New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1007919 =41 (0.730)3 (0.060) 3/248 NT 6.2% coding (829/1158 nt) yehX ABC transporter ATP‑binding protein
?NC_002947 1007980 = 51 (0.940)coding (768/1158 nt) yehX ABC transporter ATP‑binding protein

TGCTCATCGTGCGACGCGGTGGCATTGAACGGCCGCAGGAAATCGCCACACGTCCCTTGCTGGCGGTGCATGTCGCGCCGGCGCACATAGCCCAGCGCCTTGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCTCGGCACGCACCAGCAACAGGCGTTTGAGGGTGCTGTCCTGGCCCACAAAGTTGCTGACGAAATCATCCGCCGGGTGCG  >  NC_002947/1007771‑1008062
                                                                                                                                                    |                                                                                                                                               
tGCTCATCGTGCGACGCGGTGGCATTGAACGGCCGCAGGAAATCGCCACACGTCCCTTGCTGGCGGTGCATGTCGCGCCGGCGCACATAGCCCAGCGCCTTGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGag                                                                                                                                                 <  8:292328/149‑1 (MQ=255)
                 ggTGGCATTGAACGGCCGCAGGAAATCGCCACACGTCCCTTGCTGGCGGTGCATGTCGCGCCGGCGCACATAGCCCAGCGCCTTGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGc                                                                                                                                <  6:247173/149‑1 (MQ=255)
                  gTGGCATTGAACGGCCGCAGGAAATCGCCACACGTCCCTTGCTGGCGGTGCATGTCGCGCCGGCGCACATAGCCCAGCGCCTTGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGcc                                                                                                                               <  5:296405/149‑1 (MQ=255)
                  gTGGCATTGAACGGCCGCAGGAAATCGCCACACGTCCCTTGCTGGCGGTGCATGTCGCGCCGGCGCACATAGCCCAGCGCCTTGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGcc                                                                                                                               <  3:172007/149‑1 (MQ=255)
                        ttGAACGGCCGCAGGAAATCGCCACACGTCCCTTGCTGGCGGTGCATGTCGCGCCGGCGCACATAGCCCAGCGCCTTGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCgg                                                                                                                         >  7:104600/1‑149 (MQ=255)
                          gAACGGCCGCAGGAAATCGCCACACGTCCCTTGCTGGCGGTGCATGTCGCGCCGGCGCACATAGCCCAGCGCCTTGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGgt                                                                                                                        <  6:114626/148‑1 (MQ=255)
                          gAACGGCCGCAGGAAATCGCCACACGTCCCTTGCTGGCGGTGCATGTCGCGCCGGCGCACATAGCCCAGCGCCTTGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGgt                                                                                                                        <  6:136341/148‑1 (MQ=255)
                            aCGGCCGCAGGAAATCGCCACACGTCCCTTGCTGGCGGTGCATGTCGCGCCGGCGCACATAGCCCAGCGCCTTGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGtt                                                                                                                     >  3:94091/1‑149 (MQ=255)
                                  gCAGGAAATCGCCACACGTCCCTTGCTGGCGGTGCATGTCGCGCCGGCGCACATAGCCCAGCGCCTTGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCggg                                                                                                               >  5:328467/1‑149 (MQ=255)
                                  gCAGGAAATCGCCACACGTCCCTTGCTGGCGGTGCATGGCGCGCCGGCGCACATAGCCCAGCGCCTTGTGCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCggg                                                                                                               <  5:118437/149‑1 (MQ=255)
                                                    tCCCTTGCTGGCGGTGCATGTCGCGCCGGCGCACATAGCCCAGCGCCTTGTTCTGCGCATCGGTCACCACCGCGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTg                                                                                             >  2:45636/1‑149 (MQ=255)
                                                     cccTTGCTGGCGGTGCATGTCGCGCCGGCGCACATAGCCCAGCGCCTTGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGt                                                                                            >  4:320170/1‑149 (MQ=255)
                                                       cTTGCTGGCGGTGCATGTCGCGCCGGCGCACATAGCCCAGCGCCTTGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCggg                                                                                                               <  7:332854/128‑1 (MQ=255)
                                                       cTTGCTGGCGGTGCATGTCGCGCCGGCGCACATAGCCCAGCGCCTTGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCggg                                                                                                               >  8:332854/1‑128 (MQ=255)
                                                           cTGGCGGTGCATGTCGCGCCGGCGCACATAGCCCAGCGCCTTGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTg                                                                                      <  8:91169/149‑1 (MQ=255)
                                                                gcgcacccggcggatgatttcgtcagcaactttgtgggccaggacagcaccctcaaacgcctgttgctggtgcgtgccgaggatGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATc                                                                                  >  4:226697‑M1/85‑148 (MQ=255)
                                                                     aTGTCGCGCCGGCGCACATAGCCCAGCGCCTTGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCt                                                                                       >  1:97024/1‑138 (MQ=255)
                                                                     aTGTCGCGCCGGCGCACATAGCCCAGCGCCTTGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCt                                                                                       <  2:97024/138‑1 (MQ=255)
                                                                          gcgcCGGCGCACATAGCCCAGCGCCTTGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGtt                                                                                              <  8:289112/126‑1 (MQ=255)
                                                                           cgcCGGCGCACATAGCCCAGCGCCTTGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCTCGgcacgcac                                                                      <  8:108735/149‑1 (MQ=255)
                                                                            gcCGGCGCACATAGCCCAGCGCCTTGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCTCGgcacgcac                                                                      >  1:94784/1‑148 (MQ=255)
                                                                                   tcgtcagcaactttgtgggccaggacagcaccctcaaacgcctgttgctggtgcgtgccgaggatGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCt                                                                                <  6:98050‑M1/66‑1 (MQ=255)
                                                                                   tcgtcagcaactttgtgggccaggacagcaccctcaaacgcctgttgctggtgcgtgccgaggatGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCt                                                                                >  5:98050‑M1/66‑131 (MQ=255)
                                                                                      aTAGCCCAGCGCCTTGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCTCGGCACGCACCAGCAACAGGc                                                           >  4:22937/1‑149 (MQ=255)
                                                                                      aTAGCCCAGCGCCTTGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTACGCTGCATCCTCGGCACGCACCAGCAACAGGc                                                           <  4:94091/149‑1 (MQ=255)
                                                                                            cAGCGCCTTGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCTCGGCACGCACCAGCAACAGGCGttt                                                       >  1:27200/1‑147 (MQ=255)
                                                                                              gcgcCTTGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCTCGGCACGCACCAGCAACAGGCGTTTGAgg                                                   <  3:320170/149‑1 (MQ=255)
                                                                                                   ttGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCTCGGCACGCACCAGCAACAGGCGTTTGAgg                                                   >  7:60821/1‑144 (MQ=255)
                                                                                                   ttGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCTCGGCACGCACCAGCAACAGGCGTTTGAgg                                                   <  8:60821/144‑1 (MQ=255)
                                                                                                      ttCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGCCGGCGCGTTGTCCGGTGCATCCTCGGCACGCACCAGCAACATGCGTTTGAGGGTGCTGTc                                           >  6:15886/1‑149 (MQ=255)
                                                                                                      ttCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCTCGGCACGCACCAGCAACAGGCGTTTGAGGGTGCTGTc                                           >  7:74457/1‑149 (MQ=255)
                                                                                                              aTCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCt                                                                                       <  8:218363/97‑1 (MQ=255)
                                                                                                              aTCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCt                                                                                       >  7:218363/1‑97 (MQ=255)
                                                                                                                     accaccacGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCTCGGCACGCACCAGCAACAGGCGTTTGAGGGTGCTGTCCTGGCCCACAAAGtt                            <  3:22937/149‑1 (MQ=255)
                                                                                                                       caccacGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCTCGGCACGCACCAGCAACAGGCGTTTGAGGGTGCTGTCCTGGCCCACAAAGTTGc                          >  8:99170/1‑149 (MQ=255)
                                                                                                                       caccacGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCTCGGCACGCACCAGCAACAGGCGTTTGAGGGTGCTGTCCTGGCCCACAAAGTTGc                          >  5:107070/1‑149 (MQ=255)
                                                                                                                       caccacGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCTCGGCACGCACCAGCAACAGGCGTTTGAGGGTGCTGTCCTGGCCCACAAAGTTGc                          >  2:82466/1‑149 (MQ=255)
                                                                                                                         ccacGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCTCGGCACGCACCAGCAACAGGCGTTTGAGGGTGCTGTCCTGGCCCACAAAGTTGCTg                        <  2:94784/149‑1 (MQ=255)
                                                                                                                          cgcGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCTCGGCACGCACCAGCAACAGGCGTTTGAGGGTGCTGTCCTGGCCCACAAAGTTGCTGa                       <  1:45636/147‑1 (MQ=255)
                                                                                                                             gTAGCGGCGGTCGTGCACATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACCGCGCCTTGTCCGCTGCATCCTCGGCACGCACCAGCAACAGGCGTTTGAGGGGGCTGTACTGGCCCACAAAGTTGCTCACg                     >  6:95933/1‑148 (MQ=255)
                                                                                                                              tAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCTCGGCACGCACCAGCAACAGGCGTTTGAGGGTGCTGTCCTGGCCCACAAAGTTGCTGACGa                    >  5:225085/1‑148 (MQ=255)
                                                                                                                                gcggcgGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCTCGGCACGCACCAGCAACAGGCGTTTGAGGGTGCTGTCCTGGCCCACAAAGTTGCTGACGaaa                  <  1:82466/148‑1 (MQ=255)
                                                                                                                                  ggcggTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGGCCGCTGCATCCTCGGCACGCACCAGCAACAGGCGTTTGAGGGTGCTGTCCTGGCCCACAAAGTTGCTGACGAAatca               <  5:15886/149‑1 (MQ=255)
                                                                                                                                     ggTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCTCGGCACGCACCAGCAACAGGCGTTTGAGGGTGCTGTCCTGGCCCACAAAGTTGCTGACGAAATCATcc            <  8:104600/149‑1 (MQ=255)
                                                                                                                                            cTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCTCGGCACGCACCAGCAACAGGCGTTTGAGGGTGCTGTCCTGGCCCACAAAGTTGCTGACGAAATCATCCGCCGGGt     >  2:231657/1‑149 (MQ=255)
                                                                                                                                               aTCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCTCGGCACGCACCAGCAACAGGCGTTTGa                                                     >  7:56897/1‑98 (MQ=255)
                                                                                                                                               aTCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCTCGGCACGCACCAGCAACAGGCGTTTGa                                                     <  8:56897/98‑1 (MQ=255)
                                                                                                                                                  gAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCTCGGCACGCACCAGCAACAGGCGTTTGAGGGTGCTGTCCTGGCCCACAAAGTTGCTGACGAAATCATCCGCCGGGTgcg  <  2:323877/146‑1 (MQ=255)
                                                                                                                                                  gAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCTCGGCACGCACCAGCAACAGGCGTTTGAGGGTGCTGTCCTGGCCCACAAAGTTGCTGACGAAATCATCCGCCGGGTgcg  >  1:323877/1‑146 (MQ=255)
                                                                                                                                                    |                                                                                                                                               
TGCTCATCGTGCGACGCGGTGGCATTGAACGGCCGCAGGAAATCGCCACACGTCCCTTGCTGGCGGTGCATGTCGCGCCGGCGCACATAGCCCAGCGCCTTGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCTCGGCACGCACCAGCAACAGGCGTTTGAGGGTGCTGTCCTGGCCCACAAAGTTGCTGACGAAATCATCCGCCGGGTGCG  >  NC_002947/1007771‑1008062

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.