New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1007919 = | 41 (0.730) | 3 (0.060) | 3/248 | NT | 6.2% | coding (829/1158 nt) | yehX | ABC transporter ATP‑binding protein |
? | NC_002947 | 1007980 = | 51 (0.940) | coding (768/1158 nt) | yehX | ABC transporter ATP‑binding protein |
TGCTCATCGTGCGACGCGGTGGCATTGAACGGCCGCAGGAAATCGCCACACGTCCCTTGCTGGCGGTGCATGTCGCGCCGGCGCACATAGCCCAGCGCCTTGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCTCGGCACGCACCAGCAACAGGCGTTTGAGGGTGCTGTCCTGGCCCACAAAGTTGCTGACGAAATCATCCGCCGGGTGCG > NC_002947/1007771‑1008062 | tGCTCATCGTGCGACGCGGTGGCATTGAACGGCCGCAGGAAATCGCCACACGTCCCTTGCTGGCGGTGCATGTCGCGCCGGCGCACATAGCCCAGCGCCTTGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGag < 8:292328/149‑1 (MQ=255) ggTGGCATTGAACGGCCGCAGGAAATCGCCACACGTCCCTTGCTGGCGGTGCATGTCGCGCCGGCGCACATAGCCCAGCGCCTTGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGc < 6:247173/149‑1 (MQ=255) gTGGCATTGAACGGCCGCAGGAAATCGCCACACGTCCCTTGCTGGCGGTGCATGTCGCGCCGGCGCACATAGCCCAGCGCCTTGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGcc < 5:296405/149‑1 (MQ=255) gTGGCATTGAACGGCCGCAGGAAATCGCCACACGTCCCTTGCTGGCGGTGCATGTCGCGCCGGCGCACATAGCCCAGCGCCTTGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGcc < 3:172007/149‑1 (MQ=255) ttGAACGGCCGCAGGAAATCGCCACACGTCCCTTGCTGGCGGTGCATGTCGCGCCGGCGCACATAGCCCAGCGCCTTGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCgg > 7:104600/1‑149 (MQ=255) gAACGGCCGCAGGAAATCGCCACACGTCCCTTGCTGGCGGTGCATGTCGCGCCGGCGCACATAGCCCAGCGCCTTGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGgt < 6:114626/148‑1 (MQ=255) gAACGGCCGCAGGAAATCGCCACACGTCCCTTGCTGGCGGTGCATGTCGCGCCGGCGCACATAGCCCAGCGCCTTGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGgt < 6:136341/148‑1 (MQ=255) aCGGCCGCAGGAAATCGCCACACGTCCCTTGCTGGCGGTGCATGTCGCGCCGGCGCACATAGCCCAGCGCCTTGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGtt > 3:94091/1‑149 (MQ=255) gCAGGAAATCGCCACACGTCCCTTGCTGGCGGTGCATGTCGCGCCGGCGCACATAGCCCAGCGCCTTGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCggg > 5:328467/1‑149 (MQ=255) gCAGGAAATCGCCACACGTCCCTTGCTGGCGGTGCATGGCGCGCCGGCGCACATAGCCCAGCGCCTTGTGCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCggg < 5:118437/149‑1 (MQ=255) tCCCTTGCTGGCGGTGCATGTCGCGCCGGCGCACATAGCCCAGCGCCTTGTTCTGCGCATCGGTCACCACCGCGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTg > 2:45636/1‑149 (MQ=255) cccTTGCTGGCGGTGCATGTCGCGCCGGCGCACATAGCCCAGCGCCTTGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGt > 4:320170/1‑149 (MQ=255) cTTGCTGGCGGTGCATGTCGCGCCGGCGCACATAGCCCAGCGCCTTGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCggg < 7:332854/128‑1 (MQ=255) cTTGCTGGCGGTGCATGTCGCGCCGGCGCACATAGCCCAGCGCCTTGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCggg > 8:332854/1‑128 (MQ=255) cTGGCGGTGCATGTCGCGCCGGCGCACATAGCCCAGCGCCTTGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTg < 8:91169/149‑1 (MQ=255) gcgcacccggcggatgatttcgtcagcaactttgtgggccaggacagcaccctcaaacgcctgttgctggtgcgtgccgaggatGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATc > 4:226697‑M1/85‑148 (MQ=255) aTGTCGCGCCGGCGCACATAGCCCAGCGCCTTGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCt > 1:97024/1‑138 (MQ=255) aTGTCGCGCCGGCGCACATAGCCCAGCGCCTTGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCt < 2:97024/138‑1 (MQ=255) gcgcCGGCGCACATAGCCCAGCGCCTTGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGtt < 8:289112/126‑1 (MQ=255) cgcCGGCGCACATAGCCCAGCGCCTTGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCTCGgcacgcac < 8:108735/149‑1 (MQ=255) gcCGGCGCACATAGCCCAGCGCCTTGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCTCGgcacgcac > 1:94784/1‑148 (MQ=255) tcgtcagcaactttgtgggccaggacagcaccctcaaacgcctgttgctggtgcgtgccgaggatGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCt < 6:98050‑M1/66‑1 (MQ=255) tcgtcagcaactttgtgggccaggacagcaccctcaaacgcctgttgctggtgcgtgccgaggatGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCt > 5:98050‑M1/66‑131 (MQ=255) aTAGCCCAGCGCCTTGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCTCGGCACGCACCAGCAACAGGc > 4:22937/1‑149 (MQ=255) aTAGCCCAGCGCCTTGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTACGCTGCATCCTCGGCACGCACCAGCAACAGGc < 4:94091/149‑1 (MQ=255) cAGCGCCTTGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCTCGGCACGCACCAGCAACAGGCGttt > 1:27200/1‑147 (MQ=255) gcgcCTTGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCTCGGCACGCACCAGCAACAGGCGTTTGAgg < 3:320170/149‑1 (MQ=255) ttGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCTCGGCACGCACCAGCAACAGGCGTTTGAgg > 7:60821/1‑144 (MQ=255) ttGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCTCGGCACGCACCAGCAACAGGCGTTTGAgg < 8:60821/144‑1 (MQ=255) ttCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGCCGGCGCGTTGTCCGGTGCATCCTCGGCACGCACCAGCAACATGCGTTTGAGGGTGCTGTc > 6:15886/1‑149 (MQ=255) ttCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCTCGGCACGCACCAGCAACAGGCGTTTGAGGGTGCTGTc > 7:74457/1‑149 (MQ=255) aTCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCt < 8:218363/97‑1 (MQ=255) aTCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCt > 7:218363/1‑97 (MQ=255) accaccacGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCTCGGCACGCACCAGCAACAGGCGTTTGAGGGTGCTGTCCTGGCCCACAAAGtt < 3:22937/149‑1 (MQ=255) caccacGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCTCGGCACGCACCAGCAACAGGCGTTTGAGGGTGCTGTCCTGGCCCACAAAGTTGc > 8:99170/1‑149 (MQ=255) caccacGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCTCGGCACGCACCAGCAACAGGCGTTTGAGGGTGCTGTCCTGGCCCACAAAGTTGc > 5:107070/1‑149 (MQ=255) caccacGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCTCGGCACGCACCAGCAACAGGCGTTTGAGGGTGCTGTCCTGGCCCACAAAGTTGc > 2:82466/1‑149 (MQ=255) ccacGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCTCGGCACGCACCAGCAACAGGCGTTTGAGGGTGCTGTCCTGGCCCACAAAGTTGCTg < 2:94784/149‑1 (MQ=255) cgcGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCTCGGCACGCACCAGCAACAGGCGTTTGAGGGTGCTGTCCTGGCCCACAAAGTTGCTGa < 1:45636/147‑1 (MQ=255) gTAGCGGCGGTCGTGCACATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACCGCGCCTTGTCCGCTGCATCCTCGGCACGCACCAGCAACAGGCGTTTGAGGGGGCTGTACTGGCCCACAAAGTTGCTCACg > 6:95933/1‑148 (MQ=255) tAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCTCGGCACGCACCAGCAACAGGCGTTTGAGGGTGCTGTCCTGGCCCACAAAGTTGCTGACGa > 5:225085/1‑148 (MQ=255) gcggcgGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCTCGGCACGCACCAGCAACAGGCGTTTGAGGGTGCTGTCCTGGCCCACAAAGTTGCTGACGaaa < 1:82466/148‑1 (MQ=255) ggcggTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGGCCGCTGCATCCTCGGCACGCACCAGCAACAGGCGTTTGAGGGTGCTGTCCTGGCCCACAAAGTTGCTGACGAAatca < 5:15886/149‑1 (MQ=255) ggTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCTCGGCACGCACCAGCAACAGGCGTTTGAGGGTGCTGTCCTGGCCCACAAAGTTGCTGACGAAATCATcc < 8:104600/149‑1 (MQ=255) cTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCTCGGCACGCACCAGCAACAGGCGTTTGAGGGTGCTGTCCTGGCCCACAAAGTTGCTGACGAAATCATCCGCCGGGt > 2:231657/1‑149 (MQ=255) aTCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCTCGGCACGCACCAGCAACAGGCGTTTGa > 7:56897/1‑98 (MQ=255) aTCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCTCGGCACGCACCAGCAACAGGCGTTTGa < 8:56897/98‑1 (MQ=255) gAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCTCGGCACGCACCAGCAACAGGCGTTTGAGGGTGCTGTCCTGGCCCACAAAGTTGCTGACGAAATCATCCGCCGGGTgcg < 2:323877/146‑1 (MQ=255) gAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCTCGGCACGCACCAGCAACAGGCGTTTGAGGGTGCTGTCCTGGCCCACAAAGTTGCTGACGAAATCATCCGCCGGGTgcg > 1:323877/1‑146 (MQ=255) | TGCTCATCGTGCGACGCGGTGGCATTGAACGGCCGCAGGAAATCGCCACACGTCCCTTGCTGGCGGTGCATGTCGCGCCGGCGCACATAGCCCAGCGCCTTGTTCTGCGCATCGGTCACCACCACGTAGCGGCGGTCGTGCTCATCGAGCAGCTCCAGCGCGTCGCCCACCGGTGTTTCCGGGCTCACCGACGGCGCGTTGTCCGCTGCATCCTCGGCACGCACCAGCAACAGGCGTTTGAGGGTGCTGTCCTGGCCCACAAAGTTGCTGACGAAATCATCCGCCGGGTGCG > NC_002947/1007771‑1008062 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |