New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	597840 =	55 (0.970)	4 (0.070)	4/246	NT	7.6%	coding (265/345 nt)	PP_0509	hypothetical protein
	?	NC_002947	597866 =	45 (0.830)					coding (291/345 nt)	PP_0509	hypothetical protein

GGCGACCGCTGCGGTGGCCGGGCCGCGCCAAAATGACGCTCAGTGGGCTGCGGCGCGTGATGTGTTGCGTCTGGCAGGACAGATGAGCGGGCCGGAATTGCTGGACCGCCTGGAAGGGCTGGCAGGGAGTACGGCGGCGGGCAAGCGGCTGCTGGTGCGCTTGCGGCACAGCAGTGAGGTCAAGGTGGAGAGTGGCGTGGATGCGCCCGTTTATCACTGGGTAGGGTGAGCGCTGTCTTGCTTGAAAATTGAAACGCCTGCGCGGTCACCCGTAGGAGCGGGTTTACCCGCG  >  NC_002947/597692‑597983                                                                                                                                                     |                                                                                                                                                ggcgACCGCTGCGGTGGCCGGGCCGCGCCAAAATGACGCTCAGTGGGCTGCGGCGCGTGATGTGTTGCGTCTGGCAGGACAGATGAGCGGGCCGGAATTGCTGGACCGCCTGGAAGGGCTGGCAGGGAGTACGGCGGCGGGCAAGCGgc                                                                                                                                                 <  7:97429/149‑1 (MQ=255)   agtggatggcaccggctctgccggtgttcgcgggtaaacccgctcctacgggtgaccgcgcaggcgtttcaattttcaagcaagacagcgctcaccctacccagtgataaacgggcgcatccacgccactctccaccttgacctcactg                                                                                                                                               <  5:84669‑M1/3‑1 (MQ=255)    gtggatggcaccggctctgccggtgttcgcgggtaaacccgctcctacgggtgaccgcgcaggcgtttcaattttcaagcaagacagcgctcaccctacccagtgataaacgggcgcatccacgccactctccaccttgacctcactgc                                                                                                                                              <  6:240325‑M1/4‑1 (MQ=255)      ggatggcaccggctctgccggtgttcgcgggtaaacccgctcctacgggtgaccgcgcaggcgtttcaattttcaagcaagacagcgctcaccctacccagtgataaacgggcgcatccacgccactctccaccttgacctcactgctg                                                                                                                                            <  7:37006‑M1/6‑1 (MQ=255)            cGGTGGCCGGGCCGCTCCAAAATGCCGCTCAGTGGGCTGCGGCGCGTGAGGTGTTGCGTCTGGCAGGACAGATGAGCGGGCCGGAATTGCTGGACCGCCTGGAAGGGCTGGCAGGGAGTACGGCGGCGGGCAAGCGGCTGCTGGTgc                                                                                                                                        <  8:166997/147‑1 (MQ=255)            cGGTGGCCGGGCCGCGCCAAAATGACGCTCAGTGGGCTGCGGCGCGTGATGTGTTGCGTCTGGCAGGACAGATGAGCGGGCCGGAATTGCTGGACCGCCTGGAAGGGCTGGCAGGGAGTACGGCGGCGGGCAAGCGGCTGCTGGTgc                                                                                                                                        <  4:351338/147‑1 (MQ=255)              gTGGCCGGGCCGCGCCAAAATGACGCTCAGTGGGCTGCGGCGCGTGATGTGTTGCGTCTGGCAGGACAGATGAGCGGGCCGGAATTGCTGGACCGCCTGGAAGGGCTGGCAGGGAGTACGGCGGCGGGCAAGCGGCTGCTGGTGCGCtt                                                                                                                                    >  5:109936/1‑149 (MQ=255)                 gccgggccgCGCCAAAATGACGCTCAGTGGGCTGCGGCGCGTGATGTGTTGCGTCTGGCAGGACAGATGAGCGGGCCGGAATTGCTGGACCGCCTGGAAGGGCTGGCAGGGAGTACGGCGGCGGGCAAGCGGCTGCTGGTGCGCTTGCg                                                                                                                                 <  7:338337/149‑1 (MQ=255)                      gccgCGCCTAAATGACGCTCAGTGGGCGGCGGCGCGTGATGTGTTGCGTCTGGCAGGACAGATGAGCTGGCCGGAATTGCTGGACCGCCTGGAAGGGCTGGCAGGGAGTACGGCGGCGGGCAAGCGGCTGCTGGTGCGCTTGCGGcaca                                                                                                                            <  8:231847/149‑1 (MQ=255)                      gccgCGCCAAAATGACGCTCAGTGGGCTGCGGCGCGTGATGTGTTGCGTCTGGCAGGACAGATGAGCGGGCCGGAATTGCTGGACCGCCTGGAAGGGCTGGCAGGGAGTACGGCGGCGGGCAAGCGGCTGCTGGTGCGCTTGCGGcaca                                                                                                                            <  8:61529/149‑1 (MQ=255)                      gccgCGCCAAAATGACGCTCAGTGGGCTGCGGCGCGTGATGTGTTGCGTCTGGCAGGACAGATGAGCGGGCCGGAATTGCTGGACCGCCTGGAAGGGCTGGCAGGGAGTACGGCGGCGGGCAAGCGGCTGCTGGTGCGCTTGCGGca                                                                                                                              >  5:147046/1‑147 (MQ=255)                         gcgcCAAAATGACGCTCAGTGGGCTGCGGCGCGTGATGTGTTGCGTCTGGCAGGACAGATGAGCGGGCCGGAATTGCTGGACCGCCTGGAAGGGCTGGCAGGGAGTACGGCGGCGGGCAAGCGGCTGCTGGTGCGCTTGCGGCAcagca                                                                                                                         <  1:182129/149‑1 (MQ=255)                             cAAAATGACGCTCAGTGGGCTGCGGCGCGTGATGTGTTGCGTCTGGCAGGACAGATGAGCGGGCCGGAATTGCTGGACCGCCTGGAAGGGCTGGCAGGGAGTACGGCGGCGGGCAAGCGGCTGCTGGTGCGCTTGCGGCACAGCAGt                                                                                                                       >  8:244957/1‑147 (MQ=255)                                aaTGACGCTCAGTGGGCTGCGGCGCGTGATGTGTTGCGTCTGGCAGGACAGATGAGCGGGCCGGAATTGCTGGACCGCCTGGAAGGGCTGGCAGGGAGTACGGCGGCGGGCAAGCGGCTGCTGGTGCGCTTGCGGCACAGCAGTGAgg                                                                                                                   >  7:45424/1‑148 (MQ=255)                                      gCTCAGTGGGCTGCGGCGCGTGATGTGTTGCGTCTGGCAGGACAGATGAGCGGGCCGGAATTGCTGGACCGCCTGGAAGGGCTGGCAGGGAGTACGGCGGCGGGCAAGCGGCTGCTGGTGCGCTTGCGGCACAGCAGTg                                                                                                                      <  7:130863/139‑1 (MQ=255)                                      gCTCAGTGGGCTGCGGCGCGTGATGTGTTGCGTCTGGCAGGACAGATGAGCGGGCCGGAATTGCTGGACCGCCTGGAAGGGCTGGCAGGGAGTACGGCGGCGGGCAAGCGGCTGCTGGTGCGCTTGCGGCACAGCAGTg                                                                                                                      >  8:130863/1‑139 (MQ=255)                                      gCTCAGTGGGCTGCGGCGCGTGATGTGTTGCGTCTGGCAGGACAGATGAGCGGGCCGGAATTGCTGGACCGCCTGGAAGGGCTGGCAGGGAGTACGGCGGCGGGCAAGCGGCTGCTGGTGCGCTTGCGGCACAGCAGTGAGGTCAAGGt                                                                                                            <  8:8699/149‑1 (MQ=255)                                          aGTGGGCTGCGGCGCGTGATGTGTTGCGTCTGGCAGGACAGATGAGCGGGCCGGAATTGCTGGACCGCCTGGAAGGGCTGGCAGGGAGTACGGCGGCGGGCAAGCGGCTGCTGGTGCGCTTGCGGCACAGCAGTGAGGTCAAGGTGgag                                                                                                        <  6:109936/149‑1 (MQ=255)                                                cTGCGGGGCGTTATGTGTTGCGTCTGTCAGGACAGATCAGCGGGCCGGAATTGCTGGACCGCCTGGAAGGGCTGGCAGGGAGTACGGCGGCGGTCAAGCGGCTGCTGGTGCGCTTGCGGCACAGCAGTGAGGTCAAGGTGGAGAGTGGc                                                                                                  <  6:214272/149‑1 (MQ=255)                                                       gcgTGATGTGTTGCGTCTGGCAGGACAGATGAGCGGGCCGGAATTGCTGGACCGCCTGGAAGGGCTGGCAGGGAGTACGGCGGCGGGCAAGCGGCTGCTGGTGCGCTTGCGGCACAGCAGTGAGGTCAAGGTGGAGAGTGGCGTGGATg                                                                                           <  6:167477/149‑1 (MQ=255)                                                            aTGTGTTGCGTCTGGCAGGACAGATGAGCGGGCCGGAATTGCTGGACCGCCTGGAAGGGCTGGCAGGGAGTACGGCGGCGGGCAAGCGGCTGCTGGTGCGCTTGCGGCACAGCAGTGAGGTCAAGGTGGAGAGTGGCGTGGATGCGccc                                                                                      <  3:178458/149‑1 (MQ=255)                                                             tgtgTTGCGTCTGGCAGGACAGATGAGCGGGCCGGAATTGCTGGACCGCCTGGAAGGGCTGGCAGGGAGTACGGCGGCGGGCAAGCGGCTGCTGGTGCGCTTGCGGCACAGCAGTGAGGTCAAGGTGGAGAGTGGCGTGGATGCGCCCg                                                                                     >  1:271523/1‑149 (MQ=255)                                                               tgtTGCGTCTGGCAGGACAGATGAGCGGGCCGGAATTGCTGGACCGCCTGGAAGGGCTGGCAGGGAGTACGGCGGCGGGCAAGCGGCTGCTGGTGCGCTTGCGGcac                                                                                                                             <  5:197279/107‑1 (MQ=255)                                                               tgtTGCGTCTGGCAGGACAGATGAGCGGGCCGGAATTGCTGGACCGCCTGGAAGGGCTGGCAGGGAGTACGGCGGCGGGCAAGCGGCTGCTGGTGCGCTTGCGGcac                                                                                                                             >  6:197279/1‑107 (MQ=255)                                                                   gCGTCTGGCAGGACAGATGAGCGGGCCGGAATTGCTGGACCGCCTGGAAGGGCTGGCAGGGAGTACGGCGGCGGGCACGCGGCTGCTGGTGCGCTTGCGGCACAGCAGTGAGGTCAAGGTGGAGAGTGGCGTGGATGCGCGCGTTTAt                                                                                >  6:54422/1‑148 (MQ=255)                                                                   gCGTCTGGCAGGACAGATGAGCGGGCCGGAATTGCTGGACCGCCTGGAAGGGCTGGCAGGGAGTACGGCGGCGGGCAAGCGGCTGCTGGTGCGCTTGCGGCACAGCAGTGAGGTCAAGGTGGAGAGTGGCGTGGATGCGCCCGTTTAt                                                                                <  5:82517/148‑1 (MQ=255)                                                                   gCGTCTGGCAGGACAGATGAGCGGGCCGGAATTGCTGGACCGCCTGGAAGGGCTGGCAGGGAGTACGGCGGCGGGCAAGCGGCTGCTGGTGCGCTTGCGGCACAGCAGTGAGGTCAAGGTGGAGAGTGGCGTGGATGCGCCCGTTTAt                                                                                >  7:194380/1‑148 (MQ=255)                                                                       tcaattttcaagcaagacagcgctcaccctacccagtgataaacgggcgcatccacgccactctccaccttgacctcaCTGCTGGTGCGCTTGCGGCACAGCAGTGa                                                                                                                     >  7:3758‑M1/79‑107 (MQ=255)                                                                       tcaattttcaagcaagacagcgctcaccctacccagtgataaacgggcgcatccacgccactctccaccttgacctcaCTGCTGGTGCGCTTGCGGCACAGCAGTGa                                                                                                                     <  8:3758‑M1/29‑1 (MQ=255)                                                                       cTGGCAGGACAGATGAGCGGGCCGGAATTGCTGGACCGCCTGGAAGGGCTGGCAGGGAGTACGGCGGCGGGCAAGCGGCTGCTGGTGCGCTTGCGGCACAGCAGTGAGGTCAAGGTgg                                                                                                          >  7:336795/1‑118 (MQ=255)                                                                       cTGGCAGGACAGATGAGCGGGCCGGAATTGCTGGACCGCCTGGAAGGGCTGGCAGGGAGTACGGCGGCGGGCAAGCGGCTGCTGGTGCGCTTGCGGCACAGCAGTGAGGTCAAGGTgg                                                                                                          <  8:336795/118‑1 (MQ=255)                                                                          gCAGGACAGATGAGCGGGCCGGAATTGCTGGACCGCCTGGAAGGGCTGGCAGGGAGTACGGCGGCGGGCAAGCGGCTGCTGGTGCACTTGCGGCACAGCAGTGAGGTCAAGGTGGAGAGTGGCGTGGATGCGCCCGTTTATCACTg                                                                           <  1:179362/146‑1 (MQ=255)                                                                          gCAGGACAGATGAGCGGGCCGGAATTGCTGGACCGCCAGGAAGGGCTGGCAGGGAGTACGGCGGCGGGCAAGCGGCTGCTGGTGCGCTTGCGGCACAGCAGTGAGGTCAAGGTGGAGAGTGGCGTGGATGCGCCCGTTTATCACTggg                                                                         >  1:246229/1‑148 (MQ=255)                                                                             ggACAGATGAGCGGGCCGGAATTGCTGGACCGCCTGGAAGGGCTGGCAGGGAGTACGGCGGCGGGCAAGCGGCTGCTGGTGCGCTTGCGGCACAGGAGTGAGGTCAAGGTGGAGAGTGGCGTGGATGCGCCCGTTTATCACTGGGTAgg                                                                     >  1:293836/1‑149 (MQ=255)                                                                                       gCGGGCCGGAATTGCTGGACCGCCTGGAAGGGCTGGCAGGGAGTTCGGCGGCGGGCAAGCGGCTGCTGGTGCGCTTGCGGCACAGCAGTGAGGTCAAGGTGGAGAGTGGCGTGGATGCGCCCGTTTATCACTGGGTAGGGTGAGCGCTg                                                           <  8:194380/149‑1 (MQ=255)                                                                                          ggCCGGACTTGCTGGCCCGCCGGGAAGGGCGGGCAGGGAGTACGGCGGCGGGCAAGCGGCTGCTGGTGCGCTTGCGGCACAGCAGTGAGGTCAAGGGGGAGAGTGGCGt                                                                                                <  8:120390/109‑1 (MQ=255)                                                                                          ggCCGGAATTGCTGGACCGCCTGGAAGGGCTGGCAGGGAGTACGGCGGCGGGCAAGCGGCTGCTGGTGCGCTTGCGGCCCAGCAGGGAGGTCAAGGTGGAGAGTGGCGt                                                                                                >  7:120390/1‑109 (MQ=255)                                                                                             cGGAATTGCTGGACCGCCTGGAAGGGCTGGCAGGGAGTACGGCGGCGGGCAAGCGGCTGCTGGTGCGCTTGCGGCACAGCAGTGAGGTCAAGGTGGAGAGTGGCGTGGATGCGCCCGttt                                                                                  <  2:155484/120‑1 (MQ=255)                                                                                             cGGAATTGCTGGACCGCCTGGAAGGGCTGGCAGGGAGTACGGCGGCGGGCAAGCGGCTGCTGGTGCGCTTGCGGCACAGCAGTGAGGTCAAGGTGGAGAGTGGCGTGGATGCGCCCGTTTATCACTGGGTAGGGTGAGCGCTGTcttgc                                                     >  3:36227/1‑149 (MQ=255)                                                                                              ggAATTGCTGGACCGCCTGGAAGGGCTGGCAGGGAGTACGGCGGCGGGCAAGCGGCTGCTGGTGCGCTTGCGGCACAGCAGTGAGGTCAAGGTGGAGAGTGGCGTGGATGCGCCCGTTTATCACTGGGTAGGGTGAGCGCTGTcttgct                                                    <  8:45424/149‑1 (MQ=255)                                                                                                    gCTGGACCGCCTGGAAGGGCTGGCAGGGAGTACGGCGGCGGGCAAGCGGCTGCTGGTGCGCTTGCGGCACAGCAGTGAGGTCAAGGTGGAGAGTGGCGTGGATGCGCCCGTTTATCACTGGGTAGGGTGAGCGCTGTCTTGCTTGaaaa                                              >  2:44073/1‑149 (MQ=255)                                                                                                     cTGGACCGCCTGGAAGGGCTGGCAGGGAGTACGGCGGCGGGCAAGCGGCTGCTGGTGCGCTTGCGGCACAGCAGTGAGGTCAAGGTGGAGAGTGGCGTGGATGCGCCCGTTTATCACTGGGTAGGGTGAGCGCTGTCTTGCTTGAAAAt                                             >  5:310314/1‑149 (MQ=255)                                                                                                     acccagtgataaacgggcgcatccacgccactctccaccttgacctcaCTGCTGGTGCGCTTGCGGCAcagca                                                                                                                         <  6:305610‑M1/25‑1 (MQ=255)                                                                                                     acccagtgataaacgggcgcatccacgccactctccaccttgacctcaCTGCTGGTGCGCTTGCGGCAcagca                                                                                                                         >  5:305610‑M1/49‑73 (MQ=255)                                                                                                      tGGACCGCCTGGAAGGGCTGGCAGGGAGTACGGCGGCGGGCAAGCGGCTGCTGGTGCGCTTGCGGCACAGCAGTGAGGTCAAGGTGGAGAGTGGCGTGGATGCGCCCGTTTATCACTGGGTAGGGTGAGCGCTGTCTTGCTTGAAAAtt                                            >  5:75399/1‑149 (MQ=255)                                                                                                       ggACCGCCTGGAAGGGCTGGCAGGGAGTACGGCGGCGGGCAAGCGGCTGCTGGTGCGCTTGCGGCACAGCAGTGAGGTCAAGGTGGAGAGTGGCGTGGATGCGCCCGTTTATCACTGGGTAGGGTGAGCGCTGTCTTGCTTGAAAAtt                                            >  8:37006/1‑148 (MQ=255)                                                                                                         aCCGCCTCGAAGGGCTGGCAGGGAGTACGGCGGCGGGCAAGCGGCTGCTGGTGCGCTTGCGGCACAGCAGTGAGGTCAAGGTGGAGAGTGGAGTGGATGCGCCCGTTTATCACTGGGTAGGGTGAGCGCTGTCTTGCTTGAAAATTGa                                          >  3:66891/1‑148 (MQ=255)                                                                                                             ccTGGAAGGGCTGGCAGGGAGTACGGCGGCGGGCAAGCGGCTGCTGGTGCGCTTGCGGCACAGCAGTGAGGTCAAGGTGGAGAGTGGCGTGGATGCGCCCGTTTATCACTGGGTAGGGTGAGCGCTGTCTTGCTTGAAAATTGAAACGc                                     >  7:29511/1‑149 (MQ=255)                                                                                                              cTGGAAGGGCTGGCAGGGAGTACGGCGGCGGGCAAGCGGCTGCTGGTGCGCTTGCGGCACAGCAGTGAGGTCAAGGTGGAGAGTGGCGTGGATGCGCCCGTTTATCACTGGGTAGGGTGAGCGCTGt                                                          >  3:324303/1‑127 (MQ=255)                                                                                                              cTGGAAGGGCTGGCAGGGAGTACGGCGGCGGGCAAGCGGCTGCTGGTGCGCTTGCGGCACAGCAGTGAGGTCAAGGTGGAGAGTGGCGTGGATGCGCCCGTTTATCACTGGGTAGGGTGAGCGCTGt                                                          <  4:324303/127‑1 (MQ=255)                                                                                                               tGGAAGGGCTGGCAGGGAGTACGGCGGCGGGCAAGCGGCTGCTGGTGCGCTTGCGGCACAGCAGTGAGGTCAAGGTGGAGAGTGGCGTGGATGCGCCCGTTTATCACTgg                                                                          >  6:180145/1‑110 (MQ=255)                                                                                                               tGGAAGGGCTGGCAGGGAGTACGGCGGCGGGCAAGCGGCTGCTGGTGCGCTTGCGGCACAGCAGTGAGGTCAAGGTGGAGAGTGGCGTGGATGCGCCCGTTTATCACTgg                                                                          <  5:180145/110‑1 (MQ=255)                                                                                                                ggAAGGGCTGGCAGGGAGTACGGCGGCGGGCAAGCGGCTGCTGGTGCGCTTGCGGCACAGCAGTGAGGTCAAGGTGGAGAGTGGCGTGGATGCGCCCGTTTATCACTGGGTAGGGTGAGCGCTGTCTTGCTTGAAAATTGAAACGCCTg                                  >  1:100081/1‑149 (MQ=255)                                                                                                                 gAAGGGCTGGCAGGGAGTACGGCGGCGGGCAAGCGGCTGCTGGTGCGCTTGCGGCACAGCAGTGAGGTCAAGGTGGAGAGTGGCGTGGATGCGCCCGTTTATCACTGGGTAGGGTGAGCGCTGTCTTGCTTGAAAATTGAAACGCCTgc                                 >  7:322636/1‑149 (MQ=255)                                                                                                                   aGGGCTGGCAGGGAGTACGGCGGCGGGCAAGCGGCTGCTGGTGCGCTTGCGGCACAGCAGTGAGGTCAAGGTGGAGAGTGGCGTGGATGCGCCCGTTTATCACTGGGTAGGGTGAGCGCTGTCTTGCTTGAAAAt                                             <  7:196665/135‑1 (MQ=255)                                                                                                                   aGGGCTGGCAGGGAGTACGGCGGCGGGCAAGCGGCTGCTGGTGCGCTTGCGGCACAGCAGTGAGGTCAAGGTGGAGAGTGGCGTGGATGCGCCCGTTTATCACTGGGTAGGGTGAGCGCTGTCTTGCTTGAAAAt                                             >  8:196665/1‑135 (MQ=255)                                                                                                                          gCAGGGAGTACGGCGGCGGGCAAGCGGCTGCTGGTGCGCTTGCGGCACAGCAGTGAGGTCAAGGTGGAGAGTGGCGTGGATGCGCCCGTTTATCACTGGGTAGGGTGAGCGCTGTCTTGCTTGAAAATTGAAACGCCTGCGCGGTCAc                         <  8:322636/148‑1 (MQ=255)                                                                                                                               gAGTACGGCGGCGGGCAAGCGGCTGCTGGTGCGCTTGCGGCACAGCAGTGAGGTCAAGGTGGAGAGTGGCGTGGATGCGCCCGTTTATCACTGGGTAGGGTGAGCGCTGTCTTGCTTGAAAATTGAAACGCCTGCGCGGTCACCCGTAg                   <  7:244957/149‑1 (MQ=255)                                                                                                                                     ggcggcggGCAAGCGGCTGCTGGTGCGCTTGCGGCACAGCAGTGAGGTCAAGGTGGAGAGTGGCGTGGATGCGCCCGTTTATCACTGGGTAGGGTGAGCGCTGTCTTGCTTGAAAATTGAAACGCCTGCGCGGTCACCCGTAGGAGCgg             <  8:29511/149‑1 (MQ=255)                                                                                                                                      gcggcggGCAAGCGGCTGCTGGTGCGCTTGCGGCACAGCAGTGAGGTCAAGGTGGAGAGTGGCGTGGATGCGCCCGTTTATCACTGGGTAGGGTGAGCGCTGTCTTGCTTGAAAATTGAAACGCCTGCGCGGTCACCCGTAGGAGCggg            <  4:36227/149‑1 (MQ=255)                                                                                                                                       cggcggGCAAGCGGCTGCTGGTGCGCTTGCGGCACAGCAGTGAGGTCAAGGTGGAGAGTGGCGTGGATGCGCCCGTTTATCACTGGGTAGGGTGAGCGCTGTCTTGCTTGAAAATTGAAACGCCTGCGCGGTCACCCGTAGGAGCGGGt           <  6:147046/149‑1 (MQ=255)                                                                                                                                              cAAGCGGCTGCTGGTGCGCTTGCGGCACAGCAGTGAGGTCAAGGTGGAGAGTGGCGTGGATGCGCCCGTTTATCACTGGGTAGGGTGAGCGCTGTCTTGCTTGAAAATTGAAACGCCTGCGCGGTCACCCGTAGGAGCGGGTTTACCcg    >  4:133785/1‑149 (MQ=255)                                                                                                                                               aaGCGGCTGCTGGTGCGCTTGCGGCACAGCAGTGAGGTCAAGGTGGAGAGTGGCGTGGATGCGCCCGTTTATCACTGGGTAGGGTGAGCGCTGTCTTGCTTGAAAATTGAAACGCCTGCGCGGTCACCCGTAGGAGCGGGTTTACCcgc   >  4:169634/1‑149 (MQ=255)                                                                                                                                                 gCGGCTGCTGGTGCGCTTGCGGCACAGCAGTGAGGTCAAGGTGGAGAGTGGCGTGGATGCGCCCGTTTATCACTGGGTAGGGTGAGCGCTGTCTTGCTTGAAAATTGAAACGCCTGCGCGGTCACCCGTAGGAGCGGGTTTACCcgcg  >  5:162076/1‑148 (MQ=255)                                                                                                                                                     |                                                                                                                                                GGCGACCGCTGCGGTGGCCGGGCCGCGCCAAAATGACGCTCAGTGGGCTGCGGCGCGTGATGTGTTGCGTCTGGCAGGACAGATGAGCGGGCCGGAATTGCTGGACCGCCTGGAAGGGCTGGCAGGGAGTACGGCGGCGGGCAAGCGGCTGCTGGTGCGCTTGCGGCACAGCAGTGAGGTCAAGGTGGAGAGTGGCGTGGATGCGCCCGTTTATCACTGGGTAGGGTGAGCGCTGTCTTGCTTGAAAATTGAAACGCCTGCGCGGTCACCCGTAGGAGCGGGTTTACCCGCG  >  NC_002947/597692‑597983

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.