| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 809179 = | 43 (0.760) | 4 (0.070) | 4/246 | NT | 9.0% | coding (179/1335 nt) | PP_0695 | hypothetical protein |
| ? | NC_002947 | 809261 = | 40 (0.740) | coding (97/1335 nt) | PP_0695 | hypothetical protein | |||||
GCCCAGCCGGTGTTCGCGGCGCAGGTAGGCGAGGAAGTCGTGGATCTGCGCGTTGAGCTCGAAACGGTTCGGGCTCTTGGCCACCGGGACCAGGATATCCAGGCGGATCCACACGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGG > NC_002947/809031‑809303 | tcccatggttatttctcattacagaccaaggggtaaaaaccacccccgcgaatgcagtacaatcgccccctttttcttggcaacgagtcgaagccaatgatcgaacccaagcgcgtcctgcgcgccctagccgaacactgggccctgat > 8:37143‑M1/149‑149 (MQ=255)gCCCAGCCGGTGTTCGCGGCGCAGGTAGGCGAGGAAGTCGTGGATCTGCGCGTTGAGCTCGAAACGGTTCGGGCTCTTGGCCACCGGGACCAGGATATCCAGGCGGATCCACACGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCttt < 5:363567/149‑1 (MQ=255)gCCCAGCCGGTGTTCGCGGCGCAGGTAGGCGAGGAAGTCGTGGATCTGCGCGTTGAGCTCGAAACGGTTCGGGCTCTTGGCCACCGGGACCAGGATATCCAGGCGGATCCACACGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCttt > 6:218167/1‑149 (MQ=255) cccAGCCGGTGTTCGCGGCGCAGGTAGGCGAGGAAGTCGTGGATCTGCGCGTTGAGCTCGAAACGGTTCGGGCTCTTGGCCACCGGGACCAGGATATCCAGGCGGATCCACACGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTc < 2:298872/149‑1 (MQ=255) ccatggttatttctcattacagaccaaggggtaaaaaccacccccgcgaatgcagtacaatcgccccctttttcttggcaacgagtcgaagccaatgatcgaacccaagcgcgtcctgcgcgccctagccgaacactgggccctgaTCg < 3:179467‑M1/3‑1 (MQ=255) ccAGCCGGTGTTCGCGGCGCAGGTAGGCGAGGAAGTCGTGGATCTGCGCGTTGAGCTCGAAACGGTTCGGGCTCTTGGCCACCGGGACCAGGATATCCAGGCGGATCCACACGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTc > 4:136589/1‑148 (MQ=255) ccAGCCGGTGTTCGCGGCGCAGGTAGGCGAGGAAGTCGTGGATCTGCGCGTTGAGCTCGAAACGGTTCGGGCTCTTGGCCACCGGGACCAGGATATCCAGGCGGATCCACACGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCg < 5:218167/149‑1 (MQ=255) ccAGCCGGTGTTCGCGGCGCAGGTAGGCGAGGAAGTCGTGGATCTGCGCGTTGAGCTAGAAACGGTTCGGGCTCTTGGCCACCGGGACCAGGATATCCAGGCGGATCCACACGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCg > 4:354054/1‑149 (MQ=255) atggttatttctcattacagaccaaggggtaaaaaccacccccgcgaatgcagtacaatcgccccctttttcttggcaacgagtcgaagccaatgatcgaacccaagcgcgtcctgcgcgccctagccgaacactgggccctgaTCGAg < 8:338294‑M1/5‑1 (MQ=255) aGCCGGTGTTCGCGGCGCAGGTAGGCGAGGAAGTCGTGGATCTGCGCGTTGAGCTCGAAACGGTTCGGGCTCTTGGCCACCGGGACCAGGATATCCAGGCGGATCCACACGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAg < 7:8468/149‑1 (MQ=255) ttctcattacagaccaaggggtaaaaaccacccccgcgaatgcaggacaatcgcccccgttttcttggcaacgagtcgaagccaatgatcgcaccccagcgcggccggcgggcgggagccgaacactgggcccggatcgagctgcgggg < 2:266255‑M1/13‑5 (MQ=255) ttCGCGGCGCAGGTAGGCGAGGAAGTCGTGGATCTGCGCGTTGAGCTCGAAACGGTTCGGGCTCTTGGCCACCGGGACCAGGATATCCAGGCGGATCCACACGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTgg < 3:79628/148‑1 (MQ=255) gcggcgCAGGTAGGCGAGGAAGTCGTGGATCTGCGCGTTGAGCTCGAAACGGTTCGGGCTCTTGGCCACCGGGACCAGGATATCCAGGCGGATCCACACGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCggg > 6:125444/1‑149 (MQ=255) cattacagaccaaggggtaaaaaccacccccgcgaatgcagtacaatcgccccctttttcttggcaacgagtcgaagccaatgatcgaacccaagcgcgtcctgcgcgccctagccgaacactgggccctgaTCGAGCTGCTGGCGGGc < 7:280582‑M1/17‑1 (MQ=255) ggcgCAGGTAGGCGAGGAAGTCGTGGATCTGCGCGTTGAGCTCGAAACGGTTCGGGCTCTTGGCCACCGGGACCAGGATATCCAGGCGGATCCACACGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGc > 5:73768/1‑148 (MQ=255) cAGGTAGGCGAGGAAGTCGTGGATCTGCGCGTTGAGCTCGAAACGGTTCGGGCTCTTGGCCACCGGGACCAGGATATCCAGGCGGATCCACACGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACAt < 6:73768/149‑1 (MQ=255) tAGGCGAGGAAGTCGTGGATCTGCGCGTTGAGCTCGAAACGGTTCGGGCTCTTGGCCACCGGGACCAGGATATCCAGGCGGATCCACACGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTg < 1:19965/149‑1 (MQ=255) caaggggtaaaaaccacccccgcgaatgcagtacaatcgccccctttttcttggcaacgagtcgaagccaatgatcgaacccaagcgcgtcctgcgcgccctagccgaacactgggccctgat > 5:195727‑M1/123‑123 (MQ=255) gAGGAAGTCGTGGATCTGCGCGTTGAGCTCGAAACGGTTCGGGCTCTTGGCCACCGGGACCAGGATATCCAGGCGGATCCACACGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTGgcg > 7:319353/1‑147 (MQ=255) gTGGATCTGCGCGTTGAGCTCGAAACGGTTCGGGCTCTTGGCCACCGGGACCAGGATATCCAGGCGGATCCACACGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGa > 3:274309/1‑113 (MQ=255) gTGGATCTGCGCGTTGAGCTCGAAACGGTTCGGGCTCTTGGCCACCGGGACCAGGATATCCAGGCGGATCCACACGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACAt > 2:12934/1‑131 (MQ=255) gTGGATCTGCGCGTTGAGCTCGAAACGGTTCGGGCTCTTGGCCACCGGGACCAGGATATCCAGGCGGATCCACACGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACAt < 1:12934/131‑1 (MQ=255) gATCTGCGCGTTGAGCTCGAAACGGTTCGGGCTCTTGGCCACCGGGACCAGGATATCCAGGCGGATCCACACGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGc > 2:50789/1‑149 (MQ=255) tGCGCGTTGAGCTCGAAACGGTTCGGGCTCTTGGCCACCGGGACCAGGATATCCAGGCGGATCCACACGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGt > 7:263868/1‑135 (MQ=255) tGCGCGTTGAGCTCGAAACGGTTCGGGCTCTTGGCCACCGGGACCAGGATATCCAGGCGGATCCACACGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGt < 8:263868/135‑1 (MQ=255) cgcgTTGAGCTCGAAACGGTTCGGGCTCTTGGCCACCGGGACCAGGATATCCAGGCGGATCCACACGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAgg < 2:288506/148‑1 (MQ=255) tGAGCTCGAAACGGTTCGGGCTCTTGGCCACCGGGACCAGGATATCCAGGCGGATCCACACGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGccc > 5:338031/1‑149 (MQ=255) gCTCGAAACGGTTCGGGCTCTTGGCCACCGGGACCAGGATATCCAGGCGGATCCACACGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGACACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTgg < 3:136589/149‑1 (MQ=255) cTCGAAACGGTTCGGGCTCTTGGCCACCGGGACCAGGATATCCAGGCGGATCCACACGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGt < 4:224131/149‑1 (MQ=255) caatcgccccctttttcttggcaacgagtcgaagccaatgatcgaacccaagcgcgtcctgcgcgccctagccgaacactgggccctgaTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTc > 1:266255‑M1/90‑148 (MQ=255) tctTGGCCACCGGGACCAGGATATCCAGGCGGATCCACACGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGc > 5:96270/1‑149 (MQ=255) tctTGGCCACCGGGACCAGGATATCCAGGCGGATCCACACGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGc > 5:42244/1‑149 (MQ=255) gcaacgagtcgaagccaatgatcgaacccaagcgcgtcctgcgcgccctagccgaacactgggccctgaTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTc > 3:147609‑M1/70‑149 (MQ=255) ccACCGGGACCAGGATATCCAGGCGGATCCACACGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCt < 8:58444/147‑1 (MQ=255) ccACCGGGACCAGGATATCCAGGCGGATCCACACGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCt > 7:58444/1‑147 (MQ=255) cGGGACCAGGATATCCAGGCGGATCCACACGTCGAGTAGCTGGGTGGTGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGAt > 6:67320/1‑147 (MQ=255) gggACCAGGATATCCAGGCGGATCCACACGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAg > 7:92436/1‑149 (MQ=255) gtcgaagccaatgatcgaacccaagcgcgtcctgcgcgccctagccgaacactgggccctgaTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAgg > 8:280582‑M1/63‑149 (MQ=255) gACCAGGATATCCAGGCGGATCCACACGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAggg < 1:50789/149‑1 (MQ=255) gACCAGGATATCCAGGCGGATCCACACGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAggg < 6:338031/149‑1 (MQ=255) gATATCCAGGCGGATCCACACGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAg < 6:363049/87‑1 (MQ=255) gATATCCAGGCGGATCCACACGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTCGCGCAg > 5:363049/1‑87 (MQ=255) tCCAGGCGGATCCACACGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTc < 3:354054/149‑1 (MQ=255) cGGATCCACACGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAg > 7:38707/1‑149 (MQ=255) ggATCCACACGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAgg < 6:42244/149‑1 (MQ=255) acacGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAgg > 1:281911/1‑125 (MQ=255) acacGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAgg < 2:281911/125‑1 (MQ=255) acacGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGgcgcg > 6:151646/1‑148 (MQ=255) acacGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGgcgcg > 7:62351/1‑148 (MQ=255) acacGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGgcgcg > 3:75563/1‑148 (MQ=255) cGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAgg < 8:62351/149‑1 (MQ=255) gTCGAGTAGCTGGGTGGTGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGa < 5:67320/149‑1 (MQ=255) gTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGa < 4:75563/149‑1 (MQ=255) gTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGa < 8:92436/149‑1 (MQ=255) gAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGcc > 8:131112/1‑121 (MQ=255) gAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGcc < 7:131112/121‑1 (MQ=255) cTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAg > 8:176789/1‑72 (MQ=255) cTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAg < 7:176789/72‑1 (MQ=255) cTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTgg < 8:38707/149‑1 (MQ=255) tGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTggg < 6:96270/149‑1 (MQ=255) | GCCCAGCCGGTGTTCGCGGCGCAGGTAGGCGAGGAAGTCGTGGATCTGCGCGTTGAGCTCGAAACGGTTCGGGCTCTTGGCCACCGGGACCAGGATATCCAGGCGGATCCACACGTCGAGTAGCTGGGTGATGTCCTGCGGGGTGCTTTCGAGCTGCTGGCGGGCCACATGCTGGCGCAGTTCGACCAGGCTCAGGGTGCCCTGGTCGAAACGCTCGCACAGCGGCTCGATCAGGGCCCAGTGTTCGGCTAGGGCGCGCAGGACGCGCTTGGG > NC_002947/809031‑809303 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |