| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 809179 = | 43 (0.760) | 4 (0.070) | 4/246 | NT | 9.0% | coding (179/1335 nt) | PP_0695 | hypothetical protein |
| ? | NC_002947 | 809261 = | 40 (0.740) | coding (97/1335 nt) | PP_0695 | hypothetical protein | |||||
CCTGATCGAGCCGCTGTGCGAGCGTTTCGACCAGGGCACCCTGAGCCTGGTCGAACTGCGCCAGCATGTGGCCCGCCAGCAGCTCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/809265‑809179‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctcgaTCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACTCGTTGCCAAGAAAAAGGGGGCGATTGTACTGCATTCGCGGGGGTGGTTTTTACCCCTTGGTCTGTAATGAGAAATAACCATGGGA > NC_002947/809261‑809408 CCTGATCGAGCCGCTGTGCGAGCGTTTCGACCAGGGCACCCTGAGCCTGGTCGAACTGCGCCAGCATGTGGCCCGCCAGCAGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGAC > 8:280582/1‑149 GAGCCGCTGTGCGAGCGTTTCGACCAGGGCACCCTGAGCCTGGTCGAACTGCGCCAGCATGTGGCCCGCCAGCAGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACTCGTTGC > 3:147609/1‑149 GACCAGGGCACCCTGAGCCTGGTCGAACTGCGCCAGCATGTGGCCCGCCAGCAGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACTCGTTGCCAAGAAAAAGGGGGCGATTG > 1:266255/1‑148 GCCCGCCAGCAGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACTCGTTGCCAAGAAAAAGGGGGCGATTGTACTGCATTCGCGGGGGTGGTTTTTACCCCTTGGTCTGTAATG < 7:280582/149‑1 ccccGCAGCTCGATCCGGGCCCAGTGTTCGGCTCCCGCCCGCCGGCCGCGCTGGGGTGCGATCATTGGCTTCGACTCGTTGCCAAGAAAACGGGGGCGATTGTCCTGCATTCGCGGGGGTGGTTTTTACCCCTTGGTCTGTAATGAGAA < 2:266255/145‑1 CTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACTCGTTGCCAAGAAAAAGGGGGCGATTGTACTGCATTCGCGGGGGTGGTTTTTACCCCTTGGTCTGTAATGAGAAATAACCAT < 8:338294/149‑1 CGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACTCGTTGCCAAGAAAAAGGGGGCGATTGTACTGCATTCGCGGGGGTGGTTTTTACCCCTTGGTCTGTAATGAGAAATAACCATGG < 3:179467/149‑1 ATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACTCGTTGCCAAGAAAAAGGGGGCGATTGTACTGCATTCGCGGGGGTGGTTTTTACCCCTTGGTCTGTAATGAGAAATAACCATGGGA > 8:37143/1‑149 ATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACTCGTTGCCAAGAAAAAGGGGGCGATTGTACTGCATTCGCGGGGGTGGTTTTTACCCCTTG > 5:195727/1‑123 CCTGATCGAGCCGCTGTGCGAGCGTTTCGACCAGGGCACCCTGAGCCTGGTCGAACTGCGCCAGCATGTGGCCCGCCAGCAGCTCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/809265‑809179‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctcgaTCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGGTTCGATCATTGGCTTCGACTCGTTGCCAAGAAAAAGGGGGCGATTGTACTGCATTCGCGGGGGTGGTTTTTACCCCTTGGTCTGTAATGAGAAATAACCATGGGA > NC_002947/809261‑809408 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |