New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	597840 =	55 (0.970)	4 (0.070)	4/246	NT	7.6%	coding (265/345 nt)	PP_0509	hypothetical protein
	?	NC_002947	597866 =	45 (0.830)					coding (291/345 nt)	PP_0509	hypothetical protein

CCGGTGTTCGCGGGTAAACCCGCTCCTACGGGTGACCGCGCAGGCGTTTCAATTTTCAAGCAAGACAGCGCTCACCCTACCCAGTGATAAACGGGCGCATCCACGCCACTCTCCACCTTGACCTCACTGCTGTGCCGCAAGCGCACCAGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/597991‑597840 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcagTGAGGTCAAGGTGGAGAGTGGCGTGGATGCGCCCGTTTATCACTGGGTAGGGTGAGCGCTGTCTTGCTTGAAAATTGAAACGCCTGCGCGGTCACCCGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACT  >  NC_002947/597866‑598011                                                                                                                                                                                                                                                                                                            CCGGTGTTCGCGGGTAAACCCGCTCCTACGGGTGACCGCGCAGGCGTTTCAATTTTCAAGCAAGACAGCGCTCACCCTACCCAGTGATAAACGGGCGCATCCACGCCACTCTCCACCTTGACCTCACTGCTGTGCCGCAAGCGCACC                                                                                                                                                         <  2:98439/147‑1   GGTGTTCGCGGGTAAACCCGCTCCTACGGGTGACCGCGCAGGCGTTTCAATTTTCAAGCAAGACAGCGCTCACCCTACCCAGTGATAAACGGGCGCATCCACGCCACTCTCCACCTTGACCTCACTGCTGTGCCGCAAGCGCACCAG                                                                                                                                                       >  6:75399/1‑147                                                                                                                            TCACTGCTGTGCCGCAAGCGCACCAGCAGTGAGGTCAAGGTGGAGAGTGGCGTGGATGCGCCCGTTTATCACTGGGTAGGGTGAGCGCTGTCTTGCTTGAAAATTGA                                                                      >  7:3758/1‑107                                                                                                                            TCACTGCTGTGCCGCAAGCGCACCAGCAGTGAGGTCAAGGTGGAGAGTGGCGTGGATGCGCCCGTTTATCACTGGGTAGGGTGAGCGCTGTCTTGCTTGAAAATTGA                                                                      <  8:3758/107‑1                                                                                                                                TGCTGTGCCGCAAGCGCACCAGCAGTGAGGTCAAGGTGGAGAGTGGCGTGGATGCGCCCGTTTATCACTGGGT                                                                                                    >  5:305610/1‑73                                                                                                                                TGCTGTGCCGCAAGCGCACCAGCAGTGAGGTCAAGGTGGAGAGTGGCGTGGATGCGCCCGTTTATCACTGGGT                                                                                                    <  6:305610/73‑1                                                                                                                                                   CAGCAGTGAGGTCAAGGTGGAGAGTGGCGTGGATGCGCCCGTTTATCACTGGGTAGGGTGAGCGCTGTCTTGCTTGAAAATTGAAACGCCTGCGCGGTCACCCGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCC     <  7:37006/149‑1                                                                                                                                                     GCAGTGAGGTCAAGGTGGAGAGTGGCGTGGATGCGCCCGTTTATCACTGGGTAGGGTGAGCGCTGTCTTGCTTGAAAATTGAAACGCCTGCGCGGTCACCCGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCAC   <  6:240325/149‑1                                                                                                                                                      CAGTGAGGTCAAGGTGGAGAGTGGCGTGGATGCGCCCGTTTATCACTGGGTAGGGTGAGCGCTGTCTTGCTTGAAAATTGAAACGCCTGCGCGGTCACCCGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACT  <  5:84669/149‑1                                                                                                                                                                                                                                                                                                            CCGGTGTTCGCGGGTAAACCCGCTCCTACGGGTGACCGCGCAGGCGTTTCAATTTTCAAGCAAGACAGCGCTCACCCTACCCAGTGATAAACGGGCGCATCCACGCCACTCTCCACCTTGACCTCACTGCTGTGCCGCAAGCGCACCAGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/597991‑597840 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcagTGAGGTCAAGGTGGAGAGTGGCGTGGATGCGCCCGTTTATCACTGGGTAGGGTGAGCGCTGTCTTGCTTGAAAATTGAAACGCCTGCGCGGTCACCCGTAGGAGCGGGTTTACCCGCGAACACCGGCAGAGCCGGTGCCATCCACT  >  NC_002947/597866‑598011

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.