New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 536944	55 (0.970)	3 (0.060)	3/244	NT	5.2%	coding (486/501 nt)	rplJ	50S ribosomal protein L10
	?	NC_002947	= 536969	58 (1.080)					intergenic (+10/‑68)	rplJ/rplL	50S ribosomal protein L10/50S ribosomal protein L7/L12

GATCGACGTGTTGGCTACCCTGCCGACCCGCGACGAAGCTATTGCACGACTGATGAGCGTTATTCAAGGCGCCACCAGCAAGCTGGCTCGTACTCTGGCAGCCATTCGCGACCAGAAAGAAGCTACCGCCGCCTAAGGCGCGCGAATTCTTTCAAAATCATACGTTTAATTTGATGGCTGCGTAGGCTGTCACCCCAAT‑ACAGGATTTAAGTCATGTCTCTGACTAACGAACAAATCATCGAAGCAATCGGCCAGAAAACCGTTCTGGAAGTTGTTGAGCTGATCAAAGCAA  >  NC_002947/536824‑537115                                                                                                                                                  |                                                                                                                                                    gATCGACGTGTTGGCTACCCTGCCGACCCGCGACGAAGCTATTGCACGACTGATGAGCGTTATTCAAGGCGCCACCAGCAAGCTGGCTCGTACTCTGGCAGCCATTCGCGACCAGAAAGAAGCTACCGCCGCCTAAGGCGCGCGAAttc                                                                                                                                                  <  8:160363‑M2/149‑4 (MQ=255)         ttttGGCTACCCTGCCGACCCGCGACGAAGCTATTGCACGACTGATGAGCGTTATTCAAGGCGCCACCAGCAAGCTGGCTCGTACTCTGGCAGCCATTCGCGACCAGAAAGAAGCTACCGCCGCCTAAGGCGCGCGAATTCTTTCaaaa                                                                                                                                          <  1:305879/147‑1 (MQ=255)         tgtTGGCTACCCTGCCGACCCGCGACGAAGCTATTGCACGACTGATGAGCGTTATTCAAGGCGCCACCAGCAAGCTGGCTCGTACTCTGGCAGCCATTCGCGACCAGAAAGAAGCTACCGCCGCCTAAGGCGCGCGAATTCTTTCaaaa                                                                                                                                          <  2:167450/149‑1 (MQ=255)           ttGGCTACCCTGCCGACCCGCGACGAAGCTATTGCACGACTGATGAGCGTTATTCAAGGCGCCACCAGCAAGCTGGCTCGTACTCTGGCAGCCATTCGCGACCAGAAAGAAGCTACCGCCGCCTAAGGCGCGCGAATTCTTTCAAAATc                                                                                                                                        <  5:201935/149‑1 (MQ=255)             ggCTACCCTGCCGACCCGCGACGAAGCTATTGCACGACTGATGAGCGTTATTCAAGGCGCCACCAGCAAGCTGGCTCGTACTCTGGCAGCCATTCGCGACCAGAAAGAAGCTACCGCCGCCTAAGGCGCGCGAATTCTTTCAAAATCa                                                                                                                                       >  5:197182/1‑148 (MQ=255)               cTACCCTGCCGACCCGCGACGAAGCTATTGCACGACTGATGAGCGTTATTCAAGGCGCCACCAGCAAGCTGGCTCGTACTCTGGCAGCCATTCGCGACCAGAAAGAAGCTACCGCCGCCTAAGGCGCGCGAATTCTTTCAAAATCATAc                                                                                                                                    <  4:264049/149‑1 (MQ=255)                tACCCTGCCGACCCGCGACGAAGCTATTGCACGACTGATGAGCGTTATTCAAGGCGCCACCAGCAAGCTGGCTCGTACTCTGGCAGCCATTCGCGACCAGAAAGAAGCTACCGCCGCCTAAGGCGCGCGAATTCTTTCAAAATCATACg                                                                                                                                   >  8:171300/1‑149 (MQ=255)                tACCCTGCCGACCCGCGACGAAGCTATTGCACGACTGATGAGCGTTATTCAAGGCGCCACCAGCAAGCTGGCTCGTACTCTGGCAGCCATTCGCGACCAGAAAGAAGCTACCGCCGCCTAAGGCGCGCGAATTCTTTCAAAATCATACg                                                                                                                                   >  1:15327/1‑149 (MQ=255)                 aCCCTGCCGACCCGCGACGAAGCTATTGCACGACTGATGAGCGTTATTCAAGGCGCCACCAGCAAGCTGGCTCGTACTCTGGCAGCCATTCGCGACCAGAAAGAAGCTACCGCCGCCTAAGGCGCGCGAATTCTTTCAAAATCATACGt                                                                                                                                  >  4:265940/1‑149 (MQ=255)                          aCCCGCGACGAAGCTATTGCACGACTGATGAGCGTTATTCAAGGCGCCACCAGCAAGCTGGCTCGTACTCTGGCAGCCATTCGCGACCAGAAAGAAGCTACCGCCGCCTAAGGCGCGCGAATTCTTTCAAAATCATACGTTTAATTTGa                                                                                                                         <  6:126955/149‑1 (MQ=255)                            ccGCGACGAAGCTATTGCACGCCTGATGAGCGTTATTCAAGGCGCCACCAGCAAGCTGGCTCGTACTCTGGCAGCCATTCGCGACCAGAAAGAAGCTACCGCCGCCTAAGGCGCGCGAAATCTTTCAAAATCATACGTTTAATTTGATg                                                                                                                       <  6:78945/149‑1 (MQ=255)                            ccGCGACGAAGCTATTGCACGACTGATGAGCGTTATTCAAGGCGCCACCAGCAAGCTGGCTCGTACTCTGGCAGCCATTCGCGACCAGAAAGAAGCTACCGCCGCCTAAGGCGCGCGAATTCTTTCAAAATCATACGTTTAATTTGATg                                                                                                                       >  4:271844/1‑149 (MQ=255)                                   gaAGCTATTGCACGACTGATGAGCGTTATTCAAGGCGCCACCAGCAAGCTGGCTCGTACTCTGGCAGCCATTCGCGACCAGAAAGAAGCTACCGCCGCCTAAGGCGCGCGAATTCTTTCAAAATCATACGTTTAATTTGATGGCTGCGt                                                                                                                <  3:265940/149‑1 (MQ=255)                                     aGCTATTGCACGACTGATGAGCGTTATTCAAGGCGCCACCAGCAAGCTGGCTCGTACTCTGGCAGCCATTCGCGACCAGAAAGAAGCTACCGCCGCCTAAGGCGCGCGAATTCTTTCAAAATCATACGTTTAATTTGATGGCTGCGTAg                                                                                                              <  7:160363/149‑1 (MQ=255)                                      gCTATTGCACGACTGATGAGCGTTATTCAAGGCGCCACCAGCAAGCTGGCTCGTACTCTGGCAGCCATTCGCGACCAGAAAGAAGCTACCGCCGCCTAAGGCGCGCGAATTCTTTCAAAATCATACGTTTAAttt                                                                                                                           <  5:171742/135‑1 (MQ=255)                                      gCTATTGCACGACTGATGAGCGTTATTCAAGGCGCCACCAGCAAGCTGGCTCGTACTCTGGCAGCCATTCGCGACCAGAAAGAAGCTACCGCCGCCTAAGGCGCGCGAATTCTTTCAAAATCATACGTTTAAttt                                                                                                                           >  6:171742/1‑135 (MQ=255)                                               cGACTGATGAGCGTTATTCAAGGCGCCACCAGCAAGCTGGCTCGTACTCTGGCAGCCATTCGCGACCAGAAAGAAGCTACCGCCGCCTAAGGCGCGCGAATTCTTTCAAAATCATACGTTTAATTTGATGGCTGCGTAGGCTGTCAccc                                                                                                    <  6:197182/149‑1 (MQ=255)                                                          cGTTATTCAAGGCGCCACCAGCAAGCTGGCTCGTACTCTGGCAGCCATTCGCGACCAGAAAGAAGCTACCGCCGCCTAAGGCGCGCGAATTCTTTCAAAATCATACGTTTAATTTGAt                                                                                                                        >  1:52549/1‑118 (MQ=255)                                                          cGTTATTCAAGGCGCCACCAGCAAGCTGGCTCGTACTCTGGCAGCCATTCGCGACCAGAAAGAAGCTACCGCCGCCTAAGGCGCGCGAATTCTTTCAAAATCATACGTTTAATTTGAt                                                                                                                        <  2:52549/118‑1 (MQ=255)                                                          cGTTATTCAAGGCGCCACCAGCAAGCTGGCTCGTACTCTGGCAGCCATTCGCGACCAGAAAGAAGCTACCGCCGCCTAAGGCGCGCGAATTCTTTCAAAATCATACGTTTAATTTGATGGCTGCGTAGGCTGTCACCCCAAT‑ACAGGAt                                                                                        >  6:191604/1‑149 (MQ=255)                                                            ttATTCAAGGCGCCACCAGCAAGCTGGCTCGTACTCTGGCAGCCATTCGCGACCAGAAAGAAGCTACCGCCGCCTAAGGCGCGCGAATTCTTTCAAAATCATACGTTTAATTTGATGGCTGCGTAGGCTGTCACCCCAAT‑ACAGGAtt                                                                                       >  2:140143/1‑148 (MQ=255)                                                            ttATTCAAGGCGCCACCAGCAAGCTGGCTCGTACTCTGGCAGCCATTCGCGACCAGAAAGAAGCTACCGCCGCCTAAGGCGCGCGAATTCTTTCAAAATCATACGTTTAATTTGATGGCTGCGTAGGCTGTCACCCCAAT‑ACAGGAtt                                                                                       >  4:161072/1‑148 (MQ=255)                                                               ttCAAGGCGCCACCAGCAAGCTGGCTCGTACTCTGGCAGCCATTCGCGACCAGAAAGAAGCTACCGCCGCCTAAGGCGCGCGAATTCTTTCAAAATCATACGTTTAATTTGATGGCTGCGTAGGCTGTCACCCCAAT‑ACAGGATTTaa                                                                                    <  2:15327/148‑1 (MQ=255)                                                               ttCAAGGCGCCACCAGCAAGCTGGCTCGTACTCTGGCAGCCATTCGCGACCAGAAAGAAGCTACCGCCGCCTAAGGCGCGCGAATTCTTTCAAAATCATACGTTTAATTTGATGGCTGCGTAGGCTGTCACCCCAAT‑ACAGGATTTAAg                                                                                   >  3:184870/1‑149 (MQ=255)                                                               ttCAAGGCGCCACCAGCAAGCTGGCTCGTACTCTGGCAGCCATTCGCGACCAGAAAGAAGCTACCGCCGCCTAAGGCGCGCGAATTCCTTCAAAATCATACGTTTAATTTGATGGCTGCGTAGGCTGTCACCCCAAT‑ACAGGATTTaa                                                                                    <  6:44300/148‑1 (MQ=255)                                                                     gcgcCACCAGCAAGCTGGCTCGTACTCTGGCAGCCATTCGCGACCAGAAAGAAGCTACCGCCGCCTAAGGCGCGCGAATTCTTTCAAAATCATACGTTTAATTTGATGGCTGCGTAGGCTGTCACCCCAAT‑ACAGGATTTAAGTCATGt                                                                             <  7:171300/149‑1 (MQ=255)                                                                     gccccaccaGCAAGCGGGCTCGTACTCTGGCAGCCATTCGCGACCAGAAAGAAGCTACCGCCGCCTAAGGCGCGCGAATTCTTTCAAAATCATACGTTTAATTTGATGGCTGCGTAGGCTGTCACCCCAAT‑ACAGGATTTAAGTCATGt                                                                             <  4:66877/146‑1 (MQ=255)                                                                       gcCACCAGCAAGCTGGCTCGTACTCTGGCAGCCATTCGCGACCAGAAAGAAGCTACCGCCGCCTAAGGCGCGCGAATTCTTTCAAAATCATACGTTTAATTTGATGGCTGCGTAGGCTGTCACCCCAAT‑ACAGGATTTAAGTCATGtct                                                                           >  4:309938/1‑149 (MQ=255)                                                                       gcCACCAGCAAGCTGGCTCGTACTCTGGCAGCCATTCGCGACCAGAAAGAAGCTACCGCCGCCTAAGGCGCGCGAATTCTTTCAAAATCATACGTTTAATTTGATGGCTGCGTAGGCTGTCACCCCAAT‑ACAGGATTTAAGTCATGtct                                                                           >  2:107902/1‑149 (MQ=255)                                                                        ccaccaGCAAGCTGGCTCGTACTCTGGCAGCCATTCGCGACCAGAAAGAAGCTACCGCCGCCTAAGGCGCGCGAATTCTTTCAAAATCATACGTTTAATTTGATGGCTGCGTAGGCTGTCACCCCAAT‑ACAGGATTTAAGTCATGtctc                                                                          >  6:322628/1‑149 (MQ=255)                                                                         caccaGCAAGCTGGCTCGTACTCTGGCAGCCATTCGCGACCAGAAAGAAGCTACCGCCGCCTAAGGCGCGCGAATTCTTTCAAAATCATACGTTTAATTTGATGGCTGCGTAGGCTGTCACCCCAAT‑ACAGGATTTAAGTCATGTctct                                                                         >  3:161149/1‑149 (MQ=255)                                                                                aaGCTGGCTCGTACTCTGGCAGACATTCGCGACCAGAAAGAAGCTACCGCCGCCTAAGGCGCGCGAATTCTTTCAAAATCATACGTTTAATTTGATGGCTGCGTAGGCTGTCACCCCAAT‑ACAGGATTTAAGTCATGTCTCTGACTAAc                                                                  <  3:271844/149‑1 (MQ=255)                                                                                     ggCTCGTACTCTGGCAGCCATTCGCGACCAGAAAGAAGCTACCGCCGCCTAAGGCGCGCGAATTCTTTCAAAATCATACGTTTAATTTGATGGCTGCGTAGGCTGTCACCCCAAT‑ACAGGATTTAAGTCATGTCTCTGACTAACGAAc                                                              >  8:45972/1‑148 (MQ=255)                                                                                          gTACTCTGGCAGCCATTCGCGACCAGAAAGAAGCTACCGCCGCCTAAGGCGCGCGAATTCTTTCAAAATCATACGTTTAATTTGATGGCTGCGTAGGCTGTCACCCCAAT‑ACAGGATTTAAGTCATGTCTCTGACTAACGAACAAatca                                                        >  5:40386/1‑149 (MQ=255)                                                                                            aCTCTGGCAGCCATTCGCGACCAGAAAGAAGCTACCGCCGCCTAAGGCGCGCGAATTCTTTCAAAATCATACGTTTAATTTGAt                                                                                                                        <  8:188239/84‑1 (MQ=255)                                                                                            aCTCTGGCAGCCATTCGCGACCAGAAAGAAGCTACCGCCGCCTAAGGCGCGCGAATTCTTTCAAAATCATACGTTTAATTTGAt                                                                                                                        >  7:188239/1‑84 (MQ=255)                                                                                             ctctGGCAGCCATTCGCGACCAGAAAGAAGCTACCGCCGCCTAAGGCGCGCGAATTCTTTCAAAATCATACGTTTAATTTGATGGCTGCGTAGGCTGTCACCCCAAT‑ACAGGATTTAAGTCATGTCTCTGACTAACGAACAAATCATCg                                                     <  1:140143/149‑1 (MQ=255)                                                                                                tGGCAGCCATTCGCGACCAGAAAGAAGCTACCGCCGCCTAAGGCGCGCGAATTCTTTCAAAATCATACGTTTAATTTGAt                                                                                                                        <  1:234257/80‑1 (MQ=255)                                                                                                tGGCAGCCATTCGCGACCAGAAAGAAGCTACCGCCGCCTAAGGCGCGCGAATTCTTTCAAAATCATACGTTTAATTTGAt                                                                                                                        >  2:234257/1‑80 (MQ=255)                                                                                                  gCAGCCATTCGCGACCAGAAAGAAGCTACCGCCGCCTAAGGCGCGCGAATTCTTTCAAAATCATACGTTTAATTTGATGGCTGCGTAGGCTGTCACCCCAAT‑ACAGGATTTAAGTCATGTCTCTGACTAACGAACAAATCATCGaa                                                   <  5:191604/146‑1 (MQ=255)                                                                                                  gCAGCCATTCGCGACCAGAAAGAAGCTACCGCCGCCTAAGGCGCGCGAATTCTTTCAAAATCATACGTTTAATTTGATGGCTGCGTAGGCTGTCACCCCAAT‑ACAGGATTTAAGTCATGTCTCTGACTAACGAACAAATCATCGaa                                                   <  5:322628/146‑1 (MQ=255)                                                                                                  gCAGCCATTCGCGACCAGAAAGAAGCTACCGCCGCCTAAGGCGCGCGAATTCTTTCAAAATCATACGTTTAATTTGATGGCTGCGTAGGCTGTCACCCCAAT‑ACAGGATTTAAGTCATGTCTCTGACTAACGAACAAATCATCGAAg                                                  <  4:184870/147‑1 (MQ=255)                                                                                                          cctatctcAGAAAGAAGCTACCGCGGCCTAAGTCGCGAGATTTCATTCAAAATCATACGTTTAATTTGATGGCTGCGTAGGCTGTCACCCCAAT‑ACAGGATTTTAGTCATGTCTCTGACTAACGAACAAATCATCGAAGCAATCGGcc                                         <  7:90804/141‑1 (MQ=255)                                                                                                              gACCAGAAAGAAGCTACCGCCGCCTAAGGCGCGCGAAttctttctggtcgcgaatggctgccagagtacgagccagcttgctggtggcgccttgaataacgctcatcagtcgtgcaatagcttcgtcgcgggtcggcagggtagccaac                                     <  3:284416‑M2/149‑113 (MQ=255)                                                                                                              gACCAGAAAGAAGCTACCGCCGCCTAAGGCGCGCGAATTCTTTCAAAATCATACGTTTAATTTGATGGCTGCGTAGGCTGTCACCCCAAT‑ACAGGATTTAAGTCATGTCTCTGACTAACGAACAAATCATCGAAGCAATCGGCCAGaa                                     >  2:349681/1‑148 (MQ=255)                                                                                                                 cAGAAAGAAGCTACCGCCGCCTAAGGCGCGCGAAttctttctggtcgcgaatggctgccagagtacgagccagcttgctggt                                                                                                     <  8:221721‑M2/82‑49 (MQ=255)                                                                                                                 cAGAAAGAAGCTACCGCCGCCTAAGGCGCGCGAAttctttctggtcgcgaatggctgccagagtacgagccagcttgctggt                                                                                                     >  7:221721‑M2/1‑34 (MQ=255)                                                                                                                   gaaagaaGCTACCGCCGCCTAAGGCGCGCGAATTCTTTCAAAATCATACGTTTAATTTGATGGCTGCGTAGGCTGTCACCCCAAT‑ACAGGATTTAAGTCATGTCTCTGACTAACGAACAAATCATCGAAGCAATCgg                                           >  4:331882/1‑137 (MQ=255)                                                                                                                   gaaagaaGCTACCGCCGCCTAAGGCGCGCGAATTCTTTCAAAATCATACGTTTAATTTGATGGCTGCGTAGGCTGTCACCCCAAT‑ACAGGATTTAAGTCATGTCTCTGACTAACGAACAAATCATCGAAGCAATCgg                                           <  3:331882/137‑1 (MQ=255)                                                                                                                     aagaagCTACCGCCGCCTAAGGCGCGCGAATTCTTTCAAAATCATACGTTTAATTTGATGGCTGCGTAGGCTGTCACCCCAAT‑ACAGGATTTAAGTCATGTCTCTGACTAACGAACAAATCATCGAAGCAATCGGCCAGAAAACCGTTc                             >  5:119230/1‑149 (MQ=255)                                                                                                                       taaagtACCGCCGCCTAACGCGCGCGTATTAATTTAAAATCATAAGTTTTAATTTATTGCAGCGTATGCTGTCACCCCAATAATTGGATTTAAGTCATGTCTCTGACTAACGAACAAATCATCGAAGCAATCGGCCAGAAAACCGTTCt                            <  1:107902/144‑1 (MQ=255)                                                                                                                         agCTACCGCCGCCTAAGGCGCGCGAATTCTTTCAAAATCATTCGTTTAATTTGATGGCTGCGTAGGATGTCACCCCAAT‑ACAGGAATTAAGTCATGTCTATGACTAAGGAACAAATCATCGAAGCAATCCTCCACTACACCGTTATgg                          >  6:269508/1‑148 (MQ=255)                                                                                                                          gCTACCGCCGCCTAAGGCGCGCGAATTCTTTCAAAATCATACGTTTAATTTGATGGCTGCGTAGGCTGTCACCCCAAT‑ACAGGATTTAAGTCATGTCTCTGACTAACGAACAAATCATCGAAGCAATCGGCCAGAAAACCGTTCTGGaa                        <  1:349681/149‑1 (MQ=255)                                                                                                                              ccgccgCCTAAGGCGCGCGAATTCTTTCAAAATCATACGTTTAATTTGATGGCTGCGTAGGCTGTCACCCCAAT‑ACAGGATTTAAGTCATGTCTCTGACTAACGAACAAATCATCGAAGCAATCGGCCAGAAAACCGTTCTGGAAgtt                     <  4:6158/148‑1 (MQ=255)                                                                                                                                gccgccTAAGGCGCGCGAATTCTTTCAAAATCATACGTTTAATTTGATGGCTGCGTAGGCTGTCACCCCAAT‑ACAGGATTTAAGTCATGTCTCTGACTAACGAACAAATCATCGAAGCAATCGGCCAGAAAACCGTTCTGGAAgttgtt                  <  6:344793/149‑1 (MQ=255)                                                                                                                                gccgccTAAGGCGCGCGAATTCTTTCAAAATCATACGTTTAATTTGATGGCTGCGTAGGCTGTCACCCCAAT‑ACAGGATTTAAGTCATGTCTCTGACTAACGAACAAATCATCGAAGCAATCGGCCAGAAAACCGTTCTGGAAgttgtt                  >  4:252242/1‑149 (MQ=255)                                                                                                                                gccgccTAAGGCGCGCGAATTCTTTCAAAATCATACGTTTAATTTGATGGCTGCGTAGGCTGTCACCCCAAT‑ACAGGATTTAAGTCATGTCTCTGACTAACGAACAAATCATCGAAGCAATCGGCCAGAAAACCGTTCTGGAAgttgtt                  <  3:161072/149‑1 (MQ=255)                                                                                                                                gccgccTAAGGCGCGCGAATTCTTTCAAAATCATACGTTTAATTTGATGGCTGCGTAGGCTGTCACCCCAAT‑ACAGGATTTAAGTCATGTCTCTGACTAACGAACAAATCATCGAAGCAATCGGCCAGAAAACCGTTCTGGAAgttgtt                  <  3:309938/149‑1 (MQ=255)                                                                                                                                    ccTAAGGCGCGCGAATTCTTTCAAAATCATACGTTTAATTTGATGGCTGCGTAGGCTGTCACCCCAAT‑ACAGGATTTAAGTCATGTCTCTGACTAACGAACAAATCATCGAAGCAATCGGCCAGAAAACCGTTCTGGAAgtt                     <  2:171726/142‑1 (MQ=255)                                                                                                                                    ccTAAGGCGCGCGAATTCTTTCAAAATCATACGTTTAATTTGATGGCTGCGTAGGCTGTCACCCCAAT‑ACAGGATTTAAGTCATGTCTCTGACTAACGAACAAATCATCGAAGCAATCGGCCAGAAAACCGTTCTGGAAgtt                     >  1:171726/1‑142 (MQ=255)                                                                                                                                     cTAAGGCGCGCGAATTCTTTCAAAATCATACGTTTAATTTGATGGCTGCGTAGGCTGTCACCCCAAT‑ACAGGATTTAAGTCATGTCTCTGACTAACGAACAAATCATCGAAGCAATCGGCCAGAAAACCGTTCTGGAAGTTGTTGAGCt             <  3:252242/149‑1 (MQ=255)                                                                                                                                     cTAAGGCGCGCGAATTCTTTCAAAATCATACGTTTAATTTGATGGCTGCGTAGGCTGTCACCCCAAT‑ACAGGATTTAAGTCATGTCTCTGACTAACGAACAAATCATCCAAGCAATCGGCCAGAAAACCGTACTCGAAGATGTTGAGcc             >  6:101317/1‑148 (MQ=255)                                                                                                                                        aGGCGCGCGAATTCTTTCAAAATCATACGTTTAATTTGATGGCTGCGTAGGCTGTCACCCCAAT‑ACAGGATTTAAGTCATGTCTCTGACTAACGAACAAATCATCGAAGCAATCGGCCAGAAAACCGTTCTGGAAGTTGTTGAGCTGa           <  4:161149/148‑1 (MQ=255)                                                                                                                                             cgcgAATTCTTTCAAAATCATACGTTTAATTTGATGGCTGCGTAGGCTGTCACCCCAAT‑ACAGGATTTAAGTCATTTCTATGACTAACGAACAAATCATCGAAGCAATCGGACAGAAAACAGTTATGGAAGTTGATGAGCTGATCa        >  3:96978/1‑146 (MQ=255)                                                                                                                                               cgAATTCTTTCAAAATCATACGTTTAATTTGATGGCTGCGTAGGCTGTCACCCCAAT‑ACAGGATTTAAGTCATGTCTCTGACTAACGAACAAATCATCGAAGCAATCGGCCAGAAAACCGTTCTGGAAGTTGTTGAGCTGATCAAAGc    >  6:525/1‑148 (MQ=255)                                                                                                                                                gAATTCTTTCAATATCATACTATTAATTTGATGGCTGCTTAGGCTGTCTCCCCAAT‑ACTGTATTTAAGTCTTGTCTCTGACTAACGAACAAATCTTCGAAGCAATCGGCCAGAAAAGCCTTCTCGAAGTTGTTGAGCTGATCAAAGCaa  <  5:269508/149‑1 (MQ=255)                                                                                                                                                gAATTCTTTCAAAATCATACGTTTAATTTGATGGCTGCGTAGGCTGTCACCCCAAT‑ACAGGATTTAAGTCATGTCTCTGACTAACGAACAAATCATCGAAGCAATCGGCCAGAAAACCGTTCTGGAAGTTGTTCAGCTGATCAAAGCaa  >  1:281567/1‑149 (MQ=255)                                                                                                                                                  |                                                                                                                                                    GATCGACGTGTTGGCTACCCTGCCGACCCGCGACGAAGCTATTGCACGACTGATGAGCGTTATTCAAGGCGCCACCAGCAAGCTGGCTCGTACTCTGGCAGCCATTCGCGACCAGAAAGAAGCTACCGCCGCCTAAGGCGCGCGAATTCTTTCAAAATCATACGTTTAATTTGATGGCTGCGTAGGCTGTCACCCCAAT‑ACAGGATTTAAGTCATGTCTCTGACTAACGAACAAATCATCGAAGCAATCGGCCAGAAAACCGTTCTGGAAGTTGTTGAGCTGATCAAAGCAA  >  NC_002947/536824‑537115

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.