New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3790971 =	33 (0.640)	3 (0.060)	3/248	NT	7.8%	coding (415/1026 nt)	PP_3353	sulfatase‑modifying protein
	?	NC_002947	3791040 =	39 (0.790)					coding (484/1026 nt)	PP_3353	sulfatase‑modifying protein

AGGACGACCCTGCCCTGCCCGACGCGCTGCGGATACCGGGTGCGATGGTGTTTCATCAGGGTGCGGACGTGCTCGGCCCCGGCTGGCAGTTCGTGCCCGGCGCCAACTGGCGACACCCGCAAGGGCCGGGCAGCAGCCTGGCCGGGCTGGACAACCATCCGGTGGTGCAGATCGCCCTGGAAGATGCCCAGGCCTATGCCCGCTGGGCAGGCCGCGAACTGCCCAGCGAGGCGCAGCTGGAATACGCCATGCGCGGCGGCCTGACCGATGCCGACTTCAGCTGGGGTACCACC  >  NC_002947/3790894‑3791186                                                                                                                                                   |                                                                                                                                                   ggcagttcgcggcctgcccagcgggcataggcctgggcatcttccagggcgatctgcaccaccggatggttgtccagCCCGGCTGGCAGTTCGTGCCCGGCGCCAACTGGCGACACCCGCAAGGGCCGGGCAGCAGCCTGGCCGGGc                                                                                                                                                    >  1:160505‑M1/78‑147 (MQ=255) ggcagttcgcggcctgcccagcgggcataggcctgggcatcttccagggcgatctgcaccaccggatggttgtccagCCCGGCTGGCAGTTCGTGCCCGGCGCCAACTGGCGACACCCGCAAGGGCCGGGCAGCAGCCTGGCCGGGCt                                                                                                                                                   >  3:138255‑M1/78‑148 (MQ=255)   gacgacCCTGCCCTGCCCGACGCGCTGCGGATACCGGGTGCGATGGTGTTTCATCAGGGTGCGGACGTGCTCGGCCCCGGCTGGCAGTTCGTGCCCGGCGCCAACTGGCGACACCCGCAAGGGCCGGGCAGCAGCCTGGCCGGGCTGGa                                                                                                                                                <  5:313968/149‑1 (MQ=255)      gacCCTGCCCTGCCCGACGCGCTGCGGATACCGGGTGCGATGGTGTTTCATCAGGGTGCGGACGTGCTCGGCCCCGGCTGGCAGTTCGTGCCCGGCGCCAACTGGCGACACCCGCAAGGGCCGGGCAGCAGCCTGGCCGGGCTGGACaa                                                                                                                                             <  6:79937/149‑1 (MQ=255)         cctgccctgcCCGACGCGCTGCGGATACCGGGTGCGATGGTGTTTCATCAGGGTGCGGACGTGCTCGGCCCCGGCTGGCAGTTCGTGCCCGGCGCCAACTGGCGACACCCGCAAGGGCCGGGCAGCAGCCTGGCCGGGCTGGACAAcc                                                                                                                                           >  4:37066/1‑148 (MQ=255)             ccctgcccGACGCGCTGCGGATACCGGGTGCGATGGTGTTTCATCAGGGTGCGGACGTGCTCGGCCCCGGCTGGCAGTTCGTGCCCGGCGCCAACTGGCGACACCCGCAAGGGCCGGGCAGCAGCCTGGCCGGGCTGGACAACCATc                                                                                                                                        <  8:120083/147‑1 (MQ=255)             ccctgcccGACGCGCTGCGGATACCGGGTGCGATGGTGTTTCATCAGGGTGCGGACGTGCTCGGCCCCGGCTGGCAGTTCGTGCCCGGCGCCAACTGGCGACACCCGCAAGGGCCGGGCAGCAGCCTGGCCGGGCTGGACAACCATCCg                                                                                                                                      <  2:177031/149‑1 (MQ=255)              cctgcccGACGCGCTGCGGATACCGGGTGCGATGGTGTTTCATCAGGGTGCGGACGTGCTCGGCCCCGGCTGGCAGTTCGTGCCCGGCGCCAACTGGCGACACCCGCAAGGGCCGGGCAGCAGCCTGGCCGGGCTGGACAACCATCCgg                                                                                                                                     >  3:260547/1‑149 (MQ=255)                  cccGACGCGCTGCGGATACCGGGTGCGATGGTGTTTCATCAGGGTGCGGACGTGCTCGGCCCCGGCTGGCAGTTCGTGCCCGGCGCCAACTGGCGACACCCGCAAGGGCCGGGCAGCAGCCTGGCCGGGCTGGACAACCATCCggtggt                                                                                                                                 <  3:37066/149‑1 (MQ=255)                  cccGACGCGCTGCGGATACCGGGTGCGATGGTGTTTCATCAGGGTGCGGACGTGCTCGGCCCCGGCTGGCAGTTCGTGCCCGGCGCCAACTGGCGACACCCGCAAGGGCCGGGCAGCAGCCTGGCCGGGCTGGACAACCATCCggtg                                                                                                                                   <  4:260547/147‑1 (MQ=255)                                  tACCGGGTGCGATGGTGTTTCATCAGGGTGCGGACGTGCTCGGCCCCGGCTGGCAGTTCGTGCCCGGCGCCAACTGGCGACACCCGCAAGGGCCGGGCAGCAGCCTGGCCGGGCTGGACAACCATCCGGTGGTGCAGATCGCCCTGGaa                                                                                                                 <  4:303065/149‑1 (MQ=255)                                    ccGGGTGCGATGGTGTTTCATCAGGGTGCGGACGTGCTCGGCCCCGGCTGGCAGTTCGTGCCCGGCGCCAACTGGCGACACCCGCAAGGGCCGGGCAGCAGCCTGGCCGGGCTGGACaa                                                                                                                                             >  6:104770/1‑119 (MQ=255)                                    ccGGGTGCGATGGTGTTTCATCAGGGTGCGGACGTGCTCGGCCCCGGCTGGCAGTTCGTGCCCGGCGCCAACTGGCGACACCCGCAAGGGCCGGGCAGCAGCCTGGCCGGGCTGGACaa                                                                                                                                             <  5:104770/119‑1 (MQ=255)                                     cGGGTGCGATGGTGTTTCATCAGGGTGCGGACGTGCTCGGCCCCGGCTGGCAGTTCGTGCCCGGCGCCAACTGGCGACACCCGCAAGGGCCGGGCAGCAGCCTGGCCGGGc                                                                                                                                                    >  7:117889/1‑111 (MQ=255)                                     cGGGTGCGATGGTGTTTCATCAGGGTGCGGACGTGCTCGGCCCCGGCTGGCAGTTCGTGCCCGGCGCCAACTGGCGACACCCGCAAGGGCCGGGCAGCAGCCTGGCCGGGc                                                                                                                                                    <  8:117889/111‑1 (MQ=255)                                     cGGGTGCGATGGTGTTTCATCAGGGTGCGGACGTGCTCGGCCCCGGCTGGCAGTTCGTGCCCGGCGCCAACTGGCGACACCCGCAAGGGCCGGGCAGCAGCCTGGCCGGGCTGGACAACCATCCGGTGGTGCAGATCGCCCTGGAAGAt                                                                                                              <  4:101438/149‑1 (MQ=255)                                                     tcatcaGGGTGCGGACGTGCTCGGCCCCGGCTGGCAGTTCGTGCCCGGCGCCAACTGGCGACACCCGCAAGGGCCGGGCAGCAGCCTGGCCGGGCTGGACAACCATCCGGTGGTGCa                                                                                                                              <  2:212488/117‑1 (MQ=255)                                                     tcatcaGGGTGCGGACGTGCTCGGCCCCGGCTGGCAGTTCGTGCCCGGCGCCAACTGGCGACACCCGCAAGGGCCGGGCAGCAGCCTGGCCGGGCTGGACAACCATCCGGTGGTGCa                                                                                                                              >  1:212488/1‑117 (MQ=255)                                                             gTGCGGACGTGCTCGGCCCCGGCTGGCAGTTCGTGCCCGGCGCCAACTGGCGACACCCGCAAGGGCCGGGCAGCAGCCTGGCCGGGCTGGACAACCATCCGGTGGTGCAGATCGCCCTGGAAGATGCCCAGGCCTATGCCCGCTggg                                                                                        >  4:108278/1‑147 (MQ=255)                                                                 ggACGTGCTCGGCCCCGGCTGGCAGTTCGTGCCCGGCGCCAACTGGCGACACCCGCAAGGGCCGGGCAGCAGCCTGGCCGGGCTGGACAACCATCCGGTGGTGCAGATCGCCCTGGAAGATGCCCAGGCCTATGCCCGCTGGGCAGGcc                                                                                  >  7:129227/1‑149 (MQ=255)                                                                 ggACGTGCTCGGCCCCGGCTGGCAGTTCGTGCCCGGCGCCAACTGGCGACACCCGCAAGGGCCGGGCAGCAGCCTGGCCGGGCTGGACAACCATCCGGTGGTGCAGATCGCCCTGGAAGATGCCCAGGCCTATGCCCGCTGGGCAGGcc                                                                                  >  3:212636/1‑149 (MQ=255)                                                                            agcccggccaggctgctgcccggcccttgcgggtgtcgccagttggcgccgggcacgaactgccagccgggCTGGACAACCATCCGGTGGTGCAGATCGCCCTGGAAGATGCCCAGGCCTATGCCCGCTGGGCAGGCCGCGAACTGcc                                                                        >  3:138255‑M2/72‑148 (MQ=255)                                                                             gcccggccaggctgctgcccggcccttgcgggtgtcgccagttggcgccgggcacgaactgccagccgggCTGGACAACCATCCGGTGGTGCAGATCGCCCTGGAAGATGCCCAGGCCTATGCCCGCTGGGCAGGCCGCGAACTGcc                                                                        >  1:160505‑M2/71‑147 (MQ=255)                                                                             ccccGGCTGGCAGTTCGTGCCCGGCGCCAACTGGCGACACCCGCAAGGGCCGGGCAGCAGCCTGGCCGGGCTGGACAACCATCCGGTGGTGCAGATCGCCCTGGAAGATGCCCAGGCCTATGCCCGCTGGGCAGGCCACGAACTGcc                                                                        >  4:114014/1‑147 (MQ=255)                                                                               CCGGCTGGCAGTTCGTGCCCGGCGCCAACTGGCGACACCCGCAAGGGCCGGGCAGCAGCCTGGCCGGGCTGGACAACCATCCGGTGGTGCAGATCGCCCTGGAAGATGCCCAGGCCTATGCCCGCTGGGCAGGCCGCGAACTGCCCAGc                                                                    >  8:129227‑M1/1‑149 (MQ=255)                                                                                      tcAGTTCGTGCCCGGCGCCAACTGGCGACACCCGCAAGGGCCGGGCAGCAGCCTGGCCGGGCTGGACAACCATCCGGTGGTGCAGATCGCCCTGGAAGATGCCCAGGCCTATGCCCGCTGGGCAGGCCGCGAACTGCCCAGCGAGgc                                                               <  1:303697/146‑1 (MQ=255)                                                                                      gCAGTTCGTGCCCGGCGCCAACTGGCGACACCCGCAAGGGCCGGGCAGCAGCCTGGCCGGGCTGGACAACCATCCGGTGGTGCAGATCGCCCTGGAAGATGCCCAGGCCTATGCCCGCTGGGCAGGCCGCGAACTGCCCAGCGAGgcg                                                              >  1:125259/1‑148 (MQ=255)                                                                                             gTGCCCGGCGCCAACTGGCGACACCCGCAAGGGCCGGGCAGCAGCCTGGCCGGGCTGGACAACCATCCGGTGGTGCAGATCGCCCTGGAAGATGCCCAGGCCTATGCCCGCTGGGCAGGCCGCGAACTGCCCAGCGAGGCGCAGCTGGa                                                      <  4:212636/149‑1 (MQ=255)                                                                                               gCCCGGCGCCAACTGGCGACACCCGCAAGGGCCGGGCAGCAGCCTGGCCGGGCTGGACAACCATCCGGTGGTGCAGATCGCCCTGGAAGATGCCCAGGCCTATGCCCGCTGGGCAGGCCACGAACTGCCCAGCGAGGCGCAGCTgggca                                                    <  3:114014/149‑4 (MQ=255)                                                                                               ccggccattgcgggtgtcgccagttggcgccgggcacgaactgccagccgggCTGGACAACCATCCGGTGGTGCAGATCGCCCTGGAAGATGCCCAGGCCTATGCCCGCTGGGCAGGCCGCGAACTGCCAAGCGAGGCGCAGCTGGaa                                                     >  7:230013‑M2/53‑148 (MQ=255)                                                                                                cccGGCGCCAACTGGCGACACCCGCAAGGGCCGGGCAGCAGCCTGGCCGGGCTGGACAACCATCCGGTGGTGCAGATCGCCCTGGAAGATGCCCAGGCCTATGCCCGCTGGGCAGGCCGCGAACTGCCCAGCGAGGCGCAGCTGGAAt                                                    <  6:178100/148‑1 (MQ=255)                                                                                                cccGGCGCCAACTGGCGACACCCGCAAGGGCCGGGCAGCAGCCTGGCCGGGCTGGACAACCATCCGGTGGTGCAGATCGCCCTGGAAGATGCCCAGGCCTATGCCCGCTGGGCAGGCCGCGAACTGCCCAGCGAGGCGCAGCTGGAATa                                                   >  7:136944/1‑149 (MQ=255)                                                                                                    gcgcCAACTGGCGACACCCGCAAGGGCCGGGCAGCAGCCTGGCCGGGCTGGACAACCATCCGGTGGTGCAGATCGCCCTGGAAGATGCCCAGGCCTATGCCCGCTGGGCAGGCCGCGAACTGCCCAGCGAGGCGCAGCTGGAATACGc                                                >  2:41878/1‑148 (MQ=255)                                                                                                      gcCAACTGGCGACACCCGCAAGGGCCGGGCAGCAGCCTGGCCGGGCTGGACAACCATCCGGTGGTGCAGATCGCCCTGGAAGATGCCCAGGCCTATGCCCGCTGGGCAGGCCGCGAACTGCCCAGCGAGGCGCAGCTGGAATACGCCAt                                             <  8:136944/149‑1 (MQ=255)                                                                                                      gcCAACTGGCGACACCCGCAAGGGCCGGGCAGCAGCCTGGCCGGGCTGGACAACCATCCGGTGGTGCAGATCGCCCTGGAAGATGCCCAGGCCTATGCCCGCTGGGCAGGCCGCGAACTGCCCAGCGAGGCGCAGCTGGAATACGCCAt                                             >  7:78293/1‑149 (MQ=255)                                                                                                            tGGCGACACCCGCAAGGGCCGGGCAGCAGCCTGGCCGGGCTGGACAACCATCCGGTGGTGCAGATCGCCCTGGAAGATGCCCAGGc                                                                                                      <  1:119166/86‑1 (MQ=255)                                                                                                            tGGCGACACCCGCAAGGGCCGGGCAGCAGCCTGGCCGGGCTGGACAACCATCCGGTGGTGCAGATCGCCCTGGAAGATGCCCAGGc                                                                                                      >  2:119166/1‑86 (MQ=255)                                                                                                                gACACCCGCAAGGGCCGGGCAGCAGCCTGGCCGGGCTGGACAACCATCCGGTGGTGCAGATCGCCCTGGAAGATGCCCAGGCCTATGCCCGCTGGGCAGGCCGCGAACTGCCCAGCGAg                                                                 >  8:277500/1‑119 (MQ=255)                                                                                                                gACACCCGCAAGGGCCGGGCAGCAGCCTGGCCGGGCTGGACAACCATCCGGTGGTGCAGATCGCCCTGGAAGATGCCCAGGCCTATGCCCGCTGGGCAGGCCGCGAACTGCCCAGCGAg                                                                 <  7:277500/119‑1 (MQ=255)                                                                                                                gACACCCGCAAGGGCCGGGCAGCAGCCTGGCCGGGCTGGACAACCATCCGGTGGTGCAGATCGCCCTGGAAGATGCCCAGGCCTATGCCCGCTGGGCAGGCCGCGAACTGCCCAGCGAGGCGCAGCTGGAATACGCCATGCGCggcggc                                   >  3:72247/1‑149 (MQ=255)                                                                                                                     ccGCAAGGGCCGGGCAGCAGCCTGGCCGGGCTGGACAACCATCCGGTGGTGCAGATCGCCCTGGAAGATGCCCAGGCCTATGCCCGCTGGGCAGGCCGCGAACTGCCCAGCGAgg                                                                >  6:186685/1‑115 (MQ=255)                                                                                                                     ccGCAAGGGCCGGGCAGCAGCCTGGCCGGGCTGGACAACCATCCGGTGGTGCAGATCGCCCTGGAAGATGCCCAGGCCTATGCCCGCTGGGCAGGCCGCGAACTGCCCAGCGAgg                                                                <  5:186685/115‑1 (MQ=255)                                                                                                                     ccGCAAGGGCCGGGCAGCAGCCTGGCCGGGCTGGACAACCATCCGGTGGTGCAGATCGCCCTGGAAGATGCCCAGGCCTATGCCCGCTGGGCAGGCCGCGAACTGCCCAGCGAGGCGCAGCTGGAATACGCCATGCGCGGCGGCCTGAc                              <  3:108278/149‑1 (MQ=255)                                                                                                                        cAAGGGCCGGGCAGCAGCCTGGCCGGGCTGGACAACCATCCGGTGGTGCAGATCGCCCTGGAAGATGCCCAGGCCTATGCCCGCTGGGCAGGCCGCGAACTGCCCAGCGAGGCGCAGCTGGAATACGCCATGCGCGGCGGCCTGACCGa                           <  1:41878/149‑1 (MQ=255)                                                                                                                         aaGGGCCGGGCAGCAGCCTGGCCGGGCTGGACAACCATCCGGTGGTGCAGATCGCCCTGGAAGATGCCCAGGCCTATGCCCGCTGGGCAGGCCGCGAACTGCCCAGCGAGGCGCAGCTGGAATACGCCATGCGCGGCGGCCTGACCGAt                          <  8:78293/149‑1 (MQ=255)                                                                                                                              ccGGGCAGCAGCCTGGCCGGGCTGGACAACCATCCGGTGGTGCAGATCGCCCTGGAAGATGCCCAGGCCTATGCCCGCTGGGCAGGCCGCGAACTGCCCAGCGAGGCGCAGCTGGAATACGCCATGCGCGGCGGCCTGACCGATGCCGa                     <  6:42435/149‑1 (MQ=255)                                                                                                                              ccGGGCAGCAGCCTGGCCGGGCTGGACAACCATCCGGTGGTGCAGATCGCCCTGGAAGATGCCCAGGCCTATGCCCGCTGGGCAGGCCGCGAACTGCCCAGCGAGGCGCAGCTGGAATACGCCATGCGCGGCGGCCTGACCGATGCCGa                     >  1:189307/1‑149 (MQ=255)                                                                                                                                  gcagcaGCCTGGCCGGGCTGGACAACCATCCGGTGGTGCAGATCGCCCTGGAAGATGCCCAGGCCTATGCCCGCTGGGCAGGCCGCGAACTGCCCAGCGAGGCGCAGCTGGAATACGCCATGCGCGGCGGCCTGACCGATGCCGACtt                  >  6:237615/1‑148 (MQ=255)                                                                                                                                         cccggCCGGGCTGGACAACCATCCGGTGGTGCAGATCGCCCTGGAAGATGCCCAGGCCTATGCCCGCTGGGCAGGCCGCGAACTGCCCAGCGAGGCGCAGCTGGAATACGCCATGCGCGGCGGCCTGACCGATGCCGACTTCAGCTggg          <  1:46801/146‑1 (MQ=255)                                                                                                                                         ccTGGCCGGGCTGGACAACCATCCGGTGGTGCAGATCGCCCTGGAAGATGCCCAGGCCTATGCCCGCTGGGCAGGCCGCGAACTGCCCAGCGAGGCGCAGCTGGAATACGCCATGCGCGGCGGCCTGACCGATGCCGACTTCAGCTggg          <  4:72247/149‑1 (MQ=255)                                                                                                                                             gccgggCTGGACAACCATCCGGTGGTGCAGATCGCCCTGGAAGATGCCCAGGCCTATGCCCGCTGGGCAGGCCGCGAACTGCCCAGCGAGGCGCAGCTGGAATACGCCATGCGCGGCGGCCTGACCGATGCCGACTTCAGCTGGGGt        <  2:188202‑M2/141‑1 (MQ=255)                                                                                                                                                 ggCTGGACAACCATCCGGTGGTGCAGATCGCCCTGGAAGATGCCCAGGCCTATGCCCGCTGGGCAGGCCGCGAACTGCCCAGCGAGGCGCAGCTGGAATACGCCATGCGCGGCGGCCTGACCGATGCCGACTTCAGCTGGGGTaccacc  >  2:162628‑M2/3‑149 (MQ=255)                                                                                                                                                 ggCTGGACAACCATCCGGTGGTGCAGATCGCCCTGGAAGATGCCCAGGCCTATGCCCGCTGGGCAGGCCGCGAACTGCCCAGCGAGGCGCAGCTGGAATACGCCATGCGCGGCGGCCTGACCGATGCCGACTTCAGCTGGGGTaccacc  >  1:317450‑M2/3‑149 (MQ=255)                                                                                                                                                   |                                                                                                                                                   AGGACGACCCTGCCCTGCCCGACGCGCTGCGGATACCGGGTGCGATGGTGTTTCATCAGGGTGCGGACGTGCTCGGCCCCGGCTGGCAGTTCGTGCCCGGCGCCAACTGGCGACACCCGCAAGGGCCGGGCAGCAGCCTGGCCGGGCTGGACAACCATCCGGTGGTGCAGATCGCCCTGGAAGATGCCCAGGCCTATGCCCGCTGGGCAGGCCGCGAACTGCCCAGCGAGGCGCAGCTGGAATACGCCATGCGCGGCGGCCTGACCGATGCCGACTTCAGCTGGGGTACCACC  >  NC_002947/3790894‑3791186

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.