mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 57 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5578021 | 60 (1.160) | 3 (0.060) | 3/248 | NT | 4.7% | coding (163/810 nt) | rhdA | thiosulfate sulfurtransferase |
| ? | NC_002947 | = 5578058 | 64 (1.300) | coding (200/810 nt) | rhdA | thiosulfate sulfurtransferase | |||||
| * | ? | NC_002947 | 5528584 = | 63 (1.220) | 3 (0.060) | 3/250 | NT | 4.7% | coding (203/765 nt) | ydfG | bifunctional NADP‑dependent 3‑hydroxy acid dehydrogenase/malonic semialdehyde reductase |
| ? | NC_002947 | 5528627 = | 62 (1.250) | coding (160/765 nt) | ydfG | bifunctional NADP‑dependent 3‑hydroxy acid dehydrogenase/malonic semialdehyde reductase | |||||
| * | ? | NC_002947 | = 5032855 | 74 (1.430) | 3 (0.060) | 3/248 | NT | 3.9% | intergenic (+20/‑390) | PP_4435/PP_4437 | hypothetical protein/transposase |
| ? | NC_002947 | = 5032893 | 77 (1.560) | intergenic (+58/‑352) | PP_4435/PP_4437 | hypothetical protein/transposase | |||||
| * | ? | NC_002947 | = 5012433 | 68 (1.320) | 3 (0.060) | 3/248 | NT | 4.3% | coding (206/219 nt) | PP_5677 | hypothetical protein |
| ? | NC_002947 | = 5012453 | 70 (1.420) | coding (186/219 nt) | PP_5677 | hypothetical protein | |||||
| * | ? | NC_002947 | 4898331 = | 66 (1.280) | 3 (0.060) | 3/250 | NT | 4.6% | coding (213/957 nt) | PP_4306 | hypothetical protein |
| ? | NC_002947 | 4898386 = | 60 (1.210) | coding (158/957 nt) | PP_4306 | hypothetical protein | |||||
| * | ? | NC_002947 | 4748769 = | 66 (1.280) | 3 (0.060) | 3/246 | NT | 4.8% | coding (473/1683 nt) | PP_4203 | ubiquinone oxidoreductase electron transfer flavoprotein |
| ? | NC_002947 | 4748810 = | 57 (1.170) | coding (514/1683 nt) | PP_4203 | ubiquinone oxidoreductase electron transfer flavoprotein | |||||
| * | ? | NC_002947 | 4513586 = | 66 (1.280) | 3 (0.060) | 3/250 | NT | 4.7% | coding (1406/2505 nt) | ftsK | DNA translocase FtsK |
| ? | NC_002947 | 4513641 = | 57 (1.150) | coding (1351/2505 nt) | ftsK | DNA translocase FtsK | |||||
| * | ? | NC_002947 | 3676017 = | 40 (0.770) | 4 (0.090) | 3/232 | NT | 10.0% | intergenic (+24/+68) | PP_3240/PP_5592 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | 3676068 = | 36 (0.780) | intergenic (+75/+17) | PP_3240/PP_5592 | hypothetical protein/hypothetical protein | |||||
| * | ? | NC_002947 | = 2521472 | 129 (2.500) | 4 (0.080) | 4/244 | NT | 3.2% | coding (2723/4446 nt) | PP_2212 | leucine‑rich repeat‑containing protein |
| ? | NC_002947 | = 2521513 | 120 (2.480) | coding (2764/4446 nt) | PP_2212 | leucine‑rich repeat‑containing protein | |||||
| * | ? | NC_002947 | 2516240 = | 81 (1.570) | 4 (0.080) | 4/246 | NT | 4.9% | coding (288/1107 nt) | phnW | 2‑aminoethylphosphonate‑‑pyruvate transaminase |
| ? | NC_002947 | 2516334 = | 78 (1.600) | coding (194/1107 nt) | phnW | 2‑aminoethylphosphonate‑‑pyruvate transaminase | |||||