New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	328961 =	56 (0.990)	4 (0.080)	3/242	NT	6.3%	coding (289/1368 nt)	PP_0270	sensor histidine kinase
	?	NC_002947	329005 =	67 (1.260)					coding (245/1368 nt)	PP_0270	sensor histidine kinase

GTGCCCGTACGACTGGTTGCTGCACGCAGCGCCCCCCTGATTGCCCAGGCCGACTGCCACGGCGGTACGCTGCAGGCGCCAGCCCACTACCAGCTTCACTGCGTCGAAAGCCCGCCTGCGCAAGAGCATGACGAGCGCCGCGGGCACAGGCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/329114‑328961 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggcgggCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGTCGTACGGGCACCTCTAGCGCCTGAGCGAAACGCACGTCGAACCAGATGC  >  NC_002947/329005‑329152                                                                                                                                                                                                                                                                                                                GTGCCCGTACGACTGGTTGCTGCACGCAGCGCCCCCCTGATTGCCCAGGCCGACTGCCACGGCGGTACGCTGCAGGCGCCAGCCCACTACCAGCTTCACTGCGTCGAAAGCCCGCCTGCGCAAGAGCATGACGAGCGCCGCGGGCACAG                                                                                                                                                           >  4:292785/1‑149    CCCGTACGACTGGTTGCTGCACGCAGCGCCCCCCTGATTGCCCAGGCCGACTGCCACGGCGGTACGCTGCAGGCGCCAGCCCACTACCAGCTTCACTGCGTCGAAAGCCCGCCTGCGCAAGAGCATGACGAGCGCCGCGGGCACAGGC                                                                                                                                                         <  6:304031/148‑1    CCCGTACGACTGGTTGCTGCACGCAGCGCCCCCCTGATTGCCCAGGACGACTGCCACGGCGGTACGCTGCAGGCGCCAGCCCACTACCAGCTTCACTGCGTCGAAAGCCCGCCTGCGCAAGAGCATGACGAGCGCCGCGGGCACAGGC                                                                                                                                                         <  3:54947/148‑1                                                                                                                CCGCCTGCGCAAGAGCATGACGAGCGCCGCGGGCACAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGTCGTACGG                                            >  5:316973/1‑149                                                                                                                CCGCCTGCGCAAGAGCATGACGAGCGCCGCGGGCACAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCA                                                            >  5:24838/1‑133                                                                                                                CCGCCTGCGCAAGAGCATGACGAGCGCCGCGGGCACAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCA                                                            <  6:24838/133‑1                                                                                                                 CGCCTGCGCAAGAGCATGACGAGCGCCGCGGGCACAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGTCGTACGGG                                           <  6:316973/149‑1                                                                                                                                                   CAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGTCGTACGGGCACCTCTAGCGCCTGAGCGAAACGCACGTCGAAC         <  7:275773/149‑1                                                                                                                                                   CAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGTCGTACGGGCACCTCTAGCGCCTGAGCGAAACGCACGTCGAAC         <  8:192757/149‑1                                                                                                                                                    AGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGTCGTACGGGCACCTCTAGCGCCTGAGCGAAACGCACGTCGAACC        <  4:202535/149‑1                                                                                                                                                    AGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGTCGTACGGGCACCTCTAGCGCCTGAGCGAAACGCACGTCGAAC         >  5:358726/1‑148                                                                                                                                                     GGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGTCGTACGGGCACCTCTAGCGCCTGAGCGAAACGCACGTCGAACCA       <  4:150488/149‑1                                                                                                                                                        GGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGTCGTACGGGCACCTCTAGCGCCTGAGCGAAACGCACGTCGAACCAGAT    >  2:97811/1‑149                                                                                                                                                        GGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGTCGTACGGGCACCTCTAGCGCCTGAGCGAAACGCACGTCGAACCAGAT    >  6:114175/1‑149                                                                                                                                                          GCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGTCGTACGGGCACCTCTAGCGCCTGAGCGAAACGCACGTCGAACCAGATGC  >  3:174823/1‑149                                                                                                                                                                                                                                                                                                                GTGCCCGTACGACTGGTTGCTGCACGCAGCGCCCCCCTGATTGCCCAGGCCGACTGCCACGGCGGTACGCTGCAGGCGCCAGCCCACTACCAGCTTCACTGCGTCGAAAGCCCGCCTGCGCAAGAGCATGACGAGCGCCGCGGGCACAGGCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/329114‑328961 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggcgggCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGTCGTACGGGCACCTCTAGCGCCTGAGCGAAACGCACGTCGAACCAGATGC  >  NC_002947/329005‑329152

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.