New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2521628	80 (1.550)	5 (0.100)	5/246	NT	6.2%	coding (2879/4446 nt)	PP_2212	leucine‑rich repeat‑containing protein
	?	NC_002947	= 2521668	76 (1.560)					coding (2919/4446 nt)	PP_2212	leucine‑rich repeat‑containing protein

GCCTGGTAGAACTGCAGGAAGCGCATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACTGCCAGCACTACCGCCGCATATCGATTTCCATCGCATTACCCTGCTGAGCGTGAACGACACCCTGATTACTGAC  >  NC_002947/2521520‑2521806                                                                                                                                                      |                                                                                                                                           gcCTGGTAGAACTGCAGGAAGCGCATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGtt                                                                                                                                            <  4:63765/149‑1 (MQ=255)    tGGTAGAACTGCAGGAAGCGCATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTtcg                                                                                                                                         <  2:87840‑M2/149‑4 (MQ=255)      gTAGAACTGCAGGAAGCGCATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTtcg                                                                                                                                         >  5:196588‑M2/1‑144 (MQ=255)            cTGCAGGAAGCGCATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTcggccggc                                                                                                                                   >  5:58579/1‑147 (MQ=255)            cTGCAGGAAGCGCATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGa                                                                                                                                 <  1:242081/149‑1 (MQ=255)                aGGAAGCGCATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAgggg                                                                                                                             <  2:238496/149‑1 (MQ=255)                  gAAGCGCATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAgg                                                                                                                               >  1:181289/1‑145 (MQ=255)                  gAAGCGCATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAgg                                                                                                                               <  2:181289/145‑1 (MQ=255)                     gcgcATGACCTGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCaaa                                                                                                                         >  7:46082/1‑148 (MQ=255)                     gcgcATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAac                                                                                                                        <  4:105227/149‑1 (MQ=255)                       gcATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAaca                                                                                                                       >  2:63053/1‑148 (MQ=255)                        cATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAaca                                                                                                                       >  8:305986/1‑147 (MQ=255)                        cATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAaca                                                                                                                       >  5:258671/1‑147 (MQ=255)                        cATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAAcaca                                                                                                                     <  1:63053/149‑1 (MQ=255)                        cATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAAcaca                                                                                                                     <  2:180992/149‑1 (MQ=255)                         aTGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAg                                                                                                                    <  7:108161/149‑1 (MQ=255)                          tGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAgg                                                                                                                   <  4:37149/149‑1 (MQ=255)                            aCCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAgggg                                                                                                                 <  2:285504/149‑1 (MQ=255)                            aCCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAggg                                                                                                                  <  4:135597/148‑1 (MQ=255)                              cAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGGTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGCCAGCATCCTGCGAGCCTGGCGCCTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAgggg                                                                                                                 >  3:239482/1‑147 (MQ=255)                                gCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTcggccgg                                                                                                                                    >  6:21750/1‑126 (MQ=255)                                gCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTcggccgg                                                                                                                                    <  5:21750/126‑1 (MQ=255)                                  tAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAgcgc                                                                                                           <  5:5173/149‑1 (MQ=255)                                          tACCTGAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGAGTGCAGGGC‑GAGCCTGTTTCGGCCGTCGAGGGGCAAACACAGGGGCAGCGCTTGTCGAt                                                                                                   <  1:67465/149‑1 (MQ=255)                                          tACCTCACCCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGAt                                                                                                   <  5:171438/149‑1 (MQ=255)                                          tACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGAt                                                                                                   <  2:3346/149‑1 (MQ=255)                                             cTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGTAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAg                                                                                                >  2:235218/1‑149 (MQ=255)                                             cTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTtcg                                                                                                                                         >  3:49238‑M2/1‑105 (MQ=255)                                             cTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTtcg                                                                                                                                         <  4:49238‑M2/108‑4 (MQ=255)                                             cTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAg                                                                                                <  5:162301/149‑1 (MQ=255)                                             cTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAg                                                                                                >  6:162301/1‑149 (MQ=255)                                              tCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGc                                                                                               >  6:296681/1‑149 (MQ=255)                                               cAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCg                                                                                              >  7:109955/1‑149 (MQ=255)                                                aaCCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCgg                                                                                             >  6:224602/1‑149 (MQ=255)                                                aaCCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCg                                                                                              <  4:118817/148‑1 (MQ=255)                                                 aCCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGt                                                                                            <  8:192561/149‑1 (MQ=255)                                                     cTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGa                                                                                        <  1:121916/149‑1 (MQ=255)                                                           cGGTGCCGCGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGGTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTCTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTgc                                                                                  <  8:258623/149‑1 (MQ=255)                                                             gTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTgcg                                                                                 >  2:321891/1‑148 (MQ=255)                                                              tGCCGAGTTGCAGGAGGGGCTACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTgc                                                                                  <  8:99646/146‑1 (MQ=255)                                                              tGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGca                                                                               >  7:261475/1‑149 (MQ=255)                                                              tGCCGAGTTGCAGGAGGGGCAACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTgc                                                                                  >  7:99646/1‑146 (MQ=255)                                                                 cGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCacac                                                                            <  5:224602/149‑1 (MQ=255)                                                                 cGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCacac                                                                            >  4:46935/1‑149 (MQ=255)                                                                 cGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCacac                                                                            >  8:91707/1‑149 (MQ=255)                                                                     ttGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACTGcc                                                                        >  3:84150/1‑149 (MQ=255)                                                                     ttGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACTGcc                                                                        <  7:305986/149‑1 (MQ=255)                                                                       gCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACTGCCAg                                                                      >  2:159536/1‑149 (MQ=255)                                                                         aggaggGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAACCACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACTGCCAGCa                                                                    <  1:87840/149‑1 (MQ=255)                                                                          ggaggGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACTGCCAGCAc                                                                   >  6:239938/1‑149 (MQ=255)                                                                             ggggCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACTGCCAGCACTAc                                                                >  3:108663/1‑149 (MQ=255)                                                                                     gcgcCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACTGCCAGCACTACCGCCGCa                                                         >  8:297413/1‑148 (MQ=255)                                                                                        ccgcccgcAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACTGCCAGCACTACCGCCGCATATc                                                     <  7:101762/149‑1 (MQ=255)                                                                                         cgcccgcAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACTGCCAGCACTACCGCCGCATATCg                                                    <  8:46082/149‑1 (MQ=255)                                                                                           cccgcAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACt                                                                           <  1:280758/124‑1 (MQ=255)                                                                                           cccgcAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACt                                                                           >  2:280758/1‑124 (MQ=255)                                                                                           cccgcAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACTGCCAGCACTACCGCCGCATATCg                                                    <  8:261475/147‑1 (MQ=255)                                                                                           cccgcAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACTGCCAGCACTACCGCCGCATATCGAt                                                  <  1:159545/149‑1 (MQ=255)                                                                                            ccgcAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAggg                                                                                                                  <  4:297692/84‑1 (MQ=255)                                                                                            ccgcAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAggg                                                                                                                  >  3:297692/1‑84 (MQ=255)                                                                                            ccgcAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACTGCCAGCACTACCGCCGCATATCGAtt                                                 <  4:84150/149‑1 (MQ=255)                                                                                              gcAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACTGCCAGCACTACCGCCGCATATCGATTTc                                               >  8:246496/1‑149 (MQ=255)                                                                                                   ttGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTtcggccgtcaacctgcgtgcggcgcgtcgcccctcctgcaactcggcaccgacccagcggttgaggtacagcactagctggtcatgcgcttcctgcag                                          <  4:78437‑M2/149‑99 (MQ=255)                                                                                                      aCGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTtcggccgtcaacctgcgggcggcgcgtcgcccctcctgcaactcggcaccgacccagcggttgaggtacagcactagctggtcatgc                                                     <  2:280626‑M2/135‑88 (MQ=255)                                                                                                      aCGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTtcggccgtcaacctgcgggcggcgcgtcgcccctcctgcaactcggcaccgacccagcggttgaggtacagcactagctggtcatgc                                                     >  1:280626‑M2/1‑48 (MQ=255)                                                                                                       cGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTtcggccgtcaacctgcgggcggcgcgtcgcccctcctgcaactcggcaccgacccagcggttgaggtacagcactagctggtcatgcgcttcctgcagttct                                      <  6:209504‑M2/149‑103 (MQ=255)                                                                                                         gCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACTGCCAGCACTACCGCCGCATATCGAttt                                                >  1:17512/1‑137 (MQ=255)                                                                                                         gCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACTGCCAGCACTACCGCCGCATATCGAttt                                                <  2:17512/137‑1 (MQ=255)                                                                                                          ccGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACTGCCAGCACTACCGCCGCATATCGATTTCCATCGCATTAcc                                   <  8:109955/149‑1 (MQ=255)                                                                                                             aCAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACTGCCAGCACTACCGCCGCATATCGATTTCCATCGCATTACCctg                                <  7:246496/149‑1 (MQ=255)                                                                                                                 cATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACTGCCAGCACTACCGCCGCATATCGATTTCCATCGCATTACCctgct                              >  2:306350/1‑147 (MQ=255)                                                                                                                 cATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACTGCCAGCACTACCGCCGCATATCGATTTCCATCGCATTACCCTGCTGa                            <  1:2838/149‑1 (MQ=255)                                                                                                                  aTCCTGCGAGCCTGGCGACTGCAGGGCGGAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACTGCCAGCACTACCGCCGCATATCGATTTCCATCGCATTACCctgct                              >  1:187009/1‑147 (MQ=255)                                                                                                                   tCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACTGCCAGCACTACCGCCGCATATCGATTTCCATCGCATTACCCTGCTGAGc                          <  3:46935/149‑1 (MQ=255)                                                                                                                   tCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACTGCCAGCACTACCGCCGCATATCGATTTCCATCGCATTACCCTGCTGAGc                          >  7:5994/1‑149 (MQ=255)                                                                                                                     cTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACTGCCAGCACTACCGCCGCATATCGATTTCCATCGCATTACCCTGCTGAGCGt                        >  5:133202/1‑149 (MQ=255)                                                                                                                        cGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACTGCCAGCACTACCGCCGCATATCGATTTCCATCGCATTACCCTGCTGAGCGTGa                      <  6:258671/148‑1 (MQ=255)                                                                                                                                gCGACTGCAGGGC‑GAGCCTGTTtcggccgtcaacctgcgggcggcgcgtcgcccctcctgcaactcggcaccgacccagcggttgaggtacagcactagctggtcatgcgcttcctgcagttctaccaggcgctcgaagactggctg               >  3:78437‑M2/1‑22 (MQ=255)                                                                                                                                gCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACTGCCAGCACTACCGCCGTATATCGATTTCCATCGCATTACCCTGCTGAGCGTGAACGACAcc              <  1:235218/148‑1 (MQ=255)                                                                                                                                gCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACTGCCAGCACTACCGCCGCATATCGATTTCCATCGCATTACCCTGCTGAGCGTGAACGacac               <  5:239938/147‑1 (MQ=255)                                                                                                                                  gACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACTGCCAGCACTACCGCCGCATATCGATTTCCATCGCATTACCCTGCTGAGCGTGAACGACACCCTg           <  7:91707/149‑1 (MQ=255)                                                                                                                                     tGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACTGCCAGCACTACCGCCGCATATCGATTTCCATCGCATTACCCTGCTGAGCGTGAACGACACCCTGAt         >  2:200659/1‑148 (MQ=255)                                                                                                                                       cAGGGC‑GAGACTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACTGCCAGCACTACCGCCGCATTTCTATTTCCATCGCATTACCCTGCTGAGCGTGAACGACTCCCTGATTa       <  4:108663/148‑1 (MQ=255)                                                                                                                                        aGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACTGCCAGCACTACCGCCGCATATCGATTTCCATCGCATTACCCTGCTGAGCGTGAACGACACCCTGATTACt     <  2:267228/149‑1 (MQ=255)                                                                                                                                          ggC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACTGCCAGCACTACCGCCGCATATCGATTTCCATCGCATTACCCTGCTGAGCGTGAACGACACCCTGATTACTGa   <  1:159536/149‑1 (MQ=255)                                                                                                                                          ggC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACTGCCAGCACTACCGCCGCATATCGATTTCCATCGCATTACCCTGCTGAGCGTGAACGACACCCTGATTACTGa   >  6:308785/1‑149 (MQ=255)                                                                                                                                          ggC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACTGCCAGCACTACCGCCGCATATCGATTTCCATCGCATTACCCTGCTGAGCGTGAACGACACCCTGATTACTGa   <  5:101250/149‑1 (MQ=255)                                                                                                                                           gC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACTGCCAGCACTACCGCCGCATATCGATTTCCATCGCATTACCCTGCTGAGCGTGAACGACACCCTGATTACTGa   >  2:263628/1‑148 (MQ=255)                                                                                                                                              gAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACTGCCAGCACTACCGCCGCATATCGATTTCCATCGCATTACCCTGCTGAGCGTGAACGACACCCTGATTACTGAc  >  6:127518/1‑147 (MQ=255)                                                                                                                                              gAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACTGCCAGCACTACCGCCGCATATCGATTTCCATCGCATTACCCTGCTGAGCGTGAACGACACCCTGATTACTGAc  <  5:127518/147‑1 (MQ=255)                                                                                                                                                     tttCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACTGCCAGCACTACCGCCGCATATCGATTTCCATCGCATTACCCTGCTGAGCGTGaa                     >  3:46143/1‑121 (MQ=255)                                                                                                                                                     tttCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACTGCCAGCACTACCGCCGCATATCGATTTCCATCGCATTACCCTGCTGAGCGTGaa                     <  4:46143/121‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                           GCCTGGTAGAACTGCAGGAAGCGCATGACCAGCTAGTGCTGTACCTCAACCGCTGGGTCGGTGCCGAGTTGCAGGAGGGGCGACGCGCCGCCCGCAGGTTGACGGCCGACAGCATCCTGCGAGCCTGGCGACTGCAGGGC‑GAGCCTGTTTCGGCCGGCGAGGGGCAAACACAGGGGCAGCGCTTGTCGATGAGCGGTTTGAGTTTGCGCACACTGCCAGCACTACCGCCGCATATCGATTTCCATCGCATTACCCTGCTGAGCGTGAACGACACCCTGATTACTGAC  >  NC_002947/2521520‑2521806

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.