New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2936886	46 (0.890)	5 (0.100)	5/244	NT	9.6%	coding (920/1677 nt)	PP_2569	MHS family metabolite MFS transporter
	?	NC_002947	= 2936914	51 (1.050)					coding (948/1677 nt)	PP_2569	MHS family metabolite MFS transporter

GGCAGTTCTACGCGTTGTTCTTCCTGTTGCAGACGCTCAAGATCGAGGCGCAGACCGCCAACCTGCTGATTGCCGGTTCACTGTTGATCGGCACACCATTCTTCATTTTCTTCGGCAGCCTGTCCGACCGGATTGGCCGCAA‑GAAAATCATCATGGCCGGCTGCATCATCGCCGCGCTGACCTACTTCCCGATCTTCAAGGCACTGACCGAGTACGGCAACCCGGATGTATTCGTTGCCCAGGAGCAGAACCCGGTTGTGGTGGTGGCCGACCCGGGCCAATGTGCAT  >  NC_002947/2936775‑2937062                                                                                                                                            |                                                                                                                                                      ggCAGTTCTACGCGTTGTTCTTCCTGTTGCAGACGCTCAAGATCGAGGCGCAGACCGCCAACCTGCTGATTGCCGGTTCACTGTTGATCGGCACACCATTCTTCATTTTCTTCGGCAGCCTGTCCGACCGGATTGGCCGCAA‑GAAAatc                                                                                                                                             <  8:192589/149‑1 (MQ=255)            gcgTTGTTCTTCCTGTTGCAGCAGCTCAAGATCGAGGCGCAGACCGCAAACCTGCTGATTGCCGGTTAACTGTTGATCGGCACACCATTCTTCATTTTCTTCGGCAGCCTGGACGACCGGATTGGCCGCAA‑GAAAATCATCCTGGCCgg                                                                                                                                  >  6:194485/1‑149 (MQ=255)              gtggttCTTCCTGGTTCAGACGCTCAAGATCGAGGCGCAGACCGCCAACCTGCTGATTGCCGGTTCACTGTTGATCGGCACACCATTCTTCATTTTCTTCTGCAGCCTGTCCGACCGGATTGGCCGCAA‑GAAAATCATCATGGCCGGCt                                                                                                                                <  6:18406/146‑1 (MQ=255)                  ttcttcCTGTTGCAGACGCTCAAGATCGAGGCGCAGACCGCCAACCTGCTGATTGCCGGTTCACTGTTGATCGGCACACCATTCTTCATTTTCTTCGGCAGCCTGTCCGACCGGATTGGCCGCAA‑GAAAATCATCATGGCCGGCTGcat                                                                                                                            >  7:130268/1‑149 (MQ=255)                       ccTGTTGCAGACGCTCAAGATCGAGGCGCAGACCGCCAACCTGCTGATTGCCGGTTCACTGTTGATCGGCACACCATTCTTCATTTTCTTCGGCAGCCTGTCCGACCGGATTGGCCGCAA‑GAAAATCATCATGGCCGGCTGCatcatc                                                                                                                        <  8:242891/148‑1 (MQ=255)                        cTGTTGCAGACGCTCAAGATCGAGGCGCAGACCGCCAACCTGCTGATTGCCGGTTCACTGTTGATCGGCACACCATTCTTCATTTTCTTCGGCAGCCTGTCCGACCGGATTGGCCGCAA‑GAAAATCATCATGGCCGGCTGCATCATcg                                                                                                                       <  2:199115/148‑1 (MQ=255)                         tGTTGCAGACGCTCAAGATCGAGGCGCAGACCGCCAACCTGCTGATTGCCGGTTCACTGTTGATCGGCACACCATTCTTCATTTTCTTCGGCAGCCTGTCCGACCGGATTGGCCGCAA‑GAAAATCATCATGGCCGGCTGCATCATcgcc                                                                                                                     >  4:115383/1‑149 (MQ=255)                             gCAGACGCTCAAGATCGAGGCGCAGACCGCCAACCTGCTGATTGCCGGTTCACTGTTGATCGGCACACCATTCTTCATTTTCTTCGGCAGCCTGTCCGACCGGATTGGCCGCAA‑GAAAATCATCATGGCCGGCTGCATCATCGCCgcgc                                                                                                                 >  2:255860/1‑149 (MQ=255)                                gACGCTCAAGATCGAGGCGCAGACCGCCAACCTGCTGATTGCCGGTTCACTGTTGATCGGCACACCATTCTTCATTTTCTTCGGCAGCCTGTCCGACCGGATTGGCCGCAA‑GAAAATCATCATGGCCGGCTGCATCATCGCCGCGCTGa                                                                                                              <  8:130268/149‑1 (MQ=255)                                     tCAAGATCGAGGCGCAGACCGCCAACCTGCTGATTGCCGGTTCACTGTTGATCGGCACACCATTCTTCATTTTCTTCGGCAGCCTGTCCGACCGGATTGGCCGCAA‑GAAAATCATCATGGCCGGCTGCATCATCGCCGCGCTGACCTAc                                                                                                         >  8:26125/1‑149 (MQ=255)                                     tCAAGATCGAGGCGCAGACCGCCAACCTGCTGATTGCAGGTTCACTGTTGATCGGCACACCATTCTTCATTTACTTCGGCAGCCAGTCCGACCGGATTGGCCGCAA‑GAAAATCATCATGGCCGGCTGCATCATCGCCGCGCTGACCTAc                                                                                                         >  1:168029/1‑149 (MQ=255)                                            cGAGGCGCAGACCGCCAACCTGCTGATTGCCGGTTCACTGTTGATCGGCACACCATTCTTCATTTTCTTCGGCAGCCTGTCCGACCGGATTGGCCGCAA‑GAAAATCATCATGGCCGGCTGCATCATCGCCGCGCTGACCTACTTCCCGa                                                                                                  >  6:61515/1‑149 (MQ=255)                                                 cgcAGACCGCCAACCTGCTGATTGCCGGTTCACTGTTGATCGGCACACCATTCTTCATTTTCTTCGGCAGCCTGTCCGACCGGATTGGCCGCAA‑GAAAATCATCATGGCCGGCTGCATCATCGCCGCGCTGACCTACTTCCCGATCtt                                                                                              >  8:37876/1‑148 (MQ=255)                                                  gcAGACCGCCAACCTGCTGATTGCCGGTTCACTGTTGATCGGCACACCATTCTTCATTTTCTTCGGCAGCCTGTCCGACCGGATTGGCCGCAA‑GAAAATCATCATGGCCGGCTGCATCATCGCCGCGCTGACCTACTTCCCGATCTTc                                                                                             >  2:29400/1‑148 (MQ=255)                                                   cAGACCGCCAACCTGCTGATTGCCGGTTCACTGTTGATCGGCACACCATTCTTCATTTTCTTCGGCAGCCTGTCCGACCGGATTGGCCGCAATCAAAATCATCATGGCCGGCTGCATCATCGCCGCGCTGACCTACTTCCCGATCTTCa                                                                                            <  1:255860/149‑1 (MQ=255)                                                   cAGACCGCCAACCTGCTGATTGCCGGTTCACTGTTGATCGGCACACCATTCTTCATTTTCTTCGGCAGCCTGTCCGACCGGATTGGCCGCAA‑GAAAATCATCATGGCCGGCTGCATCATCGCCGCGCTGACCTACTTCCCGATCTTCaa                                                                                           <  3:115383/149‑1 (MQ=255)                                                   cAGACCGCCAACCTGCTGATTGCCGGTTCACTGTTGATCGGCACACCATTCTTCATTTTCTTCGGCAGCCTGTCCGACCGGATTGGCCGCAA‑GAAAATCATCATGGCCGGCTGCATCATCGCCGCGCTGACCTACTTCCCGATCTTCaa                                                                                           <  3:35388/149‑1 (MQ=255)                                                    aGACCGCCAACCTGCTGATTGCCGGTTCACTGTTGATCGGCACACCATTCTTCATTTTCTTCGGCAGCCTGTCCGACCGGATTGGCCGCAA‑GAAAATCATCATGGCCGGCTGCATCATCGCCGCGCTGACCTACTTCCCGATCTTCAAg                                                                                          >  6:257062/1‑149 (MQ=255)                                                             aCCTGCTGATTGCCGGTTCACTGTTGATCGGCACACCATTCTTCATTTTCTTCGGCAGCCTGTCCGACCGGATTGGCCGCAA‑GAAAATCATCATGGCCGGCTGCATCATCGCCGCGCTGACCTACTTCCCGATCTTCAAGGCACTGAcc                                                                                 <  5:257062/149‑1 (MQ=255)                                                                tgctgATTGCCGGTTCACTGTTGATCGGCACACCATTCTTCATTTTCTTCGGCAGCCTGTCCGACCGGATTGGCCGCAA‑GAAAATCATCATGGCCGGCTGCATCATCGCCGCGCTGACCTACTTCCCGATCTTCAAGGCACTGACCGAg                                                                              >  6:287764/1‑149 (MQ=255)                                                                tgctgATTGCCGGTTCACTGTTGATCGGCACACCATTCTTCATTTTCTTCGGCAGCCTGTCCGACCGGATTGGCCGCAA‑GAAAATCATCATGGCCGGCTGCATCATCGCCGCGCTGACCTACTTCCCGATATTCAAGGCACTGACCGAg                                                                              >  8:198227/1‑149 (MQ=255)                                                                  ctgATTGCCGGTTGACTGTTGATCTGCACACGATTCTTGATTTTCTTCGGCAGCCTGTCCTACCGGATTGGCCGCAA‑GATAATCATCATGGCCGGCTGCATCATCGCCGCGCTGACCTAGTTCCCGATCTTCAAGGCACTGTCCGAGt                                                                             <  2:322063/148‑1 (MQ=255)                                                                     aTTGCCGGTTCACTGTTGATCGGCACACCATTCTTCATTTTCTTCGGCAGCCTGTCCGACCGGATTGGCCGCAA‑GAAAATCATCATGGCCGGCTGCATCATCGCCGCGCTGACCTACTTCCCGATCTTCAAGGCACTGACCGAGTACg                                                                          <  7:53789/148‑1 (MQ=255)                                                                          cGGTTCACTGTTGATCGGCACACCATTCTTCATTTTCTTCGGCAGCCTGTCCGACCGGATTGGCCGCAA‑GAAAATCATCATGGCCGGCTGCATCATCGCCGCGCTGACCTACTTCCCGATCTTCAAGGCACTGACCGAGTACGGCAAcc                                                                    >  4:126350/1‑149 (MQ=255)                                                                                aCTGTTGATCGGCACACCATTCTTCATTTTCTTCGGCAGCCTGTCCGACCGGATTGGCCGCAA‑GAAAatcatc                                                                                                                                          >  7:44922/1‑73 (MQ=255)                                                                                aCTGTTGATCGGCACACCATTCTTCATTTTCTTCGGCAGCCTGTCCGACCGGATTGGCCGCAA‑GAAAatcatc                                                                                                                                          <  8:44922/73‑1 (MQ=255)                                                                                  tGTTGATTGGCACACCATTCTTCATTTTCTTCGGCAGCCTGTCCGACCGGATTGGCCGCAA‑GAAAATCATCATGGCCGGCTGCATCATCGCCGCGCTGACCTACTTCCCGATCTTCAAGGCACTGACCGAGTACGGCAACCCGGATGTa                                                            >  5:91976/1‑149 (MQ=255)                                                                                    ttGATCGGCACACCATTCTTCATTTTCTTCGGCAGCCTGTCCGACCGGATTGGCCGCAA‑GAAAATCATCATGGCCGGCTGCATCATCGCCGCGCTGACCTACTTCCCGATCTTCAAGGCACTGACCGAGTACGGCAACCCGGATGTAtt                                                          >  7:196980/1‑149 (MQ=255)                                                                                       aTCGGCACACCATTCTTCATTTTCTTCGGCAGCCTGTCCGACCGGATTGGCCGCAA‑GAAAATCATCATGGCCGGCTGCATCATCGCCGCGCTGACCTACTTCCCGATCTTCAAGGCACTGACCGAGTACGGCAACCCGGATGTATTCGt                                                       >  4:153205/1‑149 (MQ=255)                                                                                        tCGGCACACCATTCTTCATTTTCTTCGGCAGCCTGTCCGACCGGATTGGCCGCAA‑GAAAATCATCATGGCCGGCTGCATCATCGCCGCGCTGACCTACTTCCCGATCTTCAAGGCACTGACCGAGTACGGCAACCCGGATGTATTCGtt                                                      <  4:296762/149‑1 (MQ=255)                                                                                        tCGGCACACCATTCTTCATTTTCTTCGGCAGCCTGTCCGACCGGATTGGCCGCAA‑GAAAATCATCATGGCCGGCTGCATCATCGCCGCGCTGACCTACTTCCCGATCTTCAAGGCACTGACCGAGTACGGCAACCCGGATGTATTCGtt                                                      <  1:29400/149‑1 (MQ=255)                                                                                        tCGGCACACCATTCTTCATTTTCTTCGGCAGCCTGGCCGACCGGATTGGCCGCAA‑GAAAATAATCATGGCCGGCGGCATCATCGCCGCGCTGACATACTTCCCGATCTTCAAGGCACTGACCGAGTACGGCAACCCGGATGTATGCGtt                                                      <  5:194485/149‑1 (MQ=255)                                                                                        tCGGCACACCATTCTTCATTTTCATCGGCAGCCTGTCCGACCGGATTGCCCGCAA‑GAATATCATCATGGCCGGCTGCATCATCGCCGCGCTGACCTACTTCCCGATCTTCAAGGCACTGACCGAGTACGGCAACCCGGATGTATTCGtt                                                      <  5:199000/149‑1 (MQ=255)                                                                                            cacaCCATTCTTCATTTTCTTCGGGAGCCTGTCCGACCGGATTGGCCGCAA‑GAAAATCATCATGGCCGGCTGCATCATCGCCGCGCTGACCTACTTCCCGATCTTCAAGGCACTGTCCGAGTACGGCAACCCGGATGTATTCGTTGccc                                                  <  2:168029/149‑1 (MQ=255)                                                                                                ccATTCTTCATTTTCTTCGGCAGCCTGTCCGACCGGATTGGCCGCAA‑GAAAATCATCATGGCCGGCTGCATCATCGCCGCGCTGACCTACTTCCCGATCTTCAAGGCACTGACCGAGTACGGCAACCCGGATGTATTCGTTGCCCAGGa                                              <  5:30188/149‑1 (MQ=255)                                                                                                  aTTCTTCATTTTCTTCGGCAGCCTGTCCGACCGGATTGGCCGCaagaaaatgaagaatggtgtgccgatcaacagtgaaccggcaatcagcaggttggcggtctgcgc                                                                                      >  7:177910‑M2/1‑43 (MQ=255)                                                                                                  aTTCTTCATTTTCTTCGGCAGCCTGTCCGACCGGATTGGCCGCaagaaaatgaagaatggtgtgccgatcaacagtgaaccggcaatcagcaggttggcggtctgcgc                                                                                      <  8:177910‑M2/108‑66 (MQ=255)                                                                                                  aTTCTTCATTTTCTTCGGCAGCCTGTCCGACCGGATTGGCCGCAA‑GAAAATCATCATGGCCGGCTGCATCATCGCCGCGCTGACCTACTTCCCGATCTTCAAGGCACTGACCGAGTACGGCAACCCGGATGTATTCGTTGCCCAGGAGc                                            <  5:287764/149‑1 (MQ=255)                                                                                                     cttcATTTTCTTCGGCAGCCTGTCCGACCGGATTGGCCGCAA‑GAAAATCATCATGGCCGGCTGCATCATCGCCGCGCTGACCTACTTCCCGATCTTCAAGGCACTGACCGAGTACGGCAACCCGGATGTATTCGTTGCCCAGGAGCAg                                          >  3:143717/1‑148 (MQ=255)                                                                                                      ttcATTTTCTTCGGCAGCCTGTCCGACCGGATTGGCCGCAA‑GAAAATCATCATGGCCGGCTGCATCATCGCCGCGCTGACCTACTTCCCGATCTTCAAGGCACTGACCGAGTACGGCAACCCGGATGTATTCGTTGCCCAGGAGCAGaa                                        >  5:166933/1‑149 (MQ=255)                                                                                                       tcATTTTCTTCGGCAGCCTGTCCGACCGGATTGGCCGCaagaaaatgaagaatggtgtgccgatcaacagtgaaccggcaatcagcaggttggcggtctgcgcctcgatcttgagcgtctgcaacaggaagaacaacgcgtagaactgc                                        <  6:313228‑M2/149‑112 (MQ=255)                                                                                                       tcATTTTCTTCGGCAGCCTGTCCGACCGGATTGGCCGCAA‑GAAAATCATCATGGCCGGCTGCATCATCGCCGCGCTGACCTACTTCCCGATCTTCAAGGCACTGACCGAGTACGGCAACCCGGATGTATTCGt                                                       >  1:199814/1‑133 (MQ=255)                                                                                                       tcATTTTCTTCGGCAGCCTGTCCGACCGGATTGGCCGCAA‑GAAAATCATCATGGCCGGCTGCATCATCGCCGCGCTGACCTACTTCCCGATCTTCAAGGCACTGACCGAGTACGGCAACCCGGATGTATTCGt                                                       <  2:199814/133‑1 (MQ=255)                                                                                                       tcATTTTCTTCGGCAGCCTGTCCGACCGGATTGGCCGCAA‑GAAAATCATCATGGCCGGCTGCATCATCGCCGCGCTGACCTACTTCCCGATCTTCAAGGCACTGACCGAGTACGGCAACCCGGATGTATTCGTTGCCCAGGAGCAGAAc                                       >  4:283260/1‑149 (MQ=255)                                                                                                        cATTTTCTTCGGCAGCCTGTCCGACCGGATTGGCCGCaagaaaatgaagaatggtgtgccgatcaacagtgaaccggcaatcagcaggttggcggtctgcgcctcgatcttgagcgtctgcaacaggaagaacaacgcgtagaactgcc                                       <  1:307725‑M2/149‑113 (MQ=255)                                                                                                        cATTTTCTTCGGCAGCCTGTCCGACCGGATTGGCCGCAA‑GAAAATCATCATGGCCGGCTGCATCATCGCCGCGCTGACCTACTTCCCGATCTTCAAGGCACTGACCGAGTACGGCAACCCGGATGTATTCGTTGCCCAGGAGCAGa                                         <  5:61515/146‑1 (MQ=255)                                                                                                         aTTTTCTTCGGCAGCCTGTCCGACCGGATTGGCCGCAA‑GAAAATCATCATGGCCGGCTGCATCATCGCCGCGCTGACCTACTTCCCGATCTTCAAGGCACTGACCGAGTACGGCAACCCGGATGTATTCGTTGCCCAGGAGCAGAAcc                                      <  7:198227/148‑1 (MQ=255)                                                                                                             tcttcGGCAGCCTGTCCGACCGGATTGGCCGCAA‑GAAAATCATCATGGCCGGCTGCATCATCGCCGCGCTGACCTACTTCCCGATCTTCAAGGCACTGACCGAGTACGGCAACCCGGATGTATTCGTTGCCCAGGAGCAGAACCCGGtt                                 >  7:209020/1‑149 (MQ=255)                                                                                                              cttcGGCAGCCTGTCCGACCGGATTGGCCGCAA‑GAAAATCATCATGGCCGGCTGCATCATCGCCGCGCTGACCTACTTCCCGATCTTCAAGGCACTGACCGAGTACGGCAACCCGGAt                                                               <  6:134583/118‑1 (MQ=255)                                                                                                              cttcGGCAGCCTGTCCGACCGGATTGGCCGCAA‑GAAAATCATCATGGCCGGCTGCATCATCGCCGCGCTGACCTACTTCCCGATCTTCAAGGCACTGACCGAGTACGGCAACCCGGAt                                                               >  5:134583/1‑118 (MQ=255)                                                                                                                 cGGCAGCCTGTCCGACCGGATTGGCCGCAA‑GAAAATCATCATGGCCGGCTGCATCATCGCCGCGCTGACCTACTTCCCGATCTTCAAGGCACTGACCGAGTACGGCAACCCGGATGTATTCGTTGCCCAGGAGCAGAACCCGGTtgtg                              <  3:153205/148‑1 (MQ=255)                                                                                                                       ccTGTCCGACCGGATTGGCCGCAA‑GAAAATCATCATGGCCGGCTGCATCATCGCCGCGCTGACCTACTTCCCGATCTTCAAGGCACTGACCGAGTACGGCAACCCGGATGTATTCGTTGCCCAGGAGCAGAACCCGGTTGtggtggtgg                       >  8:120699/1‑149 (MQ=255)                                                                                                                         tGTCCGACCGGATTGGCCGCAA‑GAAAATCATCATGGCCGGCTGCATCATCGCCGCGCTGACCTACTTCCCGATCTTCAAGGCACTGACCGAGTACGGCAACCCGGATGTATTCGTTGCCCAGGAGCAGAACCCGGTTGTGGTGGTGGcc                     >  8:87611/1‑149 (MQ=255)                                                                                                                             cGACCGGATTGGCCGCaagaaaatgaagaatggtgtgccgatcaacagtgaaccggcaatcagcaggttggcggtctgcgcctcgatcttgagcgtctgcaacaggaagaacaacgcgtagaactgcccggtgtaccacaccacggcct                  >  2:307725‑M2/1‑16 (MQ=255)                                                                                                                             cGACCGGATTGGCCGCAA‑GAAAATCATCATGGCCGGCTGCATCATCGCCGCGCTGACCTACTTCCCGATCTTCAAGGCACTGACCGAGTACGGCAACCCGGATGTATTCGTTGCCCAGGAGCAGAACCCGGGTGTGGTGGTGGCAGAcc                 >  5:4507/1‑149 (MQ=255)                                                                                                                                ccGGATTGGCCGCAA‑GAAAATCATCATGGCCGGCTGCATCATCGCCGCGCTGACCTACTTCCCGATCTTCAAGGCACTGACCGAGTACGGCAACCCGGATGTATTCGTTGCCCAGGAGCAGAACCCGGTTGTGGTGGTGGCCGACCCgg              <  8:209020/149‑1 (MQ=255)                                                                                                                                ccGGATTGGCCGCAA‑GAAAATCATCATGGCCGGCTGCATCATCGCCGCGCTGACCTACTTCCCGATCTTCAAGGCACTGACCGAGTACGGCAACCCGGATGTATTCGTTGCCCAGGAGCAGAACCCGGTTGTGGTGGTGGCCGACCCgg              <  3:283260/149‑1 (MQ=255)                                                                                                                                      tGGCCGCAA‑GAAAATCATCATGGCCGGCTGCATCATCGCCGCGCTGACCTACTTCCCGATCTTCAAGGCACTGACCGAGt                                                                             <  4:248900/80‑1 (MQ=255)                                                                                                                                      tGGCCGCAA‑GAAAATCATCATGGCCGGCTGCATCATCGCCGCGCTGACCTACTTCCCGATCTTCAAGGCACTGACCGAGTACGGCAACCCGGATGTATTCGTTGCCCAGGAGCAGAACCCGGTTGTGGTGGTGGCCGACCCGGGCCAAt        >  1:71959/1‑149 (MQ=255)                                                                                                                                            cAA‑GAAAATCATCATGGCCGGCTGCATCATCGCCGCGCTGACCTACTTCCCGATCTTCAAGGCACTGACCGAGTACGGCAACCCGGATGTATTCGTTGCCCAGGAGCAGAACCCGGTTGTGGTGGTGGCCGACCCGGGCCAATGTGCAt  <  2:71959/149‑1 (MQ=255)                                                                                                                                            |                                                                                                                                                      GGCAGTTCTACGCGTTGTTCTTCCTGTTGCAGACGCTCAAGATCGAGGCGCAGACCGCCAACCTGCTGATTGCCGGTTCACTGTTGATCGGCACACCATTCTTCATTTTCTTCGGCAGCCTGTCCGACCGGATTGGCCGCAA‑GAAAATCATCATGGCCGGCTGCATCATCGCCGCGCTGACCTACTTCCCGATCTTCAAGGCACTGACCGAGTACGGCAACCCGGATGTATTCGTTGCCCAGGAGCAGAACCCGGTTGTGGTGGTGGCCGACCCGGGCCAATGTGCAT  >  NC_002947/2936775‑2937062

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.