New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 536944	55 (0.970)	3 (0.060)	3/244	NT	5.2%	coding (486/501 nt)	rplJ	50S ribosomal protein L10
	?	NC_002947	= 536969	58 (1.080)					intergenic (+10/‑68)	rplJ/rplL	50S ribosomal protein L10/50S ribosomal protein L7/L12

TGACGGCAATTTCATTGCAGCGAACCAGATCGACGTGTTGGCTACCCTGCCGACCCGCGACGAAGCTATTGCACGACTGATGAGCGTTATTCAAGGCGCCACCAGCAAGCTGGCTCGTACTCTGGCAGCCATTCGCGACCAGAAAGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/536797‑536944 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaaagaaTTCGCGCGCCTTAGGCGGCGGTAGCTTCTTTCTGGTCGCGAATGGCTGCCAGAGTACGAGCCAGCTTGCTGGTGGCGCCTTGAATAACGCTCATCAGTCGTGCAATAGCTTCGTCGCGGGTCGGCAGGGTAGCCAACACGTCGATC  <  NC_002947/536969‑536824                                                                                                                                                                                                                                                                                                        TGACGGCAATTTCATTGCAGCGAACCAGATCGACGTGTTGGCTACCCTGCCGACCCGCGACGAAGCTATTGCACGACTGATGAGCGTTATTCAAGGCGCCACCAGCAAGCTGGCTCGTACTCTGGCAGCCATTCGCGACCAGAAAGAA                                                                                                                                                    <  6:133630/148‑1                                     GTTGGCTACCCTGCCGACCCGCGACGAAGCTATTGCACGACTGATGAGCGTTATTCAAGGCGCCACCAGCAAGCTGGCTCGTACTCTGGCAGCCATTCGCGACCAGAAAGAATTCGCGCGCCTTAGGCGGCGGTAGCTTCTTTCTGGTC                                                                                                               <  3:284416/149‑1                                                                                                     ACCAGCAAGCTGGCTCGTACTCTGGCAGCCATTCGCGACCAGAAAGAATTCGCGCGCCTTAGGCGGCGGTAGCTTCTTTCTG                                                                                                                  >  7:221721/1‑82                                                                                                     ACCAGCAAGCTGGCTCGTACTCTGGCAGCCATTCGCGACCAGAAAGAATTCGCGCGCCTTAGGCGGCGGTAGCTTCTTTCTG                                                                                                                  <  8:221721/82‑1                                                                                                                                                  GAATTCGCGCGCCTTAGGCGGCGGTAGCTTCTTTCTGGTCGCGAATGGCTGCCAGAGTACGAGCCAGCTTGCTGGTGGCGCCTTGAATAACGCTCATCAGTCGTGCAATAGCTTCGTCGCGGGTCGGCAGGGTAGCCAACACGTCGATC  <  8:160363/149‑1                                                                                                                                                                                                                                                                                                        TGACGGCAATTTCATTGCAGCGAACCAGATCGACGTGTTGGCTACCCTGCCGACCCGCGACGAAGCTATTGCACGACTGATGAGCGTTATTCAAGGCGCCACCAGCAAGCTGGCTCGTACTCTGGCAGCCATTCGCGACCAGAAAGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/536797‑536944 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaaagaaTTCGCGCGCCTTAGGCGGCGGTAGCTTCTTTCTGGTCGCGAATGGCTGCCAGAGTACGAGCCAGCTTGCTGGTGGCGCCTTGAATAACGCTCATCAGTCGTGCAATAGCTTCGTCGCGGGTCGGCAGGGTAGCCAACACGTCGATC  <  NC_002947/536969‑536824

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.