| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 616014 | 45 (0.800) | 3 (0.060) | 3/248 | NT | 7.0% | coding (288/651 nt) | ribB | 3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase |
| ? | NC_002947 | = 616042 | 37 (0.680) | coding (260/651 nt) | ribB | 3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase | |||||
AAAACATGCCCCGGGCTGACGATATGGCGCTGTTCGGCGCTGGAACGCAGTGCTGCGTCAATGGTGGTGATGCGGTCCTGGGCGCTAACCCCGGTGGTGATACCTTCGGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/615901‑616014‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgccACGGCACCGGTTTCACCGTCACCATCGAGGCGGCCGAAGGTATCACCACCGGGGTTAGCGCCCAGGACCGCATCACCACCATTGACGCAGCACTGCGTTCCAGCGCCGAACAGCGCCATATCGTCAGCCCGGGGCATGTTTTTC < NC_002947/616042‑615899 AAAACATGCCCCGGGCTGACGATATGGCGCTGTTCGGCGCTGGAACGCAGTGCTGCGTCAATGGTGGTGATGCGGTCCTGGGCGCTAACCCCGGTGGTGATACCTTCGGCCGCCACGGCACCGGTTTCACCGTCACCATCGAGGCGGCC < 5:183371/149‑1 ACGATATGGCGCTGTTCGGCGCTGGAACGCAGTGCTGCGTCAATGGTGGTGATGCGGTCCTGGGCGCTAACCCCGGTGGTGATACCTTCGGCCGCCACGGCACCGGTTTCACCGTCACCATCGAGGCGG < 7:223476/129‑1 ACGATATGGCGCTGTTCGGCGCTGGAACGCAGTGCTGCGTCAATGGTGGTGATGCGGTCCTGGGCGCTAACCCCGGTGGTGATACCTTCGGCCGCCACGGCACCGGTTTCACCGTCACCATCGAGGCGG > 8:223476/1‑129 ccggcaCGCCACCGCACAGGTTTCACCGGCACCATCGAGGCGGCCGAAGGTATCACCACCGGGGTTAGCGACCAGCACCGCAGCACGACCATTGACGCAGCACTGCGTTCCAGCGCCGAACAGCGCCATATCGTCAGCCCGGGGCATGT > 8:122954/7‑149 CCGCCACGGCACCGGTTTCACCGTCACCATCGAGGCGGCCGAAGGTATCACCACCGGGGTTAGCGCCCAGGACCGCATCACCACCATTGACGCAGCACTGCGTTCCAGCGCCGAACAGCGCCATATCGTCAGCCCGGGGCATGTTTTTC > 5:41652/1‑149 CGCCACGGCACCGGTTTCACCGTCACCATCGAGGCGGCCGAAGGTATCACCACCGGGGTTAGCGCCCAGGACCGCATCACCACCATTGACGCAGCACTGCGTTCCAGCGCCGAACAGCGCCATATCGTCAGC > 3:37989/1‑132 CGCCACGGCACCGGTTTCACCGTCACCATCGAGGCGGCCGAAGGTATCACCACCGGGGTTAGCGCCCAGGACCGCATCACCACCATTGACGCAGCACTGCGTTCCAGCGCCGAACAGCGCCATATCGTCAGC < 4:37989/132‑1 AAAACATGCCCCGGGCTGACGATATGGCGCTGTTCGGCGCTGGAACGCAGTGCTGCGTCAATGGTGGTGATGCGGTCCTGGGCGCTAACCCCGGTGGTGATACCTTCGGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/615901‑616014‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgccACGGCACCGGTTTCACCGTCACCATCGAGGCGGCCGAAGGTATCACCACCGGGGTTAGCGCCCAGGACCGCATCACCACCATTGACGCAGCACTGCGTTCCAGCGCCGAACAGCGCCATATCGTCAGCCCGGGGCATGTTTTTC < NC_002947/616042‑615899 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |