New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1007919 = | 41 (0.730) | 3 (0.060) | 3/248 | NT | 6.2% | coding (829/1158 nt) | yehX | ABC transporter ATP‑binding protein |
? | NC_002947 | 1007980 = | 51 (0.940) | coding (768/1158 nt) | yehX | ABC transporter ATP‑binding protein |
AGGATGCAGCGGACAACGCGCCGTCGGTGAGCCCGGAAACACCGGTGGGCGACGCGCTGGAGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1007984‑1007919 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgcATCCTCGGCACGCACCAGCAACAGGCGTTTGAGGGTGCTGTCCTGGCCCACAAAGTTGCTGACGAAATCATCCGCCGGGTGCGC > NC_002947/1007980‑1008063 AGGATGCAGCGGACAACGCGCCGTCGGTGAGCCCGGAAACACCGGTGGGCGACGCGCTGGAGCTGCATCCTCGGCACGCACCAGCAACAGGCGTTTGAGGGTGCTGTCCTGGCCCACAAAGTTGCTGACGA > 5:98050/1‑131 AGGATGCAGCGGACAACGCGCCGTCGGTGAGCCCGGAAACACCGGTGGGCGACGCGCTGGAGCTGCATCCTCGGCACGCACCAGCAACAGGCGTTTGAGGGTGCTGTCCTGGCCCACAAAGTTGCTGACGA < 6:98050/131‑1 GATGCAGCGGACAACGCGCCGTCGGTGAGCCCGGAAACACCGGTGGGCGACGCGCTGGAGCTGCATCCTCGGCACGCACCAGCAACAGGCGTTTGAGGGTGCTGTCCTGGCCCACAAAGTTGCTGACGAAATCATCCGCCGGGTGCGC > 4:226697/1‑148 AGGATGCAGCGGACAACGCGCCGTCGGTGAGCCCGGAAACACCGGTGGGCGACGCGCTGGAGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1007984‑1007919 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgcATCCTCGGCACGCACCAGCAACAGGCGTTTGAGGGTGCTGTCCTGGCCCACAAAGTTGCTGACGAAATCATCCGCCGGGTGCGC > NC_002947/1007980‑1008063 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |