New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	707277 =	51 (0.900)	3 (0.060)	3/244	NT	6.2%	coding (72/279 nt)	rpsT	30S ribosomal protein S20
	?	NC_002947	707313 =	43 (0.800)					coding (36/279 nt)	rpsT	30S ribosomal protein S20

CTTGACATCCGCTCGACTGATCGGCATGATTCGCGGCCTATTTTGTTTGCTATTTACCTAAAGTCTTTCGAGGAGCTCGACGGTGGCCAACACACCTTCCGCCAAGAAACGTGCAAAACAGGCTGAGAAGCGTCGCAGCCACAACGCCAGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/707430‑707277 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcctgTTTTGCACGTTTCTTGGCGGAAGGTGTGTTGGCCACCGTCGAGCTCCTCGAAAGACTTTAGGTAAATAGCAAACAAAATAGGCCGCGAATCATGCCGATCAGTCGAGCGGATGTCAAGGCCACCTGCAAGGTTCCGCCGAGCGGTG  >  NC_002947/707313‑707458                                                                                                                                                                                                                                                                                                              CTTGACATCCGCTCGACTGATCGGCATGATTCGCGGCCTATTTTGTTTGCTATTTACCTAAAGTCTTTCGAGGAGCTCGACGGTGGCCAACACACTTTCCGCCAAGAAACGTGCAAAACAGGCTGAGAAGCGTCGCAGCCACAACGCCA                                                                                                                                                         <  5:161130/149‑1    GACATCCGCTCGACTGATCGGCATGATTCGCGGCCTATTTTGTTTGCTATTTACCTAAAGTCTTTCGAGGAGCTCGACGGTGGCCAACACACCTTCCGCCAAGAAACGTGCAAAACAGGCTGAGAAGCGTCGCAGCCACAACGCCAGC                                                                                                                                                       <  5:316416/148‑1                                                                                                                TGCAAAACAGGCTGAGAAGCGTCGCAGCCACAACGCCAGCCTGTTTTGCACGTTTCTTGGCGGAAGGTGTGTTGGCCACCGTCGAGCTCCTCGAAAGACTTTAGGTAAATAGCAAACAAAATA                                                                    >  1:121724/1‑123                                                                                                                TGCAAAACAGGCTGAGAAGCGTCGCAGCCACAACGCCAGCCTGTTTTGCACGTTTCTTGGCGGAAGGTGTGTTGGCCACCGTCGAGCTCCTCGAAAGACTTTAGGTAAATAGCAAACAAAATA                                                                    <  2:121724/123‑1                                                                                                                 GCAAAATAGGCTGAGAAGCGTCGCAGCCACAACGCCAGCCTGTTTTGCACGTTTCTTGGCGGAAGGTGTGTTGGCCACCGTCGAGCTCCTCGAAAGACTTTAGGTAAATAGCAAACAAAATAGGCCGCGAATCATGCCGATCAGTCGAG                                         >  2:64807/1‑149                                                                                                                                                       CCTGTTTTGCACGTTTCTTGGCGGAAGGTGTGTTGGCCACCGTCGAGCTCCTCGAAAGACTTTAGGTAAATAGCAAACAAAATAGGCCGCGAATCATGCCGAT                                                 >  7:18084/1‑103                                                                                                                                                       CCTGTTTTGCACGTTTCTTGGCGGAAGGTGTGTTGGCCACCGTCGAGCTCCTCGAAAGACTTTAGGTAAATAGCAAACAAAATAGGCCGCGAATCATGCCGAT                                                 <  8:18084/103‑1                                                                                                                                                        CTGTTTTGCACGTTTCTTGGCGGAAGGTGTGTTGGCCACCGTCGAGCTCCTCGAAAGACTTTAGGTAAATAGCAAACAAAATAGGCCGCGAATCATGCCGATCAGTCGAGCGGATGTCAAGGCCACCTGCAAGGTTCCGCCGAGCGGTG  >  2:62202/1‑149                                                                                                                                                                                                                                                                                                              CTTGACATCCGCTCGACTGATCGGCATGATTCGCGGCCTATTTTGTTTGCTATTTACCTAAAGTCTTTCGAGGAGCTCGACGGTGGCCAACACACCTTCCGCCAAGAAACGTGCAAAACAGGCTGAGAAGCGTCGCAGCCACAACGCCAGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/707430‑707277 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcctgTTTTGCACGTTTCTTGGCGGAAGGTGTGTTGGCCACCGTCGAGCTCCTCGAAAGACTTTAGGTAAATAGCAAACAAAATAGGCCGCGAATCATGCCGATCAGTCGAGCGGATGTCAAGGCCACCTGCAAGGTTCCGCCGAGCGGTG  >  NC_002947/707313‑707458

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.