAAggtgctgcgccaggaatggcgtggcgtgaaagtgcccgggcatgtggatgccgtattggcggccgcccaagccttgaacaaggcttgaaattgaatggggctgccttgcagccccaatt                              >  1:156259‑M2/1‑30 (MQ=255)
                                                                                                                       gcgcAGCACCCCGTCCTTGTCGATCAGGAAggtgctgcgccaggaatggcgtggcgtgaaagtgcccgggcatgtggatgccgtattggcggccgcccaagccttgaacaaggcttgaaattgaatggggctgccttgcagccccaat                               <  2:156259‑M2/148‑119 (MQ=255)
                                                                                                                       gcgcAGCACCCCGTCCTTGTCGATCAGGAAggtgctgcgccaggaatggcgtggcgtgaaagtgcccgggcatgtggatgccgtattggcggccgcccaagccttgaacaaggcttgaaattgaatggggctgccttgcagccccaat                               <  8:265492‑M2/148‑119 (MQ=255)
                                                                                                                       gcgcAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTGCCATACAGCTTCTTCAGCTTGATCACGTCGAACAGCTGGCACAGGGCCTCGTCCTTGTCGCTGATCAGCTCGAACGGGAAGCct                                  >  5:262879/1‑145 (MQ=255)
                                                                                                                       gcgcAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTGCCATACAGCTTCTTCAGCTTGATCACGTCGAACAGCTGGCACAGGGCCTCGTCCTTGTCGCTGATCAGCTCGAACGGGAAGCct                                  <  6:262879/145‑1 (MQ=255)
                                                                                                                        cgcAGCACCCCGTCCTTGTCGATCAGGAAggtgctgcgccaggaatggcgtggcgtgaaagtgcccgggcatgtggatgccgtattggcggccgcccaagccttgaacaaggcttgaaattgaatggggctgccttgcagccccaatt                              <  3:40123‑M2/148‑120 (MQ=255)
                                                                                                                         gcagcaCCCCGTCCTTGTCGATCAGGAAggtgctgcgccaggaatggcgtggcgtgaaagtgcccgggcatgtggatgccgtattggcggccgcccaagccttgaacaaggcttgaaattgaatggggctgccttgcagccccaatta                             <  4:48044‑M2/148‑121 (MQ=255)
                                                                                                                         gcagcaCCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTGCCATACAGCTTCTTCAGCTTGATCACGTCGAACAGCTGGCACAGGGCCTCGTCCTTGTCGCTGATCAGCTCGAACGGGAAGCcttgcttg                            <  7:211714/149‑1 (MQ=255)
                                                                                                                           agcaCCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTGCCATACAGCTTCTTCAGCTTGATCACGTCGAACAGCTGGCACAGGGCCTCGTCCTTGTCGCTGATCAGCTCGAACGGGAAGCCTTGCTTGGc                          <  4:164722/149‑1 (MQ=255)
                                                                                                                                 ccGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTGCCATACAGCTTCTTCAGCTTGATCACGTCGAACAGCTGGCACAGGGCCTCGTCCTTGTCGCTGATCAGCTCGAACGGGAAGCCTTGCTTGGCCTTGaa                    <  3:167585/149‑1 (MQ=255)
                                                                                                                                         gTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTGCCATACAGCTTCTTCAGCTTGATCACGTCGAACAGCTGGCACAGGGCCTCGTCCTTGTCGCTGATCAGCTCGAACGGGAAGCCTTGCTTGGCCTTGAAGTtctc              <  2:288634/147‑1 (MQ=255)
                                                                                                                                                   aaGGTGCTGCGGTCAACGCCCATGTACTCCTTGCCATACAGCTTCTTCAGCTTGATCACGTCGAACAGCTGGCACAGGGCCTCGTCCTTGTCGCTGATCAGCTCGAACGGGAAGCCTTGCTTGGCCTTGAAGTTCTCGTGCGACTTGAt  <  2:45168/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
CTTTGAATGTAATTGGGGCTGCAAGGCAGCCCCATTCAATTTCAAGCCTTGTTCAAGGCTTGGGCGGCCGCCAATACGGCATCCACATGCCCGGGCACTTTCACGCCACGCCATTCCTGGCGCAGCACCCCGTCCTTGTCGATCAGGAAGGTGCTGCGGTCAACGCCCATGTACTCCTTGCCATACAGCTTCTTCAGCTTGATCACGTCGAACAGCTGGCACAGGGCCTCGTCCTTGTCGCTGATCAGCTCGAACGGGAAGCCTTGCTTGGCCTTGAAGTTCTCGTGCGACTTGAT  >  NC_002947/1413382‑1413677

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.