New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	328961 =	56 (0.990)	4 (0.080)	3/242	NT	6.3%	coding (289/1368 nt)	PP_0270	sensor histidine kinase
	?	NC_002947	329005 =	67 (1.260)					coding (245/1368 nt)	PP_0270	sensor histidine kinase

CGATCGGCTGGCCCAGCTCGTCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGT‑GCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGTCGTACGGGCACCTCTAGCGCCTGAGCGAAACGCACGTCGAACCAGATGC  >  NC_002947/328859‑329152                                                                                                                                                    |                                                                                                                                                    cGATCGGCTGGCCCAGCTCGTCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGT‑GCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCtt                                                                                                                                                   <  5:167860/149‑1 (MQ=255)    tCGGCTGGCCCAGCTCGTCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGT‑GCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCg                                                                                                                                                <  6:359290/149‑1 (MQ=255)      ggCTGGCCCAGCTCGTCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGT‑GCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGa                                                                                                                                               <  2:159728/148‑1 (MQ=255)        cTGGCCCAGCTCGTCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGT‑GCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACg                                                                                                                                             >  3:312844/1‑148 (MQ=255)        cTGGCCCAGCTCGTCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGT‑GCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGc                                                                                                                                            <  5:159056/149‑1 (MQ=255)            cccAGCTCGGCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGTCCTGCTGCAACAACAGCTCGACCCGCCTGT‑GCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTg                                                                                                                                        <  6:366438/149‑1 (MQ=255)             ccAGCTCGTCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGT‑GCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTg                                                                                                                                        >  4:2937/1‑148 (MQ=255)             ccAGCTCGTCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGT‑GCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGa                                                                                                                                       <  3:2937/149‑1 (MQ=255)                 cTCGTCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGT‑GCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCt                                                                                                                                   <  6:301930/149‑1 (MQ=255)                  tcgtcgGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGT‑GCCCGCGGCGCTCGTCATGCTCTTACGCAGGCGGGCTTTCGACGCAGTGAAGCTg                                                                                                                                  >  7:36219/1‑149 (MQ=255)                        gTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGT‑GCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGc                                                                                                                                    >  5:81425/1‑141 (MQ=255)                        gTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGT‑GCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGc                                                                                                                                    <  6:81425/141‑1 (MQ=255)                          gAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGT‑GCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTgg                                                                                                                                 <  8:157005/142‑1 (MQ=255)                          gAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGT‑GCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTgg                                                                                                                                 >  7:157005/1‑142 (MQ=255)                          gAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGT‑GCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTgg                                                                                                                                 <  8:152275/142‑1 (MQ=255)                          gAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGT‑GCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAgatcg                                                                                                                          >  7:152275/1‑145 (MQ=255)                            gTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGT‑GCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCt                                                                                                                        >  1:91248/1‑149 (MQ=255)                             ttGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGT‑GCCAGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTg                                                                                                                       >  7:192757/1‑149 (MQ=255)                             ttGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTAGACCCGCCTGT‑GCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTg                                                                                                                       >  5:331700/1‑149 (MQ=255)                                  cGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGT‑GCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGcc                                                                                                                  <  4:312844/149‑1 (MQ=255)                                     gCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGT‑GCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGt                                                                                                                             >  2:104465/1‑135 (MQ=255)                                     gCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGT‑GCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGt                                                                                                                             <  1:104465/135‑1 (MQ=255)                                       aTCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGT‑GCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGATGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAg                                                                                                             <  1:224117/149‑1 (MQ=255)                                        tCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGT‑GCCCGCGGCGCTCGCCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTgg                                                                                                                           >  3:332270/1‑134 (MQ=255)                                        tCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGT‑GCCCGCGGCGCTCGCCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTgg                                                                                                                           <  4:332270/134‑1 (MQ=255)                                           ggCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGT‑GCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTa                                                                                                         >  3:30540/1‑149 (MQ=255)                                                   tCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGT‑GCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTg                                                                                                 >  8:275773/1‑149 (MQ=255)                                                    ccTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGT‑GCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTgg                                                                                                >  3:323557/1‑149 (MQ=255)                                                      tGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTAGACCCGCCTGT‑GCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTgg                                                                                                >  3:150488/1‑147 (MQ=255)                                                         gCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGTAGCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGt                                                                                            >  1:98143/1‑149 (MQ=255)                                                          cATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGT‑GCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCg                                                                                          <  3:90388/149‑1 (MQ=255)                                                                      cGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGT‑GCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAAt                                                                               >  4:350283/1‑148 (MQ=255)                                                                           ttCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGT‑GCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAggg                                                                          >  4:164587/1‑148 (MQ=255)                                                                             cAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGT‑GCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAggg                                                                          <  3:164587/146‑1 (MQ=255)                                                                               gggCCTGCTGCAACAACAGCTCGACCCGCCTGT‑GCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCt                                                                                      <  3:17997/132‑1 (MQ=255)                                                                               gggCCTGCTGCAACAACAGCTCGACCCGCCTGT‑GCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCt                                                                                      >  4:17997/1‑132 (MQ=255)                                                                                      ctgcAACAACAGCTCGACCCGCCTGT‑GCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGt                                                               <  4:30540/148‑1 (MQ=255)                                                                                         caacaaCAGCTCGACCCGCCTGT‑GCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTgcag                                                           >  3:202535/1‑149 (MQ=255)                                                                                         caacaaCAGCTCGACCCGCCTGT‑GCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTgc                                                             <  2:98143/147‑1 (MQ=255)                                                                                           acaacaGCTCGACCCGCCTGT‑GCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTgcagc                                                          >  6:29292/1‑148 (MQ=255)                                                                                             aacaGCTCGACCCGCCTGT‑GCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAAc                                                       <  8:142221/149‑1 (MQ=255)                                                                                               caGCTCGACCCGCCTGT‑GCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTgcag                                                           >  6:128893/1‑143 (MQ=255)                                                                                               caGCTCGACCCGCCTGT‑GCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTgcag                                                           <  5:128893/143‑1 (MQ=255)                                                                                                  cTCGACCCGCCTGT‑GCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCg                                                                <  6:344144/135‑1 (MQ=255)                                                                                                  cTCGACCCGCCTGT‑GCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCg                                                                >  5:344144/1‑135 (MQ=255)                                                                                                     gACCCGCCTGT‑GCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGTCGTa                                               >  3:222389/1‑149 (MQ=255)                                                                                                         ccgcctgcgcaagagcatgacgagcgccgcgggcacaggcgggCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTgca                                                            >  5:24838‑M2/44‑133 (MQ=255)                                                                                                         ccgcctgcgcaagagcatgacgagcgccgcgggcacaggcgggCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTgca                                                            <  6:24838‑M2/90‑1 (MQ=255)                                                                                                         ccgcctgcgcaagagcatgacgagcgccgcgggcacaggcgggCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGTCGTACgg                                            >  5:316973‑M2/44‑149 (MQ=255)                                                                                                          cgcctgcgcaagagcatgacgagcgccgcgggcacaggcgggCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGTCGTACggg                                           <  6:316973‑M2/107‑1 (MQ=255)                                                                                                          GCCTGT‑GCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGTCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGTCGTACggg                                           <  3:54947‑M1/148‑1 (MQ=255)                                                                                                          GCCTGT‑GCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGTCGTACggg                                           <  6:304031‑M1/148‑1 (MQ=255)                                                                                                            CTGT‑GCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGTCGTACGGGCAc                                        >  4:292785‑M1/1‑149 (MQ=255)                                                                                                                  cccGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCa                                                                                                              <  7:282562/74‑1 (MQ=255)                                                                                                                  cccGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCa                                                                                                              >  8:282562/1‑74 (MQ=255)                                                                                                                  cccGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGTCGTACGGGCACctct                                    <  5:29292/148‑1 (MQ=255)                                                                                                                   ccGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCg                                                                                          <  4:162861/93‑1 (MQ=255)                                                                                                                   ccGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCg                                                                                          >  3:162861/1‑93 (MQ=255)                                                                                                                    cgcgGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGTCGTACGGGCACCTCTAgc                                 <  3:288949/149‑1 (MQ=255)                                                                                                                          gcTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGTCGTACGGGCACCTCTAgc                                 <  7:290799/143‑1 (MQ=255)                                                                                                                          gcTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGTCGTACGGGCACCTCTAgc                                 >  8:290799/1‑143 (MQ=255)                                                                                                                          gcTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGTCGTACGGGCACCTCTAGCGCCTGa                           <  4:323557/149‑1 (MQ=255)                                                                                                                           cTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGTCGTACGGGCACCTCTAGCGCCTGAg                          >  7:16346/1‑149 (MQ=255)                                                                                                                            tCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGc                                                                                        <  8:119489/86‑1 (MQ=255)                                                                                                                              gTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCTATCAGGGGGGCGCTGc                                                                 <  8:125897/107‑1 (MQ=255)                                                                                                                              gTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGt                                                   >  5:213792/1‑121 (MQ=255)                                                                                                                              gTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGt                                                   <  6:213792/121‑1 (MQ=255)                                                                                                                              gTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGTCGTACGGGCACCTCTAGCGCCTGAGCg                        <  5:304031/148‑1 (MQ=255)                                                                                                                              gTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGGTCAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCGGCGTGCAGCAACCAGTCGTACGGGCACCTCTAGCGCCTGAGc                         <  8:175876/147‑1 (MQ=255)                                                                                                                                 aTGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGTCGTACGGGCACCTCTAGCGCCTGAGCGaaa                     <  2:91248/148‑1 (MQ=255)                                                                                                                                 aTGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGTCGTACGGGCACCTCTAGCGCCTGAGCGAAAc                    >  6:53442/1‑149 (MQ=255)                                                                                                                                 aTGCTCTTACGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGTCGTACGGGCACCTCTAGCGCCTGAGCGaaa                     <  8:36219/148‑1 (MQ=255)                                                                                                                                     tctTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGTCGTACGGGCACCTCTAGCGCCTGAGCGAAACGCAc                >  6:327238/1‑149 (MQ=255)                                                                                                                                     tctTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGTCGTACGGGCACCTCTAGCGCCTGAGCGAAACGCAc                >  5:190034/1‑149 (MQ=255)                                                                                                                                     tctTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGTCGTACGGGCACCTCTAGCGCCTGAGCGAAACGCAc                >  1:262806/1‑149 (MQ=255)                                                                                                                                       ttGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGTCGTACGGGCACCTCTAGCGCCTGAGAGAAACGCACGt              >  3:108400/1‑149 (MQ=255)                                                                                                                                          cgcAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGTCGTACGGGCACCTCTAGCGCCTGAGCGAAACGCACGTCg            >  3:336355/1‑148 (MQ=255)                                                                                                                                            caggcgggCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGTCGTACGGGCACCTCTAGCGCCTGAGCGAAACGCACGTCGAAc         <  7:275773‑M2/141‑1 (MQ=255)                                                                                                                                            caggcgggCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGTCGTACGGGCACCTCTAGCGCCTGAGCGAAACGCACGTCGAAc         <  8:192757‑M2/141‑1 (MQ=255)                                                                                                                                             aggcgggCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGTCGTACGGGCACCTCTAGCGCCTGAGCGAAACGCACGTCGAAcc        <  4:202535‑M2/142‑1 (MQ=255)                                                                                                                                             aggcgggCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGTCGTACGGGCACCTCTAGCGCCTGAGCGAAACGCACGTCGAAc         >  5:358726‑M2/8‑148 (MQ=255)                                                                                                                                              ggcgggCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGTCGTACGGGCACCTCTAGCGCCTGAGCGAAACGCACGTCGAACCa       <  4:150488‑M2/143‑1 (MQ=255)                                                                                                                                                 gggCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGTCGTACGGGCACCTCTAGCGCCTGAGCGAAACGCACGTCGAACCAGAt    >  6:114175‑M2/4‑149 (MQ=255)                                                                                                                                                 gggCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGTCGTACGGGCACCTCTAGCGCCTGAGCGAAACGCACGTCGAACCAGAt    >  2:97811‑M2/4‑149 (MQ=255)                                                                                                                                                   gCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGTCGTACGGGCACCTCTAGCGCCTGAGCGAAACGCACGTCGAACCAGATGc  >  3:174823‑M2/2‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                    CGATCGGCTGGCCCAGCTCGTCGGTGAGTTGCACGTGCATCAGGCGTACGTCCTGGGCATGCCCCAGCTCGTACTTCAGGGCCTGCTGCAACAACAGCTCGACCCGCCTGT‑GCCCGCGGCGCTCGTCATGCTCTTGCGCAGGCGGGCTTTCGACGCAGTGAAGCTGGTAGTGGGCTGGCGCCTGCAGCGTACCGCCGTGGCAGTCGGCCTGGGCAATCAGGGGGGCGCTGCGTGCAGCAACCAGTCGTACGGGCACCTCTAGCGCCTGAGCGAAACGCACGTCGAACCAGATGC  >  NC_002947/328859‑329152

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.